Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 2.4e-97 359.4 263 100.0
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 3.7e-58 229.2 259 75.3
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 1.3e-50 204.1 259 72.6
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 1.2e-40 171.0 239 74.1
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 2.7e-40 169.9 256 64.1
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 8.1e-37 158.3 256 66.0
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 3.4e-35 152.9 243 64.6
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 7.6e-35 151.8 255 65.9
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 1.1e-33 147.9 247 66.4
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 2.2e-26 123.6 254 59.8
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 2.2e-26 123.6 254 59.8
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 3.2e-25 119.8 251 57.8
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 2.1e-24 117.1 251 60.6
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 2.3e-23 113.6 256 61.7
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 6.6e-23 112.1 253 53.8
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 9.6e-22 108.2 251 57.8
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 4.8e-21 105.9 249 53.8
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 4.8e-21 105.9 250 58.0
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 6.2e-21 105.5 251 43.4
Lalb_Chr20g0120751 Lupinus albus HOM05D007634 ORTHO05D004310 8.1e-21 105.1 237 54.9
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.4e-20 104.4 253 53.0
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 3.1e-20 103.2 254 53.5
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 3.1e-20 103.2 254 55.5
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 6.9e-20 102.1 248 52.8
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 2.0e-19 100.5 237 57.0
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 2.6e-19 100.1 253 52.6
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 5.8e-19 99.0 248 52.4
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.3e-18 97.8 253 51.4
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 1.4e-17 94.4 261 52.9
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 1.9e-17 94.0 236 58.5
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 2.4e-17 93.6 233 57.1
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 4.2e-17 92.8 239 59.8
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.3e-15 87.8 244 52.0
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.3e-15 87.0 248 50.4
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 5.1e-15 85.9 245 51.8
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 8.7e-15 85.1 246 55.7
Psat4g021760 Pisum sativum HOM05D007634 ORTHO05D004310 2.1e-13 80.5 248 48.8
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 3.7e-13 79.7 248 49.6
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.8e-12 77.4 251 51.8
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 2.4e-12 77.0 208 59.1
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.4e-12 77.0 248 48.4
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 4.0e-12 76.3 208 59.1
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 4.0e-12 76.3 246 51.6
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 9.0e-12 75.1 81 54.3
Ca_21412_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 1.2e-11 74.7 247 53.4
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 1.2e-11 74.7 245 52.2
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 2.0e-11 73.9 78 52.6
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 7.6e-11 72.0 81 53.1
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 9.9e-11 71.6 78 51.3
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.7e-10 70.9 78 47.4
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 4.9e-10 69.3 199 56.8
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 4.9e-10 69.3 78 50.0
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 4.9e-10 69.3 242 43.4
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 6.4e-10 68.9 248 49.2
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.4e-09 67.8 233 53.6
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 3.2e-09 66.6 286 42.0
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 7.1e-09 65.5 78 48.7
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 9.3e-09 65.1 238 42.0
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 1.2e-08 64.7 248 51.2
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 1.6e-08 64.3 228 52.2
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 2.1e-08 63.9 255 47.8
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 4.6e-08 62.8 79 50.6
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 6.0e-08 62.4 71 43.7
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.0e-07 61.6 73 49.3
Lsat_1_v5_gn_6_116040 Lactuca sativa HOM05D031577 ORTHO05D004310 1.0e-07 61.6 74 48.6
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 1.0e-07 61.6 79 49.4
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 1.3e-07 61.2 247 35.6
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 1.8e-07 60.8 75 48.0
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 2.3e-07 60.5 81 50.6
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 3.0e-07 60.1 243 42.4
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 3.9e-07 59.7 80 46.2
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 3.9e-07 59.7 245 48.6
Glyma.17G035900 Glycine max HOM05D007634 ORTHO05D004310 3.9e-07 59.7 116 41.4
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 3.9e-07 59.7 244 48.4
ECA246G0838 Erigeron canadensis HOM05D031577 ORTHO05D004310 1.9e-06 57.4 74 40.5
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 1.9e-06 57.4 70 50.0
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.9e-06 57.4 87 43.7
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 2.5e-06 57.0 242 50.0
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 5.6e-06 55.8 73 47.9
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 5.6e-06 55.8 73 47.9
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 5.6e-06 55.8 70 48.6
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 7.4e-06 55.5 244 48.0


User provided reference genes

Program Settings