Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G097300 Phaseolus vulgaris HOM05D008278 ORTHO05D009926 7.9e-21 103.2 67 100.0
COL.COLO4_13623 Corchorus olitorius HOM05D008278 ORTHO05D009926 6.7e-12 73.6 54 59.3
Manes.09G159200 Manihot esculenta HOM05D008278 ORTHO05D009926 6.7e-12 73.6 66 63.6
Dinv04275 Davidia involucrata HOM05D008278 ORTHO05D009926 5.6e-11 70.5 54 59.3
Thecc.05G292500 Theobroma cacao HOM05D008278 ORTHO05D009926 7.4e-11 70.1 52 59.6
CSS0040059 Camellia sinensis var. sinensis HOM05D008278 ORTHO05D009926 1.3e-10 69.3 68 70.6
GSVIVG01021911001 Vitis vinifera HOM05D008278 ORTHO05D009926 6.2e-10 67.0 29 89.7
MD04G1216200 Malus domestica HOM05D010912 ORTHO05D009926 1.1e-09 66.2 33 81.8
FAN14G0650 Fragaria x ananassa HOM05D010912 ORTHO05D009926 1.4e-09 65.9 29 89.7
Gohir.A11G257700 Gossypium hirsutum HOM05D010912 ORTHO05D009926 3.1e-09 64.7 52 59.6
Hma1.2p1_0209F.1_g089030 Hydrangea macrophylla HOM05D008278 ORTHO05D009926 3.1e-09 64.7 40 77.5
FAN05G5515 Fragaria x ananassa HOM05D010912 ORTHO05D009926 5.3e-09 63.9 28 89.3
Gohir.A11G257600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 5.3e-09 63.9 31 74.2
Gohir.D11G267600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 5.3e-09 63.9 31 74.2
Gorai.007G287300 Gossypium raimondii HOM05D010912 ORTHO05D009926 5.3e-09 63.9 31 74.2
FAN02G3698 Fragaria x ananassa HOM05D010912 ORTHO05D009926 6.9e-09 63.5 30 83.3
RcHm_v2.0_Chr3g0452671 Rosa chinensis HOM05D010912 ORTHO05D009926 1.5e-08 62.4 29 82.8
Actinidia24853 Actinidia chinensis HOM05D008278 ORTHO05D009926 2.6e-08 61.6 42 61.9
CiPaw.07G010500 Carya illinoinensis HOM05D010912 ORTHO05D009926 2.6e-08 61.6 30 80.0
FvH4_6g04120 Fragaria vesca HOM05D010912 ORTHO05D009926 2.6e-08 61.6 27 88.9
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 3.4e-08 61.2 47 70.2
Duzib151G0456 Durio zibethinus HOM05D008278 ORTHO05D009926 3.4e-08 61.2 42 64.3
Medtr7g108080 Medicago truncatula HOM05D008278 ORTHO05D009926 4.5e-08 60.8 38 71.1
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 5.8e-08 60.5 29 82.8
Potri.013G031800 Populus trichocarpa HOM05D010912 ORTHO05D009926 5.8e-08 60.5 62 74.2
TWI09G1464 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 5.8e-08 60.5 43 60.5
PGR119G0374 Punica granatum HOM05D008278 ORTHO05D009926 7.6e-08 60.1 32 71.9
Carub.0004s3061 Capsella rubella HOM05D008278 ORTHO05D009926 1.3e-07 59.3 35 74.3
Haze_04293 Corylus avellana HOM05D010912 ORTHO05D009926 1.3e-07 59.3 31 74.2
FAN05G5084 Fragaria x ananassa HOM05D010912 ORTHO05D009926 1.3e-07 59.3 26 88.5
Thhalv10001693m.g Eutrema salsugineum HOM05D008278 ORTHO05D009926 1.7e-07 58.9 34 76.5
MD04G1216300 Malus domestica HOM05D010912 ORTHO05D009926 1.7e-07 58.9 26 88.5
CiPaw.07G100700 Carya illinoinensis HOM05D008278 ORTHO05D009926 2.2e-07 58.5 42 59.5
Cc01_g20290 Coffea canephora HOM05D008278 ORTHO05D009926 2.2e-07 58.5 47 61.7
QL03p001140 Quercus lobata HOM05D010912 ORTHO05D009926 2.2e-07 58.5 29 79.3
Eucgr.H04419 Eucalyptus grandis HOM05D010912 ORTHO05D009926 2.9e-07 58.2 41 65.9
Thecc.04G277500 Theobroma cacao HOM05D008278 ORTHO05D009926 2.9e-07 58.2 36 66.7
Psat0s1883g0120 Pisum sativum HOM05D008278 ORTHO05D009926 3.8e-07 57.8 46 58.7
COL.COLO4_08021 Corchorus olitorius HOM05D008278 ORTHO05D009926 6.5e-07 57.0 50 58.0
Lj1g0017232 Lotus japonicus HOM05D008278 ORTHO05D009926 6.5e-07 57.0 44 56.8
Sc16g0008190 Simmondsia chinensis HOM05D010912 ORTHO05D009926 6.5e-07 57.0 25 84.0
Aqoxy5G00615 Aquilegia oxysepala HOM05D008278 ORTHO05D009926 8.4e-07 56.6 38 60.5
vmacro14967 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 8.4e-07 56.6 31 74.2
CiPaw.08G100100 Carya illinoinensis HOM05D008278 ORTHO05D009926 1.4e-06 55.8 73 64.4
PSO170G0879 Papaver somniferum HOM05D008278 ORTHO05D009926 1.4e-06 55.8 26 80.8
Thecc.01G291200 Theobroma cacao HOM05D008278 ORTHO05D009926 1.4e-06 55.8 43 58.1
Sc24g0003970 Simmondsia chinensis HOM05D008278 ORTHO05D009926 1.9e-06 55.5 48 60.4
Duzib138G1619 Durio zibethinus HOM05D008278 ORTHO05D009926 2.5e-06 55.1 61 57.4
CiPaw.02G086800 Carya illinoinensis HOM05D008278 ORTHO05D009926 4.2e-06 54.3 30 66.7
QL12p024203 Quercus lobata HOM05D008278 ORTHO05D009926 4.2e-06 54.3 33 69.7
Cc03_g02370 Coffea canephora HOM05D008278 ORTHO05D009926 5.5e-06 53.9 34 55.9
TWI14G0577 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 7.1e-06 53.5 26 76.9
Manes.01G214200 Manihot esculenta HOM05D008278 ORTHO05D009926 9.3e-06 53.1 43 60.5
PGR015G0009 Punica granatum HOM05D008278 ORTHO05D009926 9.3e-06 53.1 28 67.9


User provided reference genes

Program Settings