Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 1.5e-253 879.0 442 100.0
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 3.7e-236 821.2 440 92.3
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 3.3e-216 755.0 444 86.9
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 9.6e-192 673.7 439 78.6
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 8.1e-191 670.6 444 77.9
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 1.9e-187 659.4 446 77.6
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 2.1e-186 656.0 443 78.3
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 7.4e-184 647.5 443 76.1
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 9.6e-184 647.1 446 75.8
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 8.2e-183 644.0 451 75.2
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 5.0e-164 581.6 417 69.8
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 1.4e-163 580.1 412 71.4
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 2.0e-160 569.7 403 71.0
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 7.4e-160 567.8 477 65.6
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 4.8e-159 565.1 388 73.7
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.3e-156 557.0 414 66.9
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.4e-155 553.5 416 66.8
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 7.2e-155 551.2 417 67.4
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 4.7e-154 548.5 396 69.4
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 1.4e-153 547.0 396 69.4
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.3e-152 542.3 402 67.7
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 5.7e-152 541.6 395 68.9
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 9.7e-152 540.8 444 62.6
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.3e-151 540.4 441 62.8
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 2.8e-151 539.3 415 63.6
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 1.8e-150 536.6 423 65.2
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 3.1e-150 535.8 409 64.8
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 9.1e-150 534.3 447 62.0
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 7.7e-149 531.2 416 65.4
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.0e-148 530.8 355 75.5
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 1.0e-148 530.8 413 67.1
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 1.1e-147 527.3 425 63.8
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 4.2e-147 525.4 392 68.4
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.8e-145 520.0 416 66.8
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 2.3e-145 519.6 393 66.2
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 3.0e-145 519.2 388 65.5
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.2e-144 517.3 407 65.1
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 1.5e-144 516.9 442 61.8
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 2.6e-144 516.2 399 66.2
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 1.7e-143 513.5 414 62.8
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 2.2e-143 513.1 389 65.6
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 1.1e-142 510.8 433 61.7
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 5.3e-142 508.4 439 58.5
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 9.1e-142 507.7 399 63.7
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.2e-141 507.3 399 63.7
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.6e-141 506.9 412 63.1
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 1.0e-140 504.2 408 62.3
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.3e-140 503.8 398 62.6
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 8.0e-138 494.6 382 64.4
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 2.3e-137 493.0 395 63.3
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 5.2e-137 491.9 393 63.9
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 6.8e-137 491.5 393 62.3
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 1.3e-135 487.3 372 65.6
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 1.2e-133 480.7 437 57.4
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 3.5e-133 479.2 338 73.1
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 2.1e-130 469.9 341 70.1
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.8e-130 469.5 414 59.4
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.8e-129 466.8 409 58.9
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 5.7e-128 461.8 374 62.0
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 9.8e-128 461.1 372 62.6
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 2.4e-126 456.4 418 57.7
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.2e-122 444.1 442 55.0
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 4.7e-122 442.2 407 57.7
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 4.4e-120 435.6 417 56.8
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 2.2e-119 433.3 303 69.3
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 8.0e-114 414.8 347 61.1
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 4.0e-113 412.5 306 67.6
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 4.1e-110 402.5 440 54.1
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 1.6e-109 400.6 408 52.7
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 3.9e-108 396.0 304 66.4
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 4.7e-106 389.0 422 51.2
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 8.9e-105 384.8 288 64.9
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 3.5e-101 372.9 388 52.8
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 1.3e-100 370.9 289 64.0
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.0e-92 344.7 304 55.6
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 8.7e-92 341.7 367 49.6
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 1.3e-90 337.8 381 47.8
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 3.6e-90 336.3 426 48.6
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 6.4e-79 298.9 205 69.8
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 7.1e-78 295.4 198 72.2
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 2.1e-77 293.9 247 57.9
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 7.9e-77 292.0 280 53.9
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 6.2e-74 282.3 452 38.9
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.0e-72 277.3 219 68.9
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 1.0e-71 275.0 415 39.5
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 2.9e-63 246.9 321 47.0
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 3.2e-62 243.4 186 69.4
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 4.2e-62 243.0 237 53.6
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 3.9e-52 209.9 129 83.7
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 3.1e-49 200.3 130 73.8
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.7e-39 167.9 127 69.3
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 2.4e-33 147.5 123 60.2
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.7e-29 134.0 113 61.1
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 9.8e-27 125.6 127 56.7
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 8.3e-26 122.5 129 50.4
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 7.7e-24 115.9 84 72.6
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.7e-21 107.5 130 45.4
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.7e-21 107.5 130 45.4
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 5.2e-20 103.2 106 51.9
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 6.8e-20 102.8 62 80.6
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 5.0e-15 86.7 69 65.2
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 3.3e-14 84.0 89 52.8
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.7e-10 71.6 39 92.3
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 5.4e-09 66.6 61 62.3
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 3.0e-07 60.8 57 56.1


User provided reference genes

Program Settings