Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G103600 Phaseolus vulgaris HOM05D007517 ORTHO05D006922 3.9e-47 191.0 92 100.0
Glyma.03G248900 Glycine max HOM05D007517 ORTHO05D006922 1.6e-27 125.9 93 74.2
Glyma.19G246500 Glycine max HOM05D007517 ORTHO05D006922 2.2e-26 122.1 89 74.2
Lj1g0011629 Lotus japonicus HOM05D007517 ORTHO05D006922 2.8e-21 105.1 85 61.2
Phvul.007G189000 Phaseolus vulgaris HOM05D007517 ORTHO05D006922 1.2e-14 83.2 76 57.9
Lalb_Chr21g0311071 Lupinus albus HOM05D007517 ORTHO05D006922 2.8e-13 78.6 85 49.4
Glyma.20G226400 Glycine max HOM05D007517 ORTHO05D006922 6.3e-13 77.4 87 54.0
Medtr7g115360 Medicago truncatula HOM05D007517 ORTHO05D006922 6.3e-13 77.4 93 48.4
Duzib133G0625 Durio zibethinus HOM05D007517 ORTHO05D006922 4.1e-12 74.7 80 48.8
Sabra13G0040000 Salix brachista HOM05D007517 ORTHO05D006922 5.4e-12 74.3 81 45.7
Sabra13G0040100 Salix brachista HOM05D007517 ORTHO05D006922 5.4e-12 74.3 81 45.7
Sabra13G0040200 Salix brachista HOM05D007517 ORTHO05D006922 5.4e-12 74.3 81 45.7
Sabra13G0040300 Salix brachista HOM05D007517 ORTHO05D006922 5.4e-12 74.3 81 45.7
Thecc.01G263600 Theobroma cacao HOM05D007517 ORTHO05D006922 7.0e-12 73.9 91 44.0
Cpa.g.sc162.5 Carica papaya HOM05D007517 ORTHO05D006922 1.2e-11 73.2 68 52.9
Glyma.10G164000 Glycine max HOM05D007517 ORTHO05D006922 1.6e-11 72.8 87 52.9
Medtr1g080510 Medicago truncatula HOM05D007517 ORTHO05D006922 1.6e-11 72.8 82 48.8
Sabra13G0039900 Salix brachista HOM05D007517 ORTHO05D006922 4.5e-11 71.2 81 44.4
Potri.013G043600 Populus trichocarpa HOM05D007517 ORTHO05D006922 2.3e-10 68.9 81 43.2
Potri.019G013000 Populus trichocarpa HOM05D007517 ORTHO05D006922 2.3e-10 68.9 64 51.6
Lalb_Chr18g0043981 Lupinus albus HOM05D007517 ORTHO05D006922 2.9e-10 68.6 54 64.8
Aqoxy5G00299 Aquilegia oxysepala HOM05D007517 ORTHO05D006922 3.8e-10 68.2 77 44.2
QL10p016305 Quercus lobata HOM05D007517 ORTHO05D006922 3.8e-10 68.2 67 52.2
TPR.G27065 Trifolium pratense HOM05D007517 ORTHO05D006922 6.6e-10 67.4 87 47.1
Dinv44645 Davidia involucrata HOM05D007517 ORTHO05D006922 1.1e-09 66.6 80 45.0
Gohir.D08G070066 Gossypium hirsutum HOM05D007517 ORTHO05D006922 1.9e-09 65.9 65 50.8
Potri.019G012700 Populus trichocarpa HOM05D007517 ORTHO05D006922 2.5e-09 65.5 64 50.0
TPR.G6927 Trifolium pratense HOM05D005128 ORTHO05D006922 2.5e-09 65.5 49 63.3
Gorai.004G073800 Gossypium raimondii HOM05D007517 ORTHO05D006922 3.3e-09 65.1 63 50.8
TWI12G0979 Tripterygium wilfordii HOM05D007517 ORTHO05D006922 3.3e-09 65.1 87 42.5
Gohir.A08G060866 Gossypium hirsutum HOM05D007517 ORTHO05D006922 4.3e-09 64.7 76 46.1
QL10p016371 Quercus lobata HOM05D007517 ORTHO05D006922 4.3e-09 64.7 67 49.3
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 5.6e-09 64.3 76 48.7
QL10p016395 Quercus lobata HOM05D007517 ORTHO05D006922 5.6e-09 64.3 67 47.8
Rhsim05G0176100 Rhododendron simsii HOM05D007517 ORTHO05D006922 5.6e-09 64.3 86 36.0
QL10p016326 Quercus lobata HOM05D007517 ORTHO05D006922 7.3e-09 63.9 67 49.3
Potri.019G012400 Populus trichocarpa HOM05D007517 ORTHO05D006922 9.5e-09 63.5 65 50.8
ClCG07G000800 Citrullus lanatus HOM05D007517 ORTHO05D006922 1.2e-08 63.2 96 36.5
CsaV3_2G003890 Cucumis sativus L. HOM05D017963 ORTHO05D020474 1.2e-08 63.2 72 47.2
Rhsim05G0177900 Rhododendron simsii HOM05D007517 ORTHO05D006922 3.6e-08 61.6 85 36.5
CAN.G1256.1 Capsicum annuum HOM05D014319 ORTHO05D006922 4.7e-08 61.2 72 45.8
Atru.chr5.1625 Acer truncatum HOM05D007517 ORTHO05D006922 8.0e-08 60.5 95 37.9
Glyma.10G163800 Glycine max HOM05D007517 ORTHO05D006922 1.0e-07 60.1 82 46.3
Nitab4.5_0005247g0020 Nicotiana tabacum HOM05D014319 ORTHO05D006922 2.3e-07 58.9 63 42.9
Atru.chr2.873 Acer truncatum HOM05D007517 ORTHO05D006922 3.0e-07 58.5 91 39.6
Atru.chr2.879 Acer truncatum HOM05D007517 ORTHO05D006922 4.0e-07 58.2 62 43.5
ClCG02G016880 Citrullus lanatus HOM05D017963 ORTHO05D020474 4.0e-07 58.2 70 45.7
PGSC0003DMG400000987 Solanum tuberosum HOM05D014319 ORTHO05D006922 4.0e-07 58.2 73 43.8
COL.COLO4_15407 Corchorus olitorius HOM05D007517 ORTHO05D006922 5.2e-07 57.8 87 40.2
Sed0018312 Sechium edule HOM05D007517 ORTHO05D006922 5.2e-07 57.8 88 36.4
Duzib138G0038 Durio zibethinus HOM05D007517 ORTHO05D006922 6.8e-07 57.4 73 42.5
Gohir.D08G233850 Gossypium hirsutum HOM05D007517 ORTHO05D006922 6.8e-07 57.4 90 36.7
Gorai.004G248500 Gossypium raimondii HOM05D007517 ORTHO05D006922 6.8e-07 57.4 90 36.7
Potri.002G041950 Populus trichocarpa HOM05D007517 ORTHO05D006922 6.8e-07 57.4 77 39.0
Dinv30121 Davidia involucrata HOM05D007517 ORTHO05D006922 8.9e-07 57.0 47 59.6
Atru.chr2.874 Acer truncatum HOM05D007517 ORTHO05D006922 1.2e-06 56.6 60 43.3
COL.COLO4_05587 Corchorus olitorius HOM05D007517 ORTHO05D006922 1.2e-06 56.6 63 46.0
Gohir.A08G216801 Gossypium hirsutum HOM05D007517 ORTHO05D006922 1.2e-06 56.6 91 38.5
Gohir.A13G169025 Gossypium hirsutum HOM05D007517 ORTHO05D006922 1.2e-06 56.6 85 36.5
Potri.019G012702 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.5e-06 56.2 84 39.3
Potri.019G012900 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.5e-06 56.2 84 39.3
Cfa002378 Carpinus fangiana HOM05D007517 ORTHO05D006922 2.0e-06 55.8 64 42.2
Haze_24578 Corylus avellana HOM05D007517 ORTHO05D006922 2.0e-06 55.8 71 45.1
Potri.008G163000 Populus trichocarpa HOM05D007517 ORTHO05D006922 2.6e-06 55.5 82 39.0
Thecc.05G277600 Theobroma cacao HOM05D007517 ORTHO05D006922 2.6e-06 55.5 52 48.1
Potri.001G380300 Populus trichocarpa HOM05D007517 ORTHO05D006922 3.4e-06 55.1 80 37.5
Peaxi162Scf00519g00016 Petunia axillaris HOM05D014319 ORTHO05D006922 4.4e-06 54.7 63 41.3
DCAR_002343 Daucus carota HOM05D007517 ORTHO05D006922 9.8e-06 53.5 94 38.3
Sabra05G0170200 Salix brachista HOM05D007517 ORTHO05D006922 9.8e-06 53.5 76 39.5


User provided reference genes

Program Settings