Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 6.8e-298 1026.5 511 100.0
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.7e-269 932.2 512 90.4
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 3.9e-269 931.0 487 95.3
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 8.1e-267 923.3 513 89.9
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.2e-246 856.3 508 85.4
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.5e-246 854.7 515 82.9
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 8.7e-245 850.1 508 84.6
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.3e-243 846.3 515 82.5
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 9.9e-241 836.6 514 81.1
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 2.2e-240 835.5 513 81.9
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.9e-239 832.4 514 81.7
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 1.9e-215 752.7 476 78.2
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 2.7e-214 748.8 488 78.7
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 1.0e-213 746.9 458 79.0
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.1e-210 736.9 511 70.6
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 3.1e-210 735.3 458 78.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.0e-210 733.8 476 76.5
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.6e-209 732.3 476 76.3
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.4e-209 731.9 476 76.1
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 5.9e-209 731.1 497 73.2
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 5.9e-209 731.1 476 76.1
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 5.9e-209 731.1 476 76.5
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 2.2e-208 729.2 470 76.8
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 3.8e-208 728.4 500 73.4
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 5.0e-208 728.0 512 71.9
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 5.5e-207 724.5 516 71.5
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.7e-206 722.2 511 70.1
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 6.1e-206 721.1 513 70.6
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.0e-205 720.3 511 69.9
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.4e-205 719.9 467 75.6
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.4e-205 719.9 511 69.9
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 3.0e-205 718.8 500 71.2
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 3.0e-205 718.8 512 69.3
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 3.9e-205 718.4 512 70.1
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 8.8e-205 717.2 515 69.5
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.1e-204 716.8 508 71.9
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.1e-204 716.8 494 73.1
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 5.7e-204 714.5 516 69.6
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 7.4e-204 714.1 544 69.7
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 9.7e-204 713.8 521 71.2
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 1.3e-203 713.4 511 69.7
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 2.8e-203 712.2 495 71.9
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 8.2e-203 710.7 517 70.8
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.8e-202 709.5 512 69.7
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.2e-200 702.6 512 68.9
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.8e-200 701.8 511 67.9
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 8.5e-200 700.7 519 69.7
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.1e-199 700.3 512 68.9
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 5.5e-199 698.0 519 67.8
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 9.4e-199 697.2 512 68.2
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 9.7e-196 687.2 465 73.1
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.4e-194 683.3 459 72.8
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.4e-194 683.3 512 67.0
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 3.1e-194 682.2 459 72.8
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 7.0e-194 681.0 512 68.4
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 9.1e-194 680.6 441 75.3
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 5.9e-193 677.9 459 72.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 6.5e-192 674.5 517 67.1
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.6e-190 669.8 475 69.1
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.1e-190 669.5 450 74.0
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.7e-187 659.8 448 72.1
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 8.2e-187 657.5 512 65.0
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 3.1e-186 655.6 413 78.5
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 3.2e-183 645.6 453 69.1
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.6e-182 642.1 458 69.4
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 3.0e-181 639.0 513 63.2
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.2e-180 637.1 463 68.0
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 7.5e-180 634.4 446 68.8
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 8.3e-179 630.9 514 63.2
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.9e-177 624.8 446 68.4
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 7.7e-177 624.4 417 71.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.7e-176 623.2 446 68.2
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.2e-176 622.9 446 67.3
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 8.5e-176 620.9 517 61.5
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.1e-175 620.5 446 67.5
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 7.2e-175 617.8 518 62.2
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 4.7e-174 615.1 525 59.4
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 1.0e-173 614.0 441 68.0
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 6.8e-173 611.3 516 61.4
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.5e-172 610.1 520 60.4
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 2.6e-172 609.4 453 66.2
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 7.5e-172 607.8 521 59.1
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 1.3e-171 607.1 442 67.4
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 2.8e-171 605.9 520 58.8
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.9e-171 605.1 512 60.5
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 4.9e-171 605.1 449 65.5
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 2.4e-170 602.8 521 58.5
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 2.7e-169 599.4 457 63.7
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 5.9e-169 598.2 452 63.9
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 2.3e-168 596.3 457 65.6
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 8.0e-166 587.8 445 63.6
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 7.5e-164 581.3 512 58.0
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 6.2e-158 561.6 380 73.7
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.5e-156 557.0 397 69.0
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 1.6e-153 547.0 353 73.7
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.1e-141 507.7 462 55.0
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 3.1e-141 506.1 424 59.0
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 5.2e-141 505.4 458 55.2
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.7e-129 466.5 459 55.6
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 7.3e-127 458.4 290 76.6
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.3e-112 411.0 423 47.0
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.5e-111 407.5 373 55.5
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 5.8e-108 395.6 256 73.8
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.3e-94 351.3 422 47.9
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 2.6e-87 327.0 437 39.6
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 6.5e-83 312.4 221 69.2
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.7e-78 297.7 236 66.9
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 9.1e-69 265.4 150 83.3
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.7e-68 263.8 428 35.3
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.3e-62 245.0 432 32.9
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 2.7e-60 237.3 134 82.8
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.9e-50 204.5 171 60.8
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 4.9e-38 163.3 107 73.8
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 2.4e-37 161.0 228 44.3
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.6e-36 158.3 228 44.3
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 1.3e-35 155.2 199 41.7
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 5.0e-35 153.3 125 60.8
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.5e-34 151.0 135 58.5
VMungo1383G3392 Vigna mungo HOM05D000402 ORTHO05D000263 8.1e-17 92.8 57 78.9
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 4.0e-16 90.5 143 37.8


User provided reference genes

Program Settings