Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G126400 Phaseolus vulgaris HOM05D000699 ORTHO05D000519 2.1e-46 190.3 91 100.0
arahy.Tifrunner.gnm1.ann1.9BC1I1 Arachis hypogaea HOM05D000699 ORTHO05D000519 3.2e-31 139.8 90 74.4
arahy.Tifrunner.gnm1.ann1.AR92CS Arachis hypogaea HOM05D000699 ORTHO05D000519 7.2e-31 138.7 90 74.4
Medtr2g030825 Medicago truncatula HOM05D000699 ORTHO05D000519 3.7e-27 126.3 89 73.0
Medtr2g030845 Medicago truncatula HOM05D000699 ORTHO05D000519 3.7e-27 126.3 89 73.0
MD05G1087500 Malus domestica HOM05D000699 ORTHO05D000519 4.1e-26 122.9 84 69.0
ClCG02G006230 Citrullus lanatus HOM05D000699 ORTHO05D000519 7.7e-25 118.6 87 69.0
Prupe.8G132700 Prunus persica HOM05D000699 ORTHO05D000519 7.7e-25 118.6 86 66.3
Lj9A321T82 Lonicera japonica HOM05D000699 ORTHO05D000519 2.2e-24 117.1 80 68.8
THA.LOC104825374 Tarenaya hassleriana HOM05D000699 ORTHO05D000519 6.5e-24 115.5 81 67.9
Oeu013736.1 Olea europaea HOM05D000699 ORTHO05D000519 8.5e-24 115.2 93 63.4
Sed0016996 Sechium edule HOM05D000699 ORTHO05D000519 1.9e-23 114.0 94 61.7
CsaV3_7G008300 Cucumis sativus L. HOM05D000699 ORTHO05D000519 2.5e-23 113.6 72 73.6
TPR.G27827 Trifolium pratense HOM05D000699 ORTHO05D000519 3.2e-23 113.2 82 68.3
FvH4_2g05430 Fragaria vesca HOM05D000699 ORTHO05D000519 5.5e-23 112.5 56 83.9
FAN24G2436 Fragaria x ananassa HOM05D000699 ORTHO05D000519 7.2e-23 112.1 79 67.1
SGA_v2.0_scaffold225G43085 Striga asiatica HOM05D000699 ORTHO05D000519 7.2e-23 112.1 84 69.0
MELO3C018477.2 Cucumis melo HOM05D000699 ORTHO05D000519 4.6e-22 109.4 59 81.4
AUR62013253 Chenopodium quinoa HOM05D000699 ORTHO05D000519 7.9e-22 108.6 66 75.8
AT3G19430 Arabidopsis thaliana HOM05D000699 ORTHO05D000519 3.9e-21 106.3 48 91.7
AL3G32840 Arabidopsis lyrata HOM05D000699 ORTHO05D000519 8.8e-21 105.1 83 62.7
CARHR094830 Cardamine hirsuta HOM05D000699 ORTHO05D000519 1.1e-20 104.8 58 81.0
DCAR_003946 Daucus carota HOM05D000699 ORTHO05D000519 3.3e-20 103.2 83 62.7
BcaC05g28476 Brassica carinata HOM05D000699 ORTHO05D000519 4.3e-20 102.8 76 69.7
A05p30180 Brassica napus HOM05D000699 ORTHO05D000519 4.3e-20 102.8 76 69.7
C05p45610 Brassica napus HOM05D000699 ORTHO05D000519 4.3e-20 102.8 76 69.7
BolC5t33285H Brassica oleracea HOM05D000699 ORTHO05D000519 4.3e-20 102.8 76 69.7
BraA05t21858Z Brassica rapa HOM05D000699 ORTHO05D000519 4.3e-20 102.8 76 69.7
Thhalv10022024m.g Eutrema salsugineum HOM05D000699 ORTHO05D000519 5.7e-20 102.4 58 79.3
Medtr2g021580 Medicago truncatula HOM05D000699 ORTHO05D000519 7.4e-20 102.1 73 71.2
Psat1g165640 Pisum sativum HOM05D000699 ORTHO05D000519 9.7e-20 101.7 74 67.6
AUR62006030 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.7e-19 100.9 48 89.6
EL10Ac9g22303 Beta vulgaris HOM05D000699 ORTHO05D000519 2.2e-19 100.5 68 69.1
HanXRQChr10g0291481 Helianthus annuus HOM05D000699 ORTHO05D000519 2.8e-19 100.1 93 57.0
BcaB06g26002 Brassica carinata HOM05D000699 ORTHO05D000519 1.1e-18 98.2 79 67.1
A01p35230 Brassica napus HOM05D000699 ORTHO05D000519 1.4e-18 97.8 76 65.8
BraA01t03604Z Brassica rapa HOM05D000699 ORTHO05D000519 1.4e-18 97.8 76 65.8
AUR62035598 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.4e-18 97.8 72 66.7
BcaC09g48896 Brassica carinata HOM05D000699 ORTHO05D000519 1.8e-18 97.4 83 62.7
BcaC09g48897 Brassica carinata HOM05D000699 ORTHO05D000519 1.8e-18 97.4 83 62.7
C01p44670 Brassica napus HOM05D000699 ORTHO05D000519 1.8e-18 97.4 83 62.7
BolC1t04436H Brassica oleracea HOM05D000699 ORTHO05D000519 1.8e-18 97.4 83 62.7
HanXRQChr16g0509871 Helianthus annuus HOM05D000699 ORTHO05D000519 2.4e-18 97.1 80 58.8
HanXRQChr16g0509881 Helianthus annuus HOM05D000699 ORTHO05D000519 2.4e-18 97.1 80 58.8
BcaB04g20704 Brassica carinata HOM05D000699 ORTHO05D000519 5.3e-18 95.9 82 62.2
Medtr2g030835 Medicago truncatula HOM05D000699 ORTHO05D000519 5.3e-18 95.9 72 65.3
AUR62023735 Chenopodium quinoa HOM05D000699 ORTHO05D000519 6.9e-18 95.5 62 66.1
Peaxi162Scf00152g00239 Petunia axillaris HOM05D000699 ORTHO05D000519 1.2e-17 94.7 73 58.9
CAN.G1231.16 Capsicum annuum HOM05D000699 ORTHO05D000519 3.4e-17 93.2 91 50.5
HanXRQChr16g0510081 Helianthus annuus HOM05D000699 ORTHO05D000519 3.4e-17 93.2 62 64.5
HanXRQChr16g0510091 Helianthus annuus HOM05D000699 ORTHO05D000519 3.4e-17 93.2 62 64.5
QL11p034220 Quercus lobata HOM05D000699 ORTHO05D000519 3.4e-17 93.2 76 59.2
HanXRQChr16g0510061 Helianthus annuus HOM05D000699 ORTHO05D000519 4.5e-17 92.8 65 67.7
Lsat_1_v5_gn_3_95940 Lactuca sativa HOM05D000699 ORTHO05D000519 4.5e-17 92.8 84 56.0
Peaxi162Scf00152g00132 Petunia axillaris HOM05D000699 ORTHO05D000519 4.5e-17 92.8 81 55.6
AUR62028849 Chenopodium quinoa HOM05D000699 ORTHO05D000519 7.7e-17 92.0 70 58.6
ECA236G1996 Erigeron canadensis HOM05D000699 ORTHO05D000519 7.7e-17 92.0 90 56.7
Lsat_1_v5_gn_7_86261 Lactuca sativa HOM05D000699 ORTHO05D000519 1.3e-16 91.3 81 56.8
EL10Ac3g05208 Beta vulgaris HOM05D000699 ORTHO05D000519 1.7e-16 90.9 86 54.7
Lsat_1_v5_gn_7_86641 Lactuca sativa HOM05D000699 ORTHO05D000519 2.2e-16 90.5 80 57.5
Atru.chr5.2593 Acer truncatum HOM05D000699 ORTHO05D000519 2.9e-16 90.1 87 56.3
PGR042G0840 Punica granatum HOM05D000699 ORTHO05D000519 3.8e-16 89.7 84 56.0
Lsat_1_v5_gn_7_86221 Lactuca sativa HOM05D000699 ORTHO05D000519 5.0e-16 89.4 86 54.7
Lsat_1_v5_gn_7_86661 Lactuca sativa HOM05D000699 ORTHO05D000519 5.0e-16 89.4 86 54.7
Solyc01g107720.3 Solanum lycopersicum HOM05D000699 ORTHO05D000519 6.5e-16 89.0 80 53.8
HanXRQChr16g0510031 Helianthus annuus HOM05D000699 ORTHO05D000519 8.5e-16 88.6 85 51.8
Nitab4.5_0000292g0090 Nicotiana tabacum HOM05D000699 ORTHO05D000519 1.1e-15 88.2 70 57.1
Nitab4.5_0000436g0100 Nicotiana tabacum HOM05D000699 ORTHO05D000519 1.1e-15 88.2 88 48.9
CAN.G1231.15 Capsicum annuum HOM05D000699 ORTHO05D000519 2.5e-15 87.0 74 54.1
TAR633G2749 Trochodendron aralioides HOM05D000699 ORTHO05D000519 3.2e-15 86.7 79 60.8
Sopen01g049900 Solanum pennellii HOM05D000699 ORTHO05D000519 5.5e-15 85.9 65 56.9
PGSC0003DMG400021585 Solanum tuberosum HOM05D000699 ORTHO05D000519 7.2e-15 85.5 84 51.2
PGSC0003DMG400025775 Solanum tuberosum HOM05D000699 ORTHO05D000519 7.2e-15 85.5 64 57.8
Sopen11g030790 Solanum pennellii HOM05D000699 ORTHO05D000519 1.6e-14 84.3 85 50.6
Solyc11g073140.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 4.7e-14 82.8 85 50.6
Sopen01g049890 Solanum pennellii HOM05D000699 ORTHO05D000519 4.7e-14 82.8 67 55.2
Sopen04g030430 Solanum pennellii HOM05D000699 ORTHO05D000519 7.9e-14 82.0 82 51.2
ECA236G1582 Erigeron canadensis HOM05D000699 ORTHO05D000519 1.0e-13 81.6 71 54.9
Solyc01g107710.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 1.0e-13 81.6 71 57.7
HanXRQChr16g0509861 Helianthus annuus HOM05D000699 ORTHO05D000519 1.4e-13 81.3 73 50.7
PGSC0003DMG400025774 Solanum tuberosum HOM05D000699 ORTHO05D000519 1.4e-13 81.3 72 56.9
Aa31LG8G6180 Aethionema arabicum HOM05D000699 ORTHO05D000519 1.8e-13 80.9 65 60.0
Peaxi162Scf00016g02253 Petunia axillaris HOM05D000699 ORTHO05D000519 1.1e-12 78.2 62 58.1
Ah.01g010790 Amaranthus hybridus HOM05D000182 ORTHO05D000112 4.4e-12 76.3 43 81.4
PSO724G0461 Papaver somniferum HOM05D000699 ORTHO05D000519 1.7e-11 74.3 74 50.0
Ah.01g018050 Amaranthus hybridus HOM05D000699 ORTHO05D000519 2.8e-11 73.6 42 76.2
PSO729G0179 Papaver somniferum HOM05D000699 ORTHO05D000519 3.7e-11 73.2 60 53.3
Potri.009G097400 Populus trichocarpa HOM05D000699 ORTHO05D000519 3.7e-11 73.2 69 47.8
PSO170G0806 Papaver somniferum HOM05D000699 ORTHO05D000519 6.3e-11 72.4 87 44.8
PSO170G6907 Papaver somniferum HOM05D000699 ORTHO05D000519 6.3e-11 72.4 87 44.8
PSO302G0231 Papaver somniferum HOM05D000699 ORTHO05D000519 8.2e-11 72.0 87 44.8
Sp3g17490 Schrenkiella parvula HOM05D000699 ORTHO05D000519 1.4e-10 71.2 38 76.3
PSO541G5354 Papaver somniferum HOM05D000699 ORTHO05D000519 1.8e-10 70.9 81 48.1
Lj6g0018886 Lotus japonicus HOM05D000699 ORTHO05D000519 9.1e-10 68.6 74 50.0
PSO675G3610 Papaver somniferum HOM05D000699 ORTHO05D000519 3.5e-09 66.6 91 46.2
EL10Ac9g22304 Beta vulgaris HOM05D000699 ORTHO05D000519 1.0e-08 65.1 43 67.4
MBI17_g31311_MAGBIO Magnolia biondii HOM05D000699 ORTHO05D000519 1.3e-08 64.7 72 45.8
Solyc06g034130.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 1.3e-08 64.7 82 45.1
EL10Ac9g22305 Beta vulgaris HOM05D000699 ORTHO05D000519 2.2e-08 63.9 50 52.0
AUR62016785 Chenopodium quinoa HOM05D000699 ORTHO05D000519 2.9e-08 63.5 43 62.8
TAR369G0225 Trochodendron aralioides HOM05D000699 ORTHO05D000519 1.9e-07 60.8 60 43.3
Ca_00866_v3 Cicer arietinum L. HOM05D000699 ORTHO05D000519 3.2e-07 60.1 81 43.2
PSO782G2038 Papaver somniferum HOM05D000699 ORTHO05D000519 2.1e-06 57.4 57 52.6
Prupe.6G124900 Prunus persica HOM05D000699 ORTHO05D000519 2.1e-06 57.4 35 54.3
PSO384G2053 Papaver somniferum HOM05D000699 ORTHO05D000519 4.7e-06 56.2 64 40.6
CSS0047489 Camellia sinensis var. sinensis HOM05D000699 ORTHO05D000519 6.1e-06 55.8 37 54.1
Dinv29450 Davidia involucrata HOM05D000699 ORTHO05D000519 6.1e-06 55.8 40 47.5
FvH4_5g10780 Fragaria vesca HOM05D000699 ORTHO05D000519 6.1e-06 55.8 47 42.6
FAN18G0510 Fragaria x ananassa HOM05D000699 ORTHO05D000519 8.0e-06 55.5 47 42.6


User provided reference genes

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