Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 8.0e-68 260.4 139 100.0
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 4.9e-57 224.6 139 87.1
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 7.7e-55 217.2 124 92.7
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 5.0e-54 214.5 124 91.1
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 3.6e-52 208.4 124 88.7
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 5.7e-50 201.1 139 76.3
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 7.3e-45 184.1 137 69.3
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 7.3e-45 184.1 137 70.8
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 2.1e-44 182.6 138 70.3
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 4.7e-44 181.4 136 72.1
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 1.5e-42 176.4 138 69.6
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 4.4e-42 174.9 138 66.7
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 5.8e-42 174.5 135 67.4
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 4.9e-41 171.4 137 62.8
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 1.4e-40 169.9 135 64.4
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 2.4e-40 169.1 137 62.0
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 4.1e-40 168.3 137 61.3
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 5.4e-40 167.9 137 62.8
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 5.4e-40 167.9 135 63.7
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 7.0e-40 167.5 134 64.9
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 9.2e-40 167.2 138 65.2
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 1.6e-39 166.4 134 64.9
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 2.7e-39 165.6 135 64.4
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 3.5e-39 165.2 134 61.2
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 4.6e-39 164.9 176 55.1
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 4.6e-39 164.9 137 61.3
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 6.0e-39 164.5 137 62.0
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 5.0e-38 161.4 137 60.6
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 5.0e-38 161.4 135 61.5
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 8.6e-38 160.6 134 62.7
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.5e-37 159.1 137 61.3
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 9.5e-37 157.1 137 59.1
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 1.6e-36 156.4 140 62.1
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 1.6e-36 156.4 137 60.6
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 4.7e-36 154.8 137 56.9
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 4.7e-36 154.8 136 62.5
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 6.2e-36 154.5 140 59.3
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 8.1e-36 154.1 143 53.1
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 8.1e-36 154.1 137 56.9
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.1e-35 153.7 140 60.0
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 1.1e-35 153.7 140 60.0
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 6.8e-35 151.0 140 58.6
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 6.8e-35 151.0 124 62.1
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 8.9e-35 150.6 143 52.4
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 8.9e-35 150.6 140 58.6
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 3.4e-34 148.7 136 55.1
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 2.9e-33 145.6 139 53.2
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 3.7e-33 145.2 140 57.9
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 3.7e-33 145.2 122 63.9
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 4.9e-33 144.8 130 60.0
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 8.3e-33 144.1 122 59.8
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 5.4e-32 141.4 124 60.5
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 7.1e-32 141.0 124 55.6
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 1.6e-31 139.8 140 56.4
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 1.6e-31 139.8 137 57.7
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 7.8e-31 137.5 140 55.0
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 1.0e-30 137.1 116 65.5
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 3.9e-30 135.2 140 54.3
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 5.1e-30 134.8 137 53.3
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 8.6e-30 134.0 136 52.9
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 3.3e-29 132.1 137 49.6
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 4.3e-29 131.7 139 46.8
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.6e-28 129.8 137 54.7
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 2.1e-28 129.4 137 52.6
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 2.8e-28 129.0 141 51.8
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 3.6e-28 128.6 144 52.8
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 8.1e-28 127.5 137 49.6
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 8.1e-28 127.5 141 51.1
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 1.4e-27 126.7 137 52.6
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.4e-27 126.7 171 44.4
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 1.4e-27 126.7 135 48.9
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 2.3e-27 125.9 139 49.6
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 2.3e-27 125.9 137 48.9
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 3.1e-27 125.6 137 52.6
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 6.8e-27 124.4 117 60.7
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 8.9e-27 124.0 105 64.8
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.5e-26 123.2 136 49.3
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.0e-26 122.9 137 51.8
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 2.6e-26 122.5 127 55.1
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 2.6e-26 122.5 139 45.3
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 3.4e-26 122.1 139 47.5
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 5.8e-26 121.3 139 46.0
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 5.8e-26 121.3 124 56.5
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 1.3e-25 120.2 139 47.5
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 1.3e-25 120.2 139 47.5
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.7e-25 119.8 126 54.8
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.2e-25 119.4 100 64.0
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 2.9e-25 119.0 102 59.8
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 6.4e-25 117.9 139 46.8
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 6.4e-25 117.9 102 60.8
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 8.4e-25 117.5 139 45.3
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 1.1e-24 117.1 124 54.0
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 1.1e-24 117.1 134 51.5
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 1.9e-24 116.3 139 46.0
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 2.4e-24 115.9 139 43.9
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 1.3e-22 110.2 101 50.5
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 2.3e-22 109.4 129 46.5
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 3.0e-22 109.0 145 42.8
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 5.6e-21 104.8 110 57.3
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 8.1e-20 100.9 87 65.5
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 1.8e-19 99.8 124 43.5
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 3.1e-19 99.0 201 35.8
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 3.1e-19 99.0 128 43.8
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 6.8e-19 97.8 105 48.6
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 2.0e-18 96.3 98 54.1
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 9.9e-18 94.0 85 52.9
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 2.9e-17 92.4 137 38.7
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 2.9e-17 92.4 139 36.7
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 5.4e-16 88.2 80 55.0
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 7.1e-16 87.8 91 51.6
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 2.7e-15 85.9 124 38.7
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 1.0e-14 84.0 132 35.6
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 7.3e-13 77.8 114 36.8
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 2.8e-12 75.9 61 57.4
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 1.1e-11 73.9 96 43.8
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 1.8e-11 73.2 117 37.6
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 9.9e-10 67.4 121 38.8
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.9e-08 63.2 69 44.9
Aqoxy2G03351 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.6e-07 60.1 57 57.9
MD08G1245200 Malus domestica HOM05D006640 ORTHO05D008078 2.7e-07 59.3 35 80.0
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 4.6e-07 58.5 48 58.3


User provided reference genes

Program Settings