Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.7e-193 679.1 330 100.0
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.2e-173 613.2 332 91.6
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 2.3e-166 589.0 331 87.6
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 5.2e-142 508.1 339 75.2
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 8.9e-142 507.3 334 75.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.7e-140 503.1 340 75.9
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.6e-135 486.5 336 73.5
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 2.8e-135 485.7 327 74.9
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 5.8e-133 478.0 327 73.1
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 6.4e-132 474.6 327 73.1
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.9e-131 473.0 327 72.8
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 3.3e-128 462.2 335 69.0
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 3.3e-128 462.2 331 68.6
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.8e-127 459.1 335 69.0
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 6.2e-127 458.0 347 66.9
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 5.2e-126 454.9 277 83.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 6.8e-126 454.5 333 67.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.7e-124 449.9 330 67.0
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 2.2e-124 449.5 330 66.1
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 6.4e-124 448.0 333 66.1
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 8.4e-124 447.6 311 69.5
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.1e-123 447.2 339 66.4
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.1e-123 447.2 340 65.0
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 5.4e-123 444.9 329 67.5
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 2.7e-122 442.6 334 66.8
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 2.7e-122 442.6 337 65.0
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 2.7e-122 442.6 329 67.2
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 4.6e-122 441.8 338 64.5
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.7e-121 439.9 301 71.4
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.7e-121 439.9 338 64.2
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 6.6e-121 438.0 318 67.3
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.3e-120 435.6 305 69.5
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 5.6e-120 434.9 333 65.2
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 9.6e-120 434.1 331 64.4
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 9.6e-120 434.1 338 64.2
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 4.8e-119 431.8 331 65.9
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 3.1e-118 429.1 336 62.8
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 5.3e-118 428.3 296 67.9
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 6.9e-118 427.9 359 63.8
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.9e-118 427.9 331 65.3
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 2.0e-117 426.4 340 63.5
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 7.6e-117 424.5 339 62.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 9.9e-117 424.1 330 63.6
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 9.9e-117 424.1 344 62.5
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.9e-116 422.5 339 61.9
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.1e-115 420.6 330 63.6
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.9e-115 419.9 339 61.1
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 5.4e-115 418.3 355 60.3
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 7.1e-115 417.9 336 63.4
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.2e-114 417.2 334 62.6
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.6e-114 416.8 297 65.7
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 2.1e-114 416.4 334 61.7
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 2.7e-114 416.0 303 67.0
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 3.5e-114 415.6 334 63.5
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.0e-113 414.1 333 62.2
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 3.0e-113 412.5 333 62.5
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 3.0e-113 412.5 357 60.5
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.1e-113 411.8 288 67.7
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.1e-112 410.6 314 63.4
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.9e-112 409.8 311 64.0
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 4.3e-112 408.7 330 60.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 9.6e-112 407.5 337 61.1
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.1e-111 406.4 304 66.4
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 2.8e-111 406.0 317 62.8
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 3.6e-111 405.6 325 62.8
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 4.8e-111 405.2 347 60.5
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 4.8e-111 405.2 317 62.5
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.1e-110 404.1 302 67.5
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.1e-110 404.1 314 62.1
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.1e-110 402.5 288 67.4
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 5.8e-109 398.3 307 66.8
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 7.6e-109 397.9 297 64.3
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 9.9e-109 397.5 336 61.0
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 2.2e-108 396.4 336 61.0
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 3.8e-108 395.6 335 59.1
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 4.9e-108 395.2 330 61.8
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.9e-107 393.3 338 59.8
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.4e-107 392.9 344 59.3
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 4.2e-107 392.1 331 60.4
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 5.4e-107 391.7 337 60.8
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 6.0e-106 388.3 313 61.0
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 2.3e-105 386.3 334 59.9
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.1e-105 385.2 299 63.9
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.1e-104 384.0 300 63.3
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.5e-104 383.6 338 60.1
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.5e-104 383.6 338 60.1
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 2.5e-104 382.9 283 65.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.4e-102 376.3 292 64.4
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 7.6e-101 371.3 313 60.1
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.0e-100 370.9 304 61.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.8e-97 360.1 301 56.8
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 2.3e-97 359.8 264 65.9
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 2.5e-96 356.3 215 75.3
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 8.2e-95 351.3 280 60.7
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 9.0e-94 347.8 265 60.0
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.2e-93 347.4 319 57.1
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 5.8e-93 345.1 248 66.1
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.2e-90 337.4 349 53.9
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 4.5e-85 318.9 328 51.5
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.2e-77 294.3 337 49.6
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.6e-77 293.1 238 63.4
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.9e-68 263.1 276 47.1
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.2e-66 257.7 327 43.1
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.4e-65 254.2 339 39.2
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.8e-65 253.8 277 45.5
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 3.5e-61 239.6 216 57.9
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 7.7e-61 238.4 213 56.3
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 1.1e-59 234.6 310 43.5
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 5.5e-59 232.3 220 57.3
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 5.2e-57 225.7 204 57.4
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.5e-56 224.2 248 42.7
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 2.2e-52 210.3 158 65.2
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 4.0e-49 199.5 333 37.8
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 4.0e-49 199.5 266 40.2
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.2e-32 144.8 175 49.7
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 3.2e-30 136.7 106 55.7
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.9e-28 129.8 141 54.6
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 2.0e-16 90.9 138 44.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.2e-14 83.6 159 37.1
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.9e-11 74.3 45 71.1
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.1e-09 68.6 101 40.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 6.4e-07 59.3 33 75.8
SMO172G0225 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 9.3e-06 55.5 66 43.9


User provided reference genes

Program Settings