Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 1.1e-133 479.9 228 100.0
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 2.4e-114 415.6 231 88.7
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 4.3e-111 404.8 231 84.8
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 1.4e-106 389.8 234 82.1
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 2.4e-98 362.5 234 79.1
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 3.3e-95 352.1 229 76.4
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 2.8e-94 349.0 231 76.2
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 3.1e-93 345.5 235 75.3
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 4.0e-93 345.1 229 76.9
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 1.1e-87 327.0 211 73.0
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 3.3e-87 325.5 233 68.2
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 3.3e-87 325.5 197 75.6
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 3.3e-87 325.5 236 69.1
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 4.3e-87 325.1 217 74.2
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 4.8e-86 321.6 176 87.5
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 6.2e-86 321.2 236 68.6
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 8.2e-86 320.9 218 72.0
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.8e-85 319.7 213 70.4
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 4.0e-85 318.5 223 70.9
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 5.3e-85 318.2 223 70.9
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 6.9e-85 317.8 221 69.7
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 3.4e-84 315.5 211 71.1
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 4.5e-84 315.1 192 79.7
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 5.8e-84 314.7 231 67.5
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.8e-84 314.7 211 71.1
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 7.6e-84 314.3 221 69.2
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.7e-83 313.2 193 78.2
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 2.9e-83 312.4 233 67.8
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 3.8e-83 312.0 184 79.9
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.5e-83 311.2 221 68.8
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 8.4e-83 310.8 232 65.9
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 1.9e-82 309.7 230 70.0
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.9e-82 309.7 225 68.0
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 3.2e-82 308.9 222 69.8
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 4.2e-82 308.5 188 79.3
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 9.3e-82 307.4 201 74.6
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 3.5e-81 305.4 165 86.7
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 7.9e-81 304.3 165 83.0
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 1.8e-80 303.1 221 67.9
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 2.3e-80 302.8 167 84.4
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 2.3e-80 302.8 167 84.4
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 3.0e-80 302.4 161 86.3
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 3.9e-80 302.0 171 83.6
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 6.7e-80 301.2 221 67.4
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 6.7e-80 301.2 165 82.4
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 6.7e-80 301.2 171 82.5
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 1.1e-79 300.4 223 66.8
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.1e-79 300.4 182 76.4
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 1.5e-79 300.1 203 71.4
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.5e-79 300.1 223 68.2
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 3.3e-79 298.9 179 78.2
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 4.3e-79 298.5 220 67.3
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 4.3e-79 298.5 168 82.1
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 9.7e-79 297.4 233 66.1
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 9.7e-79 297.4 215 67.9
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.3e-78 297.0 175 77.1
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.3e-78 297.0 172 79.7
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 1.6e-78 296.6 180 76.7
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.6e-78 296.6 223 66.8
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 2.8e-78 295.8 183 76.5
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 2.8e-78 295.8 169 82.2
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.7e-78 295.4 231 65.4
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 3.7e-78 295.4 188 75.0
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 4.8e-78 295.0 175 77.7
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 6.3e-78 294.7 167 82.0
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 6.3e-78 294.7 173 79.2
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 6.3e-78 294.7 171 79.5
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.4e-77 293.5 164 82.3
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 1.8e-77 293.1 165 81.8
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 4.1e-77 292.0 173 76.9
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.5e-76 290.0 171 77.8
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 2.6e-76 289.3 171 78.4
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 2.6e-76 289.3 171 77.8
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 5.9e-76 288.1 166 78.9
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.0e-75 287.3 164 79.9
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 2.2e-75 286.2 171 77.2
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 6.5e-75 284.6 166 78.9
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 8.5e-75 284.3 171 77.8
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 8.5e-75 284.3 171 77.8
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 8.5e-75 284.3 171 77.8
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 2.5e-74 282.7 171 77.8
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 2.5e-74 282.7 171 77.8
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 2.5e-74 282.7 171 77.8
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 5.5e-74 281.6 161 78.9
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 9.4e-74 280.8 159 83.6
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 3.9e-72 275.4 201 67.7
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 4.3e-71 271.9 160 77.5
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 9.7e-71 270.8 154 81.8
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 1.3e-70 270.4 149 85.2
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 6.9e-69 264.6 206 66.5
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 4.5e-68 261.9 147 83.0
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 7.7e-68 261.2 181 70.7
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.2e-67 259.6 168 67.3
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 9.4e-66 254.2 194 62.9
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 7.9e-65 251.1 161 74.5
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 8.5e-59 231.1 129 79.8
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.3e-56 223.0 211 55.5
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 6.7e-56 221.5 174 64.9
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 5.7e-55 218.4 155 61.9
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.4e-53 213.8 110 88.2
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 7.0e-53 211.5 166 62.7
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 2.0e-52 209.9 120 80.8
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 2.8e-46 189.5 230 50.0
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.8e-43 179.1 121 65.3
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 5.5e-42 175.3 130 61.5
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 4.7e-33 145.6 224 40.6
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 1.1e-29 134.4 80 75.0
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 7.0e-29 131.7 239 39.7
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.7e-14 84.0 41 87.8
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.7e-14 82.8 48 75.0


User provided reference genes

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