Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.3e-56 223.4 162 100.0
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.2e-43 180.3 117 82.1
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 1.5e-33 146.7 126 74.6
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 2.5e-28 129.4 125 65.6
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 4.4e-25 118.6 116 60.3
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.8e-18 96.7 122 51.6
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 4.4e-17 92.0 122 50.8
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 1.7e-16 90.1 122 50.0
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.8e-16 89.4 126 47.6
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 8.3e-16 87.8 123 45.5
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.4e-15 87.0 109 51.4
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.4e-15 86.3 126 46.8
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 3.1e-15 85.9 116 47.4
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 3.1e-15 85.9 126 47.6
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 3.1e-15 85.9 127 45.7
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 5.4e-15 85.1 115 48.7
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 9.1e-15 84.3 124 46.0
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 1.2e-14 84.0 121 46.3
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 1.6e-14 83.6 115 45.2
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 2.7e-14 82.8 126 44.4
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 3.8e-13 79.0 132 48.5
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 6.5e-13 78.2 134 47.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 6.5e-13 78.2 125 40.0
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 6.5e-13 78.2 125 42.4
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 8.5e-13 77.8 124 40.3
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.5e-13 77.8 125 40.0
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.9e-12 76.6 121 39.7
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.5e-12 76.3 121 38.8
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 3.2e-12 75.9 121 41.3
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 7.2e-12 74.7 126 39.7
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 7.2e-12 74.7 121 38.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.5e-12 74.3 121 38.0
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 9.5e-12 74.3 120 40.0
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 1.2e-11 73.9 121 39.7
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 2.1e-11 73.2 133 38.3
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.7e-11 72.8 125 39.2
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.6e-11 72.4 118 45.8
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 3.6e-11 72.4 113 42.5
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 6.1e-11 71.6 132 37.1
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 6.1e-11 71.6 110 41.8
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 8.0e-11 71.2 128 36.7
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 2.3e-10 69.7 116 38.8
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 3.0e-10 69.3 125 40.8
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 3.0e-10 69.3 103 41.7
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.0e-10 68.9 104 39.4
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 4.0e-10 68.9 122 38.5
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 6.8e-10 68.2 114 42.1
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 8.8e-10 67.8 124 38.7
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.5e-09 67.0 123 40.7
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.5e-09 67.0 114 38.6
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 3.4e-09 65.9 118 39.0
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 4.4e-09 65.5 129 34.9
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 9.8e-09 64.3 114 37.7
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 9.8e-09 64.3 118 37.3
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 9.8e-09 64.3 130 33.8
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.2e-08 63.2 137 34.3
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.2e-08 63.2 131 32.8
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 2.8e-08 62.8 120 36.7
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 2.8e-08 62.8 110 40.0
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 2.8e-08 62.8 110 40.0
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.7e-08 62.4 120 41.7
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 3.7e-08 62.4 108 38.0
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 6.3e-08 61.6 122 37.7
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.4e-07 60.5 123 36.6
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 1.8e-07 60.1 120 33.3
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 2.4e-07 59.7 121 33.1
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 3.1e-07 59.3 122 37.7
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 4.1e-07 58.9 113 40.7
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 4.1e-07 58.9 118 38.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.1e-07 58.9 107 37.4
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 9.2e-07 57.8 113 36.3
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 9.2e-07 57.8 122 36.1
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 9.2e-07 57.8 119 38.7
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 9.2e-07 57.8 119 37.8
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.6e-06 57.0 108 40.7
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.6e-06 57.0 132 36.4
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 2.0e-06 56.6 126 37.3
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.7e-06 56.2 131 30.5
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 4.5e-06 55.5 109 33.9
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 5.9e-06 55.1 111 45.0
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 5.9e-06 55.1 117 36.8
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 5.9e-06 55.1 119 32.8
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 7.7e-06 54.7 130 35.4
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 7.7e-06 54.7 112 34.8


User provided reference genes

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