Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 7.0e-132 474.2 275 100.0
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 1.5e-86 323.6 257 81.3
Glyma.08G329000 Glycine max HOM05D005849 ORTHO05D004704 5.1e-82 308.5 285 72.3
Glyma.18G077800 Glycine max HOM05D014115 ORTHO05D004704 2.5e-73 279.6 283 71.4
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 2.4e-52 209.9 282 58.5
Glyma.14G013800 Glycine max HOM05D014115 ORTHO05D004704 1.8e-42 177.2 288 50.0
Medtr3g058930 Medicago truncatula HOM05D014115 ORTHO05D004704 1.1e-36 157.9 297 40.1
Glyma.02G300100 Glycine max HOM05D014115 ORTHO05D004704 2.3e-34 150.2 276 43.8
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 5.1e-34 149.1 222 44.6
Psat5g169040 Pisum sativum HOM05D014115 ORTHO05D004704 1.4e-31 141.0 266 43.6
Medtr5g095710 Medicago truncatula HOM05D014115 ORTHO05D004704 1.3e-29 134.4 285 40.0
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 2.7e-27 126.7 254 39.8
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 2.7e-27 126.7 254 39.8
Phvul.008G278800 Phaseolus vulgaris HOM05D014115 ORTHO05D004704 7.9e-27 125.2 263 39.5
VMungo0647G1046 Vigna mungo HOM05D014115 ORTHO05D004704 7.9e-27 125.2 260 39.6
Ca_22134_v3 Cicer arietinum L. HOM05D014115 ORTHO05D004704 3.0e-26 123.2 266 47.4
TPR.G35467 Trifolium pratense HOM05D014115 ORTHO05D004704 1.1e-23 114.8 301 35.9
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 3.1e-23 113.2 254 39.4
TPR.G8608 Trifolium pratense HOM05D014115 ORTHO05D015996 3.1e-23 113.2 266 39.8
arahy.Tifrunner.gnm1.ann1.715EVP Arachis hypogaea HOM05D005849 ORTHO05D004704 1.1e-20 104.8 254 38.6
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.1e-20 104.8 262 36.6
Cfa020199 Carpinus fangiana HOM05D005849 ORTHO05D004704 2.7e-19 100.1 241 37.3
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea HOM05D005849 ORTHO05D004704 3.6e-19 99.8 249 39.8
Haze_09816 Corylus avellana HOM05D005849 ORTHO05D004704 6.1e-19 99.0 157 44.6
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 4.4e-17 92.8 268 35.1
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.3e-16 91.3 102 50.0
Gohir.A01G091100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.7e-16 89.7 97 50.5
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 8.2e-16 88.6 99 51.5
Gorai.002G099600 Gossypium raimondii HOM05D005849 ORTHO05D004704 1.4e-15 87.8 97 49.5
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 1.8e-15 87.4 99 53.5
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 2.4e-15 87.0 260 31.5
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 2.4e-15 87.0 97 53.6
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 4.1e-15 86.3 93 54.8
Manes.13G061900 Manihot esculenta HOM05D005849 ORTHO05D004704 3.5e-14 83.2 79 59.5
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 7.7e-14 82.0 277 32.1
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.0e-13 81.6 253 32.0
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 1.0e-13 81.6 253 32.0
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 2.9e-13 80.1 287 30.3
TWI38G0138 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 3.8e-13 79.7 264 32.6
Ciclev10009298m.g Citrus clementina HOM05D005849 ORTHO05D004704 1.1e-12 78.2 282 31.6
Manes.15G060700 Manihot esculenta HOM05D005849 ORTHO05D004704 1.1e-12 78.2 276 31.2
Manes.03G140566 Manihot esculenta HOM05D005849 ORTHO05D004704 1.5e-12 77.8 258 32.2
Manes.12G064702 Manihot esculenta HOM05D005849 ORTHO05D004704 1.5e-12 77.8 92 54.3
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 2.5e-12 77.0 272 32.0
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 3.2e-12 76.6 264 30.7
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.2e-12 76.6 80 52.5
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 3.2e-12 76.6 80 52.5
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 3.2e-12 76.6 70 58.6
Cpa.g.sc12.153 Carica papaya HOM05D005849 ORTHO05D004704 7.2e-12 75.5 284 33.8
Prupe.4G242400 Prunus persica HOM05D005849 ORTHO05D004704 7.2e-12 75.5 199 36.7
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 7.2e-12 75.5 98 50.0
TWI18G0644 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 9.4e-12 75.1 81 56.8
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.2e-11 74.7 249 31.7
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 1.2e-11 74.7 106 47.2
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 2.1e-11 73.9 265 33.2
Manes.03G140700 Manihot esculenta HOM05D005849 ORTHO05D004704 2.7e-11 73.6 255 31.0
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 8.0e-11 72.0 252 30.2
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 8.0e-11 72.0 94 46.8
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 8.0e-11 72.0 79 53.2
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 1.0e-10 71.6 232 31.0
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 1.4e-10 71.2 97 47.4
Ciclev10018021m.g Citrus clementina HOM05D005849 ORTHO05D004704 3.0e-10 70.1 84 54.8
CANSAT11G2057 Cannabis sativa HOM05D005849 ORTHO05D004704 5.2e-10 69.3 262 31.3
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 5.2e-10 69.3 97 45.4
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 8.8e-10 68.6 106 39.6
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 1.5e-09 67.8 247 30.4
Lj8P178T38 Lonicera japonica HOM05D005849 ORTHO05D004704 2.0e-09 67.4 98 46.9
Cpa.g.sc136.30 Carica papaya HOM05D005849 ORTHO05D004704 2.6e-09 67.0 85 51.8
Peaxi162Scf00802g00130 Petunia axillaris HOM05D005849 ORTHO05D004704 4.4e-09 66.2 77 48.1
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 5.7e-09 65.9 96 45.8
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 5.7e-09 65.9 254 31.9
Nn1g04368 Nelumbo nucifera HOM05D005849 ORTHO05D004704 9.7e-09 65.1 70 55.7
CiPaw.03G281900 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.3e-08 64.7 83 48.2
Dinv21298 Davidia involucrata HOM05D005849 ORTHO05D004704 1.3e-08 64.7 96 45.8
PSO541G2883 Papaver somniferum HOM05D005849 ORTHO05D004704 1.3e-08 64.7 260 29.6
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 1.3e-08 64.7 111 41.4
Actinidia35203 Actinidia chinensis HOM05D005849 ORTHO05D004704 2.2e-08 63.9 92 45.7
Psat5g104280 Pisum sativum HOM05D005849 ORTHO05D004704 2.8e-08 63.5 94 46.8
Glyma.13G006500 Glycine max HOM05D005849 ORTHO05D004704 3.7e-08 63.2 103 45.6
LjContig00081g0015024 Lotus japonicus HOM05D005849 ORTHO05D004704 4.8e-08 62.8 85 45.9
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 8.2e-08 62.0 70 47.1
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 1.1e-07 61.6 89 44.9
PGR083G2364 Punica granatum HOM05D005849 ORTHO05D004704 1.1e-07 61.6 81 45.7
PSO675G3647 Papaver somniferum HOM05D005849 ORTHO05D004704 1.8e-07 60.8 260 28.1
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 2.4e-07 60.5 266 29.7
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 3.1e-07 60.1 81 48.1
TPR.G11064 Trifolium pratense HOM05D005849 ORTHO05D004704 3.1e-07 60.1 104 44.2
TPR.G35904 Trifolium pratense HOM05D005849 ORTHO05D004704 4.1e-07 59.7 96 41.7
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 7.0e-07 58.9 101 39.6
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 7.0e-07 58.9 101 39.6
Nitab4.5_0000006g0660 Nicotiana tabacum HOM05D005849 ORTHO05D004704 7.0e-07 58.9 81 43.2
Medtr3g082780 Medicago truncatula HOM05D005849 ORTHO05D004704 1.2e-06 58.2 86 45.3
MELO3C025957.2 Cucumis melo HOM05D005849 ORTHO05D004704 1.6e-06 57.8 83 45.8
VMungo0540G2501 Vigna mungo HOM05D005849 ORTHO05D004704 2.7e-06 57.0 78 50.0
DCAR_012893 Daucus carota HOM05D005849 ORTHO05D004704 5.9e-06 55.8 92 43.5
Phvul.007G121090 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 7.7e-06 55.5 91 46.2


User provided reference genes

Program Settings