Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 2.1e-77 292.4 152 100.0
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.5e-75 286.2 152 97.4
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 4.0e-73 278.1 152 94.7
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 6.7e-68 260.8 152 87.5
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 3.3e-67 258.5 152 87.5
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 7.4e-67 257.3 152 87.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 2.1e-66 255.8 152 86.2
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 1.4e-65 253.1 152 86.8
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.5e-64 249.6 152 86.2
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 4.5e-64 248.1 152 83.6
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 7.6e-64 247.3 152 82.2
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 5.5e-62 241.1 156 84.6
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.8e-60 236.1 156 83.3
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 2.3e-60 235.7 150 83.3
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 3.0e-60 235.3 156 82.7
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 3.0e-60 235.3 156 82.7
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 6.7e-60 234.2 148 81.8
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 8.7e-60 233.8 156 83.3
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 1.1e-59 233.4 156 84.6
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 1.9e-59 232.6 158 78.5
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.5e-59 232.3 156 82.1
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 3.3e-59 231.9 148 81.1
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 5.7e-59 231.1 156 82.7
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 5.7e-59 231.1 156 80.8
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 7.4e-59 230.7 157 79.6
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 7.4e-59 230.7 154 83.8
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.6e-58 229.6 156 82.7
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 8.2e-58 227.3 156 77.6
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 8.2e-58 227.3 150 80.7
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.1e-57 226.9 156 80.8
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.1e-57 226.9 156 78.2
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.1e-57 226.9 150 80.7
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 1.8e-57 226.1 156 78.8
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 3.1e-57 225.3 156 77.6
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 3.1e-57 225.3 152 78.3
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 5.3e-57 224.6 149 81.2
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 9.0e-57 223.8 156 80.8
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 4.5e-56 221.5 156 78.2
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 4.5e-56 221.5 156 78.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.5e-56 221.5 157 76.4
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 1.3e-55 219.9 156 76.9
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.7e-55 219.5 127 88.2
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.7e-55 219.5 156 76.3
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.7e-55 219.5 156 78.2
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.9e-55 218.8 156 77.6
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 5.0e-55 218.0 156 78.2
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 5.0e-55 218.0 156 77.6
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.5e-55 217.6 161 74.5
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.1e-54 216.9 116 93.1
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 1.4e-54 216.5 121 90.9
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.4e-54 216.5 153 75.8
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.4e-54 216.5 156 75.0
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 4.2e-54 214.9 156 73.7
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 4.2e-54 214.9 155 74.8
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 4.2e-54 214.9 161 74.5
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.5e-54 214.5 156 76.3
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 7.2e-54 214.2 143 76.2
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 9.4e-54 213.8 155 74.8
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-53 213.4 139 80.6
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 75.6
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.7e-53 212.2 117 90.6
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 1.0e-52 210.3 156 75.0
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.8e-52 209.5 117 89.7
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 2.3e-52 209.1 161 70.2
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.3e-52 209.1 153 75.8
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 3.0e-52 208.8 157 73.2
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 3.9e-52 208.4 157 73.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 3.9e-52 208.4 116 89.7
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 6.7e-52 207.6 116 87.1
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 1.1e-51 206.8 157 73.2
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.1e-51 206.8 147 76.2
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 1.1e-51 206.8 154 74.0
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.5e-51 206.5 123 82.9
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 1.5e-51 206.5 156 73.7
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 2.0e-51 206.1 156 74.4
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 2.0e-51 206.1 156 72.4
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 2.0e-51 206.1 157 73.9
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 2.0e-51 206.1 162 71.6
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 5.7e-51 204.5 157 72.0
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 5.7e-51 204.5 157 72.0
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 7.4e-51 204.1 115 88.7
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 9.7e-51 203.8 154 73.4
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 118 89.0
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 114 92.1
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 2.8e-50 202.2 153 73.2
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 3.7e-50 201.8 166 69.3
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 4.8e-50 201.4 159 73.6
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.4e-49 199.9 159 71.1
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 3.1e-49 198.7 117 86.3
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 5.2e-44 181.4 127 79.5
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.5e-43 179.9 130 78.5
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 2.0e-43 179.5 119 76.5
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 5.7e-43 177.9 126 77.0
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.4e-41 173.3 120 75.8
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 7.0e-41 171.0 131 69.5
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.2e-40 170.2 143 69.9
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 3.8e-39 165.2 118 70.3
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 5.0e-39 164.9 127 72.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 8.5e-39 164.1 128 71.9
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.5e-38 163.3 156 62.8
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.2e-37 160.2 104 76.0
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.4e-36 156.8 107 78.5
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 4.0e-36 155.2 137 65.7
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 4.0e-36 155.2 128 68.0
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.7e-35 151.4 87 86.2
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.4e-33 146.0 140 60.7
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 4.1e-33 145.2 131 61.1
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.0e-32 142.9 120 65.0
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.3e-15 87.0 64 73.4
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 9.5e-14 80.9 98 43.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.0e-12 77.4 139 38.1
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 1.9e-06 56.6 91 39.6


User provided reference genes

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