Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G074800 Phaseolus vulgaris HOM05D004073 ORTHO05D004785 3.3e-195 684.9 345 100.0
VMungo0540G1827 Vigna mungo HOM05D004073 ORTHO05D004785 2.2e-111 406.4 244 83.6
Lalb_Chr15g0083341 Lupinus albus HOM05D004073 ORTHO05D004785 1.3e-106 390.6 330 63.3
Lj6g0025058 Lotus japonicus HOM05D004073 ORTHO05D004785 1.7e-106 390.2 317 67.2
Medtr4g055190 Medicago truncatula HOM05D004073 ORTHO05D004785 3.1e-105 386.0 325 63.4
Lj2g0012663 Lotus japonicus HOM05D004073 ORTHO05D004785 7.0e-105 384.8 317 66.6
Psat7g190200 Pisum sativum HOM05D004073 ORTHO05D004785 7.7e-104 381.3 325 59.4
Ca_19377_v3 Cicer arietinum L. HOM05D004073 ORTHO05D004785 1.3e-103 380.6 323 63.5
arahy.Tifrunner.gnm1.ann1.F1PCFU Arachis hypogaea HOM05D004073 ORTHO05D004785 3.8e-103 379.0 337 61.4
arahy.Tifrunner.gnm1.ann1.HAYR03 Arachis hypogaea HOM05D004073 ORTHO05D004785 6.7e-100 368.2 324 61.7
QL08p004797 Quercus lobata HOM05D004073 ORTHO05D004785 2.8e-90 336.3 327 54.7
Lj3g0026799 Lotus japonicus HOM05D004073 ORTHO05D004785 4.8e-90 335.5 324 55.2
Cfa002798 Carpinus fangiana HOM05D004073 ORTHO05D004785 1.4e-89 334.0 326 55.2
CiPaw.01G209600 Carya illinoinensis HOM05D004073 ORTHO05D004785 1.7e-87 327.0 325 56.3
Manes.03G140000 Manihot esculenta HOM05D004073 ORTHO05D004785 1.7e-87 327.0 328 53.4
Prupe.4G240000 Prunus persica HOM05D004073 ORTHO05D004785 2.9e-87 326.2 324 53.1
Nitab4.5_0000276g0150 Nicotiana tabacum HOM05D004073 ORTHO05D004785 4.2e-86 322.4 326 53.4
arahy.Tifrunner.gnm1.ann1.9SIV6F Arachis hypogaea HOM05D004073 ORTHO05D004785 2.8e-85 319.7 325 57.2
Haze_25099 Corylus avellana HOM05D004073 ORTHO05D004785 3.6e-85 319.3 329 52.3
Hma1.2p1_0036F.1_g022540 Hydrangea macrophylla HOM05D004073 ORTHO05D004785 4.7e-85 318.9 328 54.6
Nitab4.5_0000083g0020 Nicotiana tabacum HOM05D004073 ORTHO05D004785 1.0e-84 317.8 326 51.8
CiPaw.02G129700 Carya illinoinensis HOM05D004073 ORTHO05D004785 1.4e-84 317.4 326 52.8
Solyc04g056610.3 Solanum lycopersicum HOM05D004073 ORTHO05D004785 4.0e-84 315.8 326 53.1
Ciclev10008892m.g Citrus clementina HOM05D004073 ORTHO05D004785 6.8e-84 315.1 327 51.7
Peaxi162Scf00529g00814 Petunia axillaris HOM05D004073 ORTHO05D004785 8.8e-84 314.7 325 52.3
Glyma.16G148100 Glycine max HOM05D004073 ORTHO05D004785 2.6e-83 313.2 327 51.4
MD11G1201600 Malus domestica HOM05D004073 ORTHO05D004785 2.6e-83 313.2 329 52.0
PGSC0003DMG400010530 Solanum tuberosum HOM05D004073 ORTHO05D004785 2.6e-83 313.2 326 52.8
arahy.Tifrunner.gnm1.ann1.AHDC81 Arachis hypogaea HOM05D004073 ORTHO05D004785 4.4e-83 312.4 332 53.9
Dinv10322 Davidia involucrata HOM05D004073 ORTHO05D004785 4.4e-83 312.4 329 54.1
Lalb_Chr01g0018421 Lupinus albus HOM05D004073 ORTHO05D004785 5.7e-83 312.0 333 52.3
Sopen04g025530 Solanum pennellii HOM05D004073 ORTHO05D004785 9.8e-83 311.2 326 52.1
Sc03g0011140 Simmondsia chinensis HOM05D004073 ORTHO05D004785 1.3e-82 310.8 329 50.5
Medtr4g086170 Medicago truncatula HOM05D004073 ORTHO05D004785 2.2e-82 310.1 330 51.5
Potri.001G366000 Populus trichocarpa HOM05D004073 ORTHO05D004785 2.2e-82 310.1 326 53.1
ClCG09G021180 Citrullus lanatus HOM05D004073 ORTHO05D004785 2.8e-82 309.7 324 51.9
MD00G1099100 Malus domestica HOM05D004073 ORTHO05D004785 3.7e-82 309.3 329 52.0
Ca_04178_v3 Cicer arietinum L. HOM05D004073 ORTHO05D004785 4.9e-82 308.9 324 52.8
Phvul.004G069300 Phaseolus vulgaris HOM05D004073 ORTHO05D004785 6.3e-82 308.5 330 50.9
GSVIVG01014646001 Vitis vinifera HOM05D004073 ORTHO05D004785 6.3e-82 308.5 329 52.9
TWI39G0963 Tripterygium wilfordii HOM05D004073 ORTHO05D004785 8.3e-82 308.1 325 52.9
MELO3C024919.2 Cucumis melo HOM05D004073 ORTHO05D004785 1.1e-81 307.8 324 51.2
Duzib213G1048 Durio zibethinus HOM05D004073 ORTHO05D004785 3.1e-81 306.2 328 52.7
Cc02_g24500 Coffea canephora HOM05D004073 ORTHO05D004785 4.1e-81 305.8 329 51.4
RcHm_v2.0_Chr5g0053951 Rosa chinensis HOM05D004073 ORTHO05D004785 5.4e-81 305.4 328 50.0
MSTRG.20573 Avicennia marina HOM05D004073 ORTHO05D004785 7.0e-81 305.1 321 51.7
Sabra16G0239500 Salix brachista HOM05D004073 ORTHO05D004785 9.2e-81 304.7 325 51.7
PGSC0003DMG400003290 Solanum tuberosum HOM05D004073 ORTHO05D004785 1.6e-80 303.9 326 50.6
Glyma.02G067000 Glycine max HOM05D004073 ORTHO05D004785 2.0e-80 303.5 329 51.1
VMungo0464G1872 Vigna mungo HOM05D004073 ORTHO05D004785 3.5e-80 302.8 329 51.1
Thecc.07G016400 Theobroma cacao HOM05D004073 ORTHO05D004785 4.5e-80 302.4 327 52.0
Gohir.A01G090300 Gossypium hirsutum HOM05D004073 ORTHO05D004785 1.3e-79 300.8 328 52.1
CAN.G217.4 Capsicum annuum HOM05D004073 ORTHO05D004785 3.8e-79 299.3 329 52.0
Gorai.002G098800 Gossypium raimondii HOM05D004073 ORTHO05D004785 3.8e-79 299.3 327 51.4
Manes.15G061500 Manihot esculenta HOM05D004073 ORTHO05D004785 3.8e-79 299.3 324 49.7
CSS0000121 Camellia sinensis var. sinensis HOM05D004073 ORTHO05D004785 1.1e-78 297.7 327 51.1
Duzib170G0711 Durio zibethinus HOM05D004073 ORTHO05D004785 1.1e-78 297.7 328 50.0
Sed0023598 Sechium edule HOM05D004073 ORTHO05D004785 2.5e-78 296.6 327 49.8
TAR629G1249 Trochodendron aralioides HOM05D004073 ORTHO05D004785 3.3e-78 296.2 330 51.5
Gohir.D01G075600 Gossypium hirsutum HOM05D004073 ORTHO05D004785 2.1e-77 293.5 327 50.5
Sed0026445 Sechium edule HOM05D004073 ORTHO05D004785 2.8e-77 293.1 323 48.9
CSS0032183 Camellia sinensis var. sinensis HOM05D004073 ORTHO05D004785 2.3e-76 290.0 331 50.8
MBI16_g14388_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 3.0e-76 289.7 331 52.6
RcHm_v2.0_Chr5g0077271 Rosa chinensis HOM05D004073 ORTHO05D004785 4.0e-76 289.3 326 48.2
Hund23121 Selenicereus undatus HOM05D004073 ORTHO05D004785 6.8e-76 288.5 336 48.8
CSS0006286 Camellia sinensis var. sinensis HOM05D004073 ORTHO05D004785 8.9e-76 288.1 275 54.5
Rhsim04G0013700 Rhododendron simsii HOM05D004073 ORTHO05D004785 8.9e-76 288.1 330 48.8
Medtr6g005540 Medicago truncatula HOM05D004073 ORTHO05D004785 3.4e-75 286.2 350 47.7
CDE06G2507 Ceratophyllum demersum HOM05D004073 ORTHO05D004785 7.5e-75 285.0 325 48.6
TAR629G1509 Trochodendron aralioides HOM05D004073 ORTHO05D004785 7.5e-75 285.0 332 51.2
Gohir.A13G133800 Gossypium hirsutum HOM05D004073 ORTHO05D004785 9.8e-75 284.6 336 48.8
Eucgr.F02061 Eucalyptus grandis HOM05D004073 ORTHO05D004785 1.3e-74 284.3 323 50.5
Hund01907 Selenicereus undatus HOM05D004073 ORTHO05D004785 1.3e-74 284.3 337 48.7
Migut.B01283 Erythranthe guttata HOM05D004073 ORTHO05D004785 1.7e-74 283.9 324 47.2
Lj1A888G37 Lonicera japonica HOM05D004073 ORTHO05D004785 1.7e-74 283.9 268 55.6
Lj8A177T32 Lonicera japonica HOM05D004073 ORTHO05D004785 4.9e-74 282.3 273 55.7
PGR083G0661 Punica granatum HOM05D004073 ORTHO05D004785 1.8e-73 280.4 330 48.5
HanXRQChr05g0159911 Helianthus annuus HOM05D004073 ORTHO05D004785 3.2e-73 279.6 334 48.8
FAN21G2863 Fragaria x ananassa HOM05D004073 ORTHO05D004785 4.1e-73 279.3 319 47.6
Gorai.013G153800 Gossypium raimondii HOM05D004073 ORTHO05D004785 4.1e-73 279.3 336 48.5
TPR.G8724 Trifolium pratense HOM05D004073 ORTHO05D004785 4.1e-73 279.3 320 50.0
CANSAT01G2739 Cannabis sativa HOM05D004073 ORTHO05D004785 5.4e-73 278.9 323 47.7
FvH4_3g29460 Fragaria vesca HOM05D004073 ORTHO05D004785 1.6e-72 277.3 319 47.6
Psat1g055880 Pisum sativum HOM05D004073 ORTHO05D004785 1.6e-72 277.3 329 48.6
FAN25G0469 Fragaria x ananassa HOM05D004073 ORTHO05D004785 3.5e-72 276.2 315 47.9
unitig_26.g10112 Utricularia gibba HOM05D004073 ORTHO05D004785 3.5e-72 276.2 353 44.5
SalBow3G0415 Salvia bowleyana HOM05D004073 ORTHO05D004785 5.9e-72 275.4 332 47.6
Oeu005967.2 Olea europaea HOM05D004073 ORTHO05D004785 1.0e-71 274.6 385 43.1
PSO302G0019 Papaver somniferum HOM05D004073 ORTHO05D004785 3.0e-71 273.1 333 48.6
FAN11G2481 Fragaria x ananassa HOM05D004073 ORTHO05D004785 3.9e-71 272.7 318 47.2
Gohir.D13G137200 Gossypium hirsutum HOM05D004073 ORTHO05D004785 1.5e-70 270.8 330 48.2
AT5G55610 Arabidopsis thaliana HOM05D004073 ORTHO05D004785 1.9e-70 270.4 327 47.1
Lsat_1_v5_gn_5_1501 Lactuca sativa HOM05D004073 ORTHO05D004785 3.3e-70 269.6 324 48.5
SalBow6G4871 Salvia bowleyana HOM05D004073 ORTHO05D004785 4.3e-70 269.2 321 47.0
PSO210G1542 Papaver somniferum HOM05D004073 ORTHO05D004785 1.2e-69 267.7 335 47.8
THA.LOC104817703 Tarenaya hassleriana HOM05D004073 ORTHO05D004785 1.2e-69 267.7 330 46.7
HanXRQChr07g0195741 Helianthus annuus HOM05D004073 ORTHO05D004785 2.8e-69 266.5 333 47.4
vmacro09656 Vaccinium macrocarpon HOM05D004073 ORTHO05D004785 3.6e-69 266.2 364 44.8
EL10Ac4g07603 Beta vulgaris HOM05D004073 ORTHO05D004785 6.2e-69 265.4 338 46.2
CARHR268920 Cardamine hirsuta HOM05D004073 ORTHO05D004785 3.1e-68 263.1 329 47.1
COL.COLO4_09810 Corchorus olitorius HOM05D004073 ORTHO05D004785 8.9e-68 261.5 270 51.5
BcaC04g20215 Brassica carinata HOM05D004073 ORTHO05D004785 7.5e-67 258.5 330 46.4
C09p46590 Brassica napus HOM05D004073 ORTHO05D004785 7.5e-67 258.5 330 46.4
BolC9t57510H Brassica oleracea HOM05D004073 ORTHO05D004785 7.5e-67 258.5 330 46.4
SGA_v2.0_scaffold119G32745 Striga asiatica HOM05D004073 ORTHO05D004785 1.4e-65 254.2 353 44.8
AUR62017071 Chenopodium quinoa HOM05D004073 ORTHO05D004785 3.2e-65 253.1 339 44.5
CDE04G2763 Ceratophyllum demersum HOM05D004073 ORTHO05D004785 7.0e-65 251.9 304 48.0
Ah.06g181300 Amaranthus hybridus HOM05D004073 ORTHO05D004785 1.2e-64 251.1 326 45.1
AUR62036423 Chenopodium quinoa HOM05D004073 ORTHO05D004785 1.6e-64 250.8 339 44.0
Carub.0008s1598 Capsella rubella HOM05D004073 ORTHO05D004785 2.7e-64 250.0 326 45.4
AUR62036429 Chenopodium quinoa HOM05D004073 ORTHO05D004785 3.5e-64 249.6 339 43.7
A10p12860 Brassica napus HOM05D004073 ORTHO05D004785 4.6e-64 249.2 334 45.2
BraA10t43379Z Brassica rapa HOM05D004073 ORTHO05D004785 4.6e-64 249.2 334 45.2
Aa31LG3G11560 Aethionema arabicum HOM05D004073 ORTHO05D004785 1.7e-63 247.3 374 41.4
DCAR_013227 Daucus carota HOM05D002706 ORTHO05D003253 2.3e-63 246.9 323 47.7
Sp6g17530 Schrenkiella parvula HOM05D004073 ORTHO05D004785 8.6e-63 245.0 329 44.7
BcaB08g35921 Brassica carinata HOM05D004073 ORTHO05D004785 2.5e-62 243.4 328 43.9
ATR1126G058 Amborella trichopoda HOM05D004073 ORTHO05D004785 7.3e-62 241.9 330 44.8
Thhalv10014039m.g Eutrema salsugineum HOM05D004073 ORTHO05D004785 1.2e-61 241.1 336 44.0
AL8G31180 Arabidopsis lyrata HOM05D004073 ORTHO05D004785 2.8e-61 240.0 326 44.2
CsaV3_7G018320 Cucumis sativus L. HOM05D004073 ORTHO05D004785 5.2e-60 235.7 211 56.9
Aqoxy5G03484 Aquilegia oxysepala HOM05D004073 ORTHO05D004785 1.2e-59 234.6 321 45.5
Dinv40845 Davidia involucrata HOM05D004073 ORTHO05D004785 3.4e-59 233.0 246 53.3
A02p09590 Brassica napus HOM05D004073 ORTHO05D004785 4.4e-59 232.6 337 43.9
BraA02t06023Z Brassica rapa HOM05D004073 ORTHO05D004785 5.8e-59 232.3 337 43.9
C02p15980 Brassica napus HOM05D004073 ORTHO05D004785 9.9e-59 231.5 337 43.6
Nn1g07482 Nelumbo nucifera HOM05D004073 ORTHO05D004785 1.6e-56 224.2 249 50.2
Cpa.g.sc12.171 Carica papaya HOM05D004073 ORTHO05D004785 1.9e-54 217.2 336 40.8
ECA240G0169 Erigeron canadensis HOM05D004073 ORTHO05D004785 9.5e-54 214.9 308 44.2
BolC2t07705H Brassica oleracea HOM05D004073 ORTHO05D004785 1.2e-53 214.5 366 39.6
Os12g0498800 Oryza sativa ssp. japonica HOM05D004073 ORTHO05D004785 5.2e-52 209.1 327 41.0
ECA246G0082 Erigeron canadensis HOM05D004073 ORTHO05D004785 4.9e-50 202.6 316 40.8
HPP92_020483 Vanilla planifolia HOM05D004073 ORTHO05D004785 4.9e-50 202.6 315 40.6
BcaB05g22217 Brassica carinata HOM05D004073 ORTHO05D004785 8.4e-50 201.8 338 40.5
Actinidia35391 Actinidia chinensis HOM05D004073 ORTHO05D004785 1.4e-49 201.1 173 57.8
Haze_03265 Corylus avellana HOM05D004073 ORTHO05D004785 1.4e-49 201.1 234 49.6
CANSAT01G1348 Cannabis sativa HOM05D004073 ORTHO05D004785 2.3e-47 193.7 301 41.9
arahy.Tifrunner.gnm1.ann1.0WG7ZM Arachis hypogaea HOM05D004073 ORTHO05D004785 5.6e-46 189.1 174 57.5
MD00G1008300 Malus domestica HOM05D004073 ORTHO05D004785 3.6e-45 186.4 241 43.6
arahy.Tifrunner.gnm1.ann1.W5ZFFA Arachis hypogaea HOM05D004073 ORTHO05D004785 4.7e-45 186.0 153 63.4
TPR.G15593 Trifolium pratense HOM05D004073 ORTHO05D004785 9.0e-44 181.8 324 38.6
Atru.chr2.3668 Acer truncatum HOM05D004073 ORTHO05D004785 4.4e-43 179.5 162 58.0
Mapoly0030s0146 Marchantia polymorpha HOM05D004073 ORTHO05D004785 2.7e-40 170.2 228 42.5
Pp3c17_1290 Physcomitrium patens HOM05D004073 ORTHO05D004785 6.0e-40 169.1 305 39.0
Pp3c12_2880 Physcomitrium patens HOM05D004073 ORTHO05D004785 7.8e-40 168.7 297 39.4
TPR.G31066 Trifolium pratense HOM05D004073 ORTHO05D004785 8.1e-37 158.7 142 59.2
AagrBONN_evm.TU.Sc2ySwM_117.3546 Anthoceros agrestis HOM05D004073 ORTHO05D004785 2.4e-36 157.1 238 43.3
Nn1g03214 Nelumbo nucifera HOM05D004073 ORTHO05D004785 1.5e-35 154.5 212 44.3
Gorai.013G151000 Gossypium raimondii HOM05D004073 ORTHO05D004785 2.9e-34 150.2 202 45.0
SMO172G0209 Selaginella moellendorffii HOM05D004073 ORTHO05D004785 6.4e-34 149.1 328 34.1
MBI16_g14390_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 1.1e-33 148.3 140 53.6
Gohir.D06G153600 Gossypium hirsutum HOM05D004073 ORTHO05D004785 9.3e-33 145.2 202 44.6
Gorai.002G215300 Gossypium raimondii HOM05D004073 ORTHO05D004785 1.2e-32 144.8 202 44.6
MBI16_g43434_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 1.8e-31 141.0 116 60.3
Medtr4g055205 Medicago truncatula HOM05D004073 ORTHO05D004785 2.5e-30 137.1 101 65.3
Gorai.010G179600 Gossypium raimondii HOM05D004073 ORTHO05D004785 3.7e-29 133.3 176 44.9
SEGI_11688 Sequoiadendron giganteum HOM05D004073 ORTHO05D004785 4.5e-27 126.3 118 50.8
SEGI_22606 Sequoiadendron giganteum HOM05D004073 ORTHO05D004785 1.0e-23 115.2 204 37.3
TAR626G1493 Trochodendron aralioides HOM05D004073 ORTHO05D004785 1.2e-19 101.7 147 42.9
Zm00001eb409570 Zea mays HOM05D004073 ORTHO05D004785 1.2e-19 101.7 211 38.9
Gohir.A04G002800 Gossypium hirsutum HOM05D004073 ORTHO05D004785 3.4e-19 100.1 131 41.2
Actinidia37162 Actinidia chinensis HOM05D004073 ORTHO05D004785 1.7e-18 97.8 153 41.2
Thecc.07G016200 Theobroma cacao HOM05D004073 ORTHO05D004785 3.0e-15 87.0 98 50.0
PGSC0003DMG401021129 Solanum tuberosum HOM05D004073 ORTHO05D004785 1.3e-13 81.6 52 73.1
CBR_g33924 Chara braunii HOM05D004073 ORTHO05D004785 6.3e-13 79.3 221 29.9
HPP92_020450 Vanilla planifolia HOM05D004073 ORTHO05D004785 4.1e-12 76.6 88 47.7
PRCOL_00005800 Prasinoderma coloniale HOM05D004073 ORTHO05D004785 2.6e-11 73.9 233 27.5
MBI19_g20151_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 4.6e-08 63.2 135 31.1
GSVIVG01014652001 Vitis vinifera HOM05D004073 ORTHO05D004785 2.5e-06 57.4 55 47.3
VMungo1127G1263 Vigna mungo HOM05D004073 ORTHO05D004785 5.7e-06 56.2 39 64.1
Lsat_1_v5_gn_1_76240 Lactuca sativa HOM05D004073 ORTHO05D004785 9.7e-06 55.5 80 46.2


User provided reference genes

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