Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 5.4e-240 833.9 428 100.0
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 2.4e-216 755.4 452 86.9
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.4e-208 729.6 452 83.0
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 8.7e-206 720.3 452 82.7
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 2.3e-190 669.1 454 74.4
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 1.4e-187 659.8 455 76.3
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 4.0e-187 658.3 452 73.9
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 4.5e-186 654.8 477 70.9
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 1.1e-184 650.2 429 76.2
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 1.4e-184 649.8 454 73.8
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.9e-184 649.4 429 76.2
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 8.8e-174 614.0 407 76.4
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 7.9e-167 590.9 452 69.2
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 2.2e-164 582.8 447 67.3
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.0e-161 573.9 455 64.8
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 1.3e-161 573.5 454 65.2
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 8.5e-161 570.9 455 65.9
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 8.5e-161 570.9 459 67.1
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 9.4e-160 567.4 461 64.0
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 8.0e-159 564.3 452 65.0
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 2.6e-157 559.3 437 66.1
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 9.7e-157 557.4 457 65.0
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 1.7e-156 556.6 458 65.3
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 1.7e-156 556.6 459 64.7
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 2.8e-156 555.8 453 64.2
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 2.8e-156 555.8 451 65.2
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 6.3e-156 554.7 453 64.2
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 6.3e-156 554.7 455 63.7
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 6.3e-156 554.7 451 65.4
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 5.3e-155 551.6 457 65.9
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 2.6e-154 549.3 458 65.1
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 7.7e-154 547.7 452 64.4
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 7.7e-154 547.7 429 65.5
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 4.2e-152 542.0 452 63.9
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 1.6e-151 540.0 388 70.1
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 5.2e-150 535.0 455 62.4
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.2e-149 533.9 452 63.7
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 2.8e-148 529.3 437 62.7
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.8e-148 528.5 433 62.1
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 8.2e-148 527.7 455 61.5
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 1.1e-147 527.3 493 59.2
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 1.4e-147 526.9 343 75.8
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.4e-147 526.9 455 61.8
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 1.4e-147 526.9 452 61.1
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 5.3e-147 525.0 451 61.0
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 1.6e-146 523.5 450 61.6
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 2.0e-146 523.1 474 59.5
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.0e-146 523.1 462 62.8
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 7.7e-146 521.2 451 60.5
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 7.7e-146 521.2 459 59.9
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 3.8e-145 518.8 447 60.9
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 6.5e-145 518.1 454 59.7
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 1.5e-144 516.9 452 62.4
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 5.5e-144 515.0 456 60.5
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 7.2e-144 514.6 343 74.6
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 2.1e-143 513.1 454 59.0
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.8e-142 510.0 454 58.8
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 2.3e-142 509.6 454 58.4
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 2.3e-142 509.6 381 68.2
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.3e-142 509.6 381 68.2
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 4.0e-142 508.8 453 61.8
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 6.8e-142 508.1 456 59.9
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 6.8e-142 508.1 453 60.7
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 6.8e-142 508.1 450 59.6
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 3.4e-141 505.8 451 58.5
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 3.4e-141 505.8 449 59.0
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 2.2e-140 503.1 449 58.4
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.8e-140 502.7 454 57.7
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 3.7e-140 502.3 455 61.1
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 4.8e-140 501.9 452 60.0
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 8.3e-140 501.1 393 64.9
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.4e-139 500.4 476 58.8
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 7.0e-139 498.0 449 58.6
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 9.1e-139 497.7 456 57.7
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 1.6e-138 496.9 454 57.5
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 4.5e-138 495.4 343 71.1
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.7e-137 493.4 461 59.7
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 1.5e-136 490.3 480 55.4
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 2.1e-135 486.5 407 62.4
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 2.8e-135 486.1 471 55.8
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.8e-134 483.4 388 66.2
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 5.2e-134 481.9 471 55.6
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 6.8e-134 481.5 389 62.5
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 4.4e-133 478.8 440 59.1
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 9.8e-133 477.6 342 68.7
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.8e-131 473.4 340 70.6
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 1.5e-128 463.8 449 55.7
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 4.4e-125 452.2 455 55.8
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 5.8e-125 451.8 451 55.0
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 1.6e-122 443.7 468 53.2
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 2.7e-122 443.0 305 72.8
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 2.7e-122 443.0 375 64.5
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 6.6e-121 438.3 462 52.2
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 1.4e-118 430.6 257 79.4
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.7e-116 423.7 376 60.4
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.4e-115 420.6 380 60.0
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.4e-115 420.6 343 62.7
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 2.1e-111 406.8 381 55.4
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 8.1e-111 404.8 257 74.3
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-106 390.6 255 73.3
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 1.9e-104 383.6 366 56.3
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.4e-102 376.7 261 67.8
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 8.9e-102 374.8 459 48.4
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 7.8e-98 361.7 377 51.7
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 1.0e-97 361.3 294 60.5
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.5e-96 357.5 312 61.2
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 1.2e-93 347.8 346 52.9
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 1.1e-91 341.3 253 64.0
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 5.4e-91 339.0 302 59.9
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 9.3e-91 338.2 352 51.1
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 4.6e-90 335.9 356 49.4
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.1e-88 331.3 355 55.2
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 3.4e-85 319.7 382 47.4
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 6.9e-78 295.4 356 49.7
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.1e-67 261.5 435 41.1
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 2.5e-64 250.4 166 72.9
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.7e-64 249.2 391 40.2
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 2.9e-52 210.3 234 51.7
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 8.5e-52 208.8 288 42.0
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 5.9e-45 186.0 299 41.5
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 9.4e-35 152.1 93 71.0
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 1.4e-33 148.3 125 59.2
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 7.5e-32 142.5 133 57.9
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 2.2e-31 141.0 348 31.9
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 2.2e-31 141.0 193 46.1
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 2.4e-30 137.5 136 60.3
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.8e-25 121.3 122 50.8
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 7.5e-24 115.9 207 40.1
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 4.9e-23 113.2 218 33.0
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 9.1e-22 109.0 62 79.0
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 4.0e-17 93.6 83 59.0
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.5e-11 75.1 159 36.5
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 3.2e-06 57.4 122 40.2


User provided reference genes

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