Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 3.1e-215 751.5 374 100.0
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.0e-157 560.5 305 88.9
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 2.5e-156 555.8 308 87.7
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 3.7e-152 542.0 308 86.4
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.2e-137 493.8 291 81.1
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.0e-137 493.0 296 79.4
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 2.0e-137 493.0 298 81.2
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.0e-137 493.0 292 80.8
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 4.8e-136 488.4 294 81.0
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.6e-134 483.4 310 75.8
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 1.0e-133 480.7 292 79.1
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.6e-129 466.1 349 66.8
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 2.0e-118 429.9 328 63.4
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.7e-117 426.8 295 68.5
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.9e-117 425.6 298 66.4
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 5.0e-117 425.2 295 65.8
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.5e-116 422.9 297 66.3
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 3.6e-115 419.1 294 68.4
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 8.0e-115 417.9 297 67.3
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.4e-114 417.2 295 65.4
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.8e-114 416.8 293 65.9
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 2.3e-114 416.4 310 66.1
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 1.5e-113 413.7 296 66.9
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 1.5e-113 413.7 309 64.1
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 5.8e-113 411.8 288 66.7
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 7.5e-113 411.4 296 65.5
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 9.8e-113 411.0 352 58.8
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 2.2e-112 409.8 367 56.4
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 3.7e-112 409.1 309 63.8
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 4.9e-112 408.7 310 62.3
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 8.3e-112 407.9 295 65.4
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 5.4e-111 405.2 297 65.7
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 7.0e-111 404.8 296 65.2
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 9.2e-111 404.4 300 64.3
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.2e-110 404.1 308 62.0
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 2.3e-109 399.8 298 62.8
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 3.0e-109 399.4 305 63.3
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 5.1e-109 398.7 311 60.8
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 8.6e-109 397.9 287 65.2
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 8.6e-109 397.9 298 65.1
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.2e-107 394.0 296 60.8
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.2e-107 394.0 297 62.6
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.2e-107 394.0 300 64.0
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.6e-107 393.7 311 58.8
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.6e-107 393.7 298 63.4
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 2.8e-107 392.9 310 61.9
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 6.2e-107 391.7 295 62.7
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 8.1e-107 391.3 312 60.6
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.8e-106 390.2 296 62.5
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.8e-106 390.2 309 60.8
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.3e-106 389.8 302 61.9
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.3e-106 389.8 299 61.2
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 8.9e-106 387.9 312 61.2
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 2.0e-105 386.7 300 60.7
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 2.0e-105 386.7 310 61.6
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.0e-105 386.7 296 62.2
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.6e-105 386.3 297 63.6
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.7e-104 383.6 297 63.0
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 4.9e-104 382.1 369 53.9
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 4.9e-104 382.1 300 61.3
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 6.4e-104 381.7 302 61.3
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.1e-103 380.9 302 60.3
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.4e-103 380.6 284 62.7
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 1.6e-102 377.1 300 60.7
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 2.7e-102 376.3 296 59.5
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 3.5e-102 375.9 295 62.4
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.7e-101 373.6 273 65.6
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 3.0e-101 372.9 315 59.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 5.1e-101 372.1 315 59.7
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 6.6e-101 371.7 297 57.9
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 3.3e-100 369.4 318 60.1
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 3.3e-100 369.4 318 59.1
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 2.1e-99 366.7 318 58.8
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 2.1e-99 366.7 318 58.8
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 3.6e-99 365.9 293 59.0
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.4e-98 364.0 295 58.0
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.8e-98 363.6 351 52.1
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 7.6e-97 358.2 314 58.0
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.7e-96 357.1 311 56.3
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 6.4e-96 355.1 355 53.5
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 3.2e-95 352.8 312 57.7
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.6e-94 350.5 295 56.6
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 3.5e-94 349.4 283 58.7
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.7e-93 347.1 309 54.7
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.3e-85 320.1 235 66.8
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.6e-84 315.5 296 54.1
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 2.1e-83 313.5 254 57.5
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.3e-82 308.9 294 53.1
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 1.7e-64 250.8 217 59.0
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 2.8e-59 233.4 175 63.4
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 3.7e-59 233.0 179 62.0
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.8e-58 230.7 206 57.3
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 4.6e-54 216.1 300 38.7
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.4e-53 214.5 158 65.8
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.0e-49 200.7 190 51.1
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 1.8e-45 187.6 139 61.2
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 6.7e-45 185.7 293 35.8
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 9.7e-44 181.8 142 62.0
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.8e-43 180.3 144 56.2
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 6.7e-37 159.1 321 35.2
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 4.4e-36 156.4 147 55.1
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 2.2e-35 154.1 190 43.7
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 4.7e-22 109.8 88 61.4
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.8e-21 107.8 67 68.7
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 5.4e-18 96.3 317 27.1
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 5.5e-15 86.3 125 36.0
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.6e-14 84.7 318 26.7
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 2.8e-14 84.0 317 28.1
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.3e-13 80.9 247 29.6
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 2.0e-12 77.8 85 48.2
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.8e-11 73.9 110 34.5
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.2e-09 68.6 71 42.3
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 2.7e-09 67.4 68 47.1


User provided reference genes

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