Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G062000 Phaseolus vulgaris HOM05D007890 ORTHO05D009945 3.2e-75 285.0 149 100.0
VMungo0540G1907 Vigna mungo HOM05D007890 ORTHO05D009945 2.6e-56 222.2 152 82.9
Glyma.08G336100 Glycine max HOM05D007890 ORTHO05D009945 3.3e-43 178.7 150 69.3
Lalb_Chr15g0082521 Lupinus albus HOM05D007890 ORTHO05D009945 8.1e-34 147.5 154 62.3
arahy.Tifrunner.gnm1.ann1.I2HDTW Arachis hypogaea HOM05D007890 ORTHO05D009945 1.8e-33 146.4 153 57.5
arahy.Tifrunner.gnm1.ann1.SWS7SX Arachis hypogaea HOM05D007890 ORTHO05D009945 2.4e-33 146.0 153 57.5
Lj6g0024098 Lotus japonicus HOM05D007890 ORTHO05D009945 5.8e-32 141.4 161 56.5
TPR.G14719 Trifolium pratense HOM05D005961 ORTHO05D007391 1.7e-28 129.8 152 55.3
Medtr3g061480 Medicago truncatula HOM05D007890 ORTHO05D009945 8.1e-26 120.9 152 55.3
Psat5g163960 Pisum sativum HOM05D007890 ORTHO05D009945 8.4e-23 110.9 145 51.7
Gorai.009G073500 Gossypium raimondii HOM05D007890 ORTHO05D009945 6.2e-18 94.7 131 46.6
QL01p004625 Quercus lobata HOM05D007890 ORTHO05D009945 8.1e-18 94.4 160 44.4
Gohir.D05G072500 Gossypium hirsutum HOM05D007890 ORTHO05D009945 1.4e-17 93.6 121 47.9
Eucgr.B03690 Eucalyptus grandis HOM05D007890 ORTHO05D009945 4.0e-17 92.0 103 51.5
Gohir.A05G069600 Gossypium hirsutum HOM05D007890 ORTHO05D009945 4.0e-17 92.0 121 47.1
Thecc.09G234600 Theobroma cacao HOM05D007890 ORTHO05D009945 4.0e-17 92.0 137 43.8
TWI32G0791 Tripterygium wilfordii HOM05D007890 ORTHO05D009945 5.3e-17 91.7 97 50.5
Ciclev10016956m.g Citrus clementina HOM05D007890 ORTHO05D009945 1.2e-16 90.5 145 40.0
MD11G1192200 Malus domestica HOM05D007890 ORTHO05D009945 1.2e-16 90.5 133 47.4
MSTRG.17595 Avicennia marina HOM05D007890 ORTHO05D009945 4.5e-16 88.6 98 53.1
MD03G1174000 Malus domestica HOM05D007890 ORTHO05D009945 5.8e-16 88.2 128 50.0
Cfa009778 Carpinus fangiana HOM05D007890 ORTHO05D009945 2.2e-15 86.3 151 41.7
CiPaw.13G159700 Carya illinoinensis HOM05D007890 ORTHO05D009945 1.1e-14 84.0 125 48.0
GSVIVG01025250001 Vitis vinifera HOM05D007890 ORTHO05D009945 4.2e-14 82.0 141 43.3
Actinidia06910 Actinidia chinensis HOM05D007890 ORTHO05D009945 7.1e-14 81.3 103 46.6
ClCG02G023170 Citrullus lanatus HOM05D007890 ORTHO05D009945 7.1e-14 81.3 147 40.8
MELO3C014589.2 Cucumis melo HOM05D007890 ORTHO05D009945 7.1e-14 81.3 147 40.1
Duzib170G0138 Durio zibethinus HOM05D007890 ORTHO05D009945 9.3e-14 80.9 106 47.2
FvH4_3g28750 Fragaria vesca HOM05D007890 ORTHO05D009945 9.3e-14 80.9 132 40.9
FAN11G2622 Fragaria x ananassa HOM05D007890 ORTHO05D009945 9.3e-14 80.9 132 40.9
Manes.13G093240 Manihot esculenta HOM05D007890 ORTHO05D009945 9.3e-14 80.9 110 48.2
vmacro04152 Vaccinium macrocarpon HOM05D007890 ORTHO05D009945 9.3e-14 80.9 125 45.6
FAN21G3432 Fragaria x ananassa HOM05D007890 ORTHO05D009945 1.6e-13 80.1 102 46.1
CsaV3_6G039340 Cucumis sativus L. HOM05D007890 ORTHO05D009945 2.7e-13 79.3 146 39.7
PGSC0003DMG400033336 Solanum tuberosum HOM05D007890 ORTHO05D009945 2.7e-13 79.3 150 38.7
Sed0013757 Sechium edule HOM05D007890 ORTHO05D009945 3.5e-13 79.0 109 45.9
FAN16G0819 Fragaria x ananassa HOM05D007890 ORTHO05D009945 4.6e-13 78.6 102 45.1
Hma1.2p1_0606F.1_g188050 Hydrangea macrophylla HOM05D007890 ORTHO05D009945 4.6e-13 78.6 100 46.0
RcHm_v2.0_Chr5g0052301 Rosa chinensis HOM05D007890 ORTHO05D009945 4.6e-13 78.6 109 48.6
Sopen11g025420 Solanum pennellii HOM05D007890 ORTHO05D009945 6.0e-13 78.2 152 36.2
Nitab4.5_0002741g0090 Nicotiana tabacum HOM05D007890 ORTHO05D009945 1.0e-12 77.4 138 39.9
Solyc11g065680.1 Solanum lycopersicum HOM05D007890 ORTHO05D009945 1.0e-12 77.4 124 41.1
Rhsim13G0220700 Rhododendron simsii HOM05D007890 ORTHO05D009945 1.3e-12 77.0 91 48.4
THA.LOC104801952 Tarenaya hassleriana HOM05D007890 ORTHO05D009945 1.3e-12 77.0 102 44.1
BcaC06g31267 Brassica carinata HOM05D007890 ORTHO05D009945 1.8e-12 76.6 133 38.3
Peaxi162Scf00004g02526 Petunia axillaris HOM05D007890 ORTHO05D009945 2.3e-12 76.3 140 40.0
SalBow5G2971 Salvia bowleyana HOM05D007890 ORTHO05D009945 3.9e-12 75.5 99 40.4
Atru.chr3.2706 Acer truncatum HOM05D007890 ORTHO05D009945 1.1e-11 73.9 105 41.9
Lj1P329T66 Lonicera japonica HOM05D007890 ORTHO05D009945 2.5e-11 72.8 95 44.2
Oeu025872.1 Olea europaea HOM05D007890 ORTHO05D009945 4.3e-11 72.0 102 45.1
Dinv36254 Davidia involucrata HOM05D007890 ORTHO05D009945 5.6e-11 71.6 104 43.3
Potri.001G257400 Populus trichocarpa HOM05D007890 ORTHO05D009945 7.4e-11 71.2 113 39.8
unitig_22.g5692 Utricularia gibba HOM05D007890 ORTHO05D009945 9.6e-11 70.9 97 43.3
Ah.06g194130 Amaranthus hybridus HOM05D007890 ORTHO05D009945 3.7e-10 68.9 97 47.4
TAR633G1231 Trochodendron aralioides HOM05D007890 ORTHO05D009945 4.8e-10 68.6 101 40.6
EL10Ac4g10243 Beta vulgaris HOM05D007890 ORTHO05D009945 1.1e-09 67.4 98 41.8
A06p43960 Brassica napus HOM05D001297 ORTHO05D001135 1.4e-09 67.0 139 35.3
BraA06t27271Z Brassica rapa HOM05D001297 ORTHO05D001135 1.4e-09 67.0 139 35.3
Migut.N02322 Erythranthe guttata HOM05D007890 ORTHO05D009945 1.4e-09 67.0 89 43.8
Sp2g13290 Schrenkiella parvula HOM05D007890 ORTHO05D009945 2.4e-09 66.2 134 37.3
BcaC06g34102 Brassica carinata HOM05D007890 ORTHO05D009945 3.1e-09 65.9 112 40.2
C07p32670 Brassica napus HOM05D001297 ORTHO05D001135 3.1e-09 65.9 112 40.2
Aa31LG2G8040 Aethionema arabicum HOM05D007890 ORTHO05D009945 4.0e-09 65.5 116 37.1
BolC7t43788H Brassica oleracea HOM05D001297 ORTHO05D001135 4.0e-09 65.5 113 39.8
Carub.0005s0083 Capsella rubella HOM05D007890 ORTHO05D009945 5.3e-09 65.1 128 35.9
Aqoxy2G00189 Aquilegia oxysepala HOM05D007890 ORTHO05D009945 1.5e-08 63.5 124 35.5
AL5G10980 Arabidopsis lyrata HOM05D007890 ORTHO05D009945 3.4e-08 62.4 130 35.4
AT2G01870 Arabidopsis thaliana HOM05D007890 ORTHO05D009945 3.4e-08 62.4 101 41.6
CARHR144430 Cardamine hirsuta HOM05D007890 ORTHO05D009945 7.6e-08 61.2 104 40.4
Prupe.4G250100 Prunus persica HOM05D007890 ORTHO05D009945 1.3e-07 60.5 100 40.0
CDE05G2272 Ceratophyllum demersum HOM05D007890 ORTHO05D009945 1.7e-07 60.1 111 38.7
PSO724G0038 Papaver somniferum HOM05D007890 ORTHO05D009945 1.7e-07 60.1 88 42.0
Thhalv10005015m.g Eutrema salsugineum HOM05D007890 ORTHO05D009945 2.9e-07 59.3 112 38.4
ECA233G3563 Erigeron canadensis HOM05D000013 ORTHO05D004590 8.4e-07 57.8 101 40.6
HanXRQChr08g0209341 Helianthus annuus HOM05D007890 ORTHO05D009945 8.4e-07 57.8 110 38.2
Lsat_1_v5_gn_2_29200 Lactuca sativa HOM05D007890 ORTHO05D009945 8.4e-07 57.8 97 39.2
PSO423G0105 Papaver somniferum HOM05D007890 ORTHO05D009945 8.4e-07 57.8 104 38.5
Sabra16G0157400 Salix brachista HOM05D007890 ORTHO05D009945 8.4e-07 57.8 141 33.3
Nitab4.5_0001587g0050 Nicotiana tabacum HOM05D007890 ORTHO05D009945 3.2e-06 55.8 39 64.1


User provided reference genes

Program Settings