Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 2.0e-43 178.7 92 100.0
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 1.6e-35 152.5 99 85.9
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 5.5e-33 144.1 99 80.8
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 1.8e-31 139.0 87 82.8
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 1.3e-26 122.9 103 66.0
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 6.5e-26 120.6 87 73.6
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 3.2e-25 118.2 87 72.4
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 7.2e-25 117.1 86 69.8
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 5.2e-23 110.9 87 67.8
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 1.5e-22 109.4 87 66.7
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 2.0e-22 109.0 86 64.0
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 2.0e-22 109.0 86 64.0
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 1.7e-21 105.9 101 59.4
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 2.2e-21 105.5 86 64.0
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 2.8e-21 105.1 87 67.8
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 2.8e-21 105.1 87 67.8
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 3.7e-21 104.8 87 65.5
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 6.3e-21 104.0 101 59.4
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 1.8e-20 102.4 90 63.3
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 2.4e-20 102.1 100 60.0
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 2.4e-20 102.1 87 66.7
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 4.1e-20 101.3 87 63.2
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 4.1e-20 101.3 73 79.5
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 7.0e-20 100.5 87 63.2
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 1.2e-19 99.8 87 62.1
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 2.0e-19 99.0 87 60.9
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 2.7e-19 98.6 87 63.2
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 3.5e-19 98.2 86 62.8
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 4.5e-19 97.8 91 57.1
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 4.5e-19 97.8 87 64.4
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 5.9e-19 97.4 93 58.1
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 5.9e-19 97.4 87 62.1
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 7.7e-19 97.1 87 60.9
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 7.7e-19 97.1 87 60.9
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 7.7e-19 97.1 87 60.9
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 1.7e-18 95.9 88 58.0
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 1.7e-18 95.9 87 60.9
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.7e-18 95.9 87 60.9
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.7e-18 95.9 87 60.9
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 1.7e-18 95.9 86 65.1
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 2.2e-18 95.5 88 58.0
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 2.2e-18 95.5 87 62.1
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 2.9e-18 95.1 87 60.9
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 2.9e-18 95.1 88 63.6
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 3.8e-18 94.7 89 60.7
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 3.8e-18 94.7 89 57.3
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 5.0e-18 94.4 97 57.7
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 5.0e-18 94.4 88 58.0
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 5.0e-18 94.4 87 60.9
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 5.0e-18 94.4 87 62.1
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 5.0e-18 94.4 87 63.2
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 6.5e-18 94.0 89 57.3
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 6.5e-18 94.0 103 55.3
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 6.5e-18 94.0 88 60.2
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 8.5e-18 93.6 89 57.3
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 8.5e-18 93.6 87 60.9
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.1e-17 93.2 88 58.0
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 1.1e-17 93.2 88 55.7
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 1.5e-17 92.8 89 58.4
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 1.5e-17 92.8 89 61.8
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 1.9e-17 92.4 87 60.9
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 2.5e-17 92.0 88 60.2
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 2.5e-17 92.0 102 54.9
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 2.5e-17 92.0 87 60.9
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 2.5e-17 92.0 87 58.6
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 3.2e-17 91.7 89 55.1
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 3.2e-17 91.7 89 60.7
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 3.2e-17 91.7 87 57.5
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 4.2e-17 91.3 89 56.2
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 4.2e-17 91.3 88 58.0
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 5.5e-17 90.9 89 59.6
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 7.2e-17 90.5 89 55.1
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 9.5e-17 90.1 90 56.7
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.2e-16 89.7 89 61.8
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 1.2e-16 89.7 87 56.3
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 1.2e-16 89.7 87 60.9
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 1.6e-16 89.4 88 54.5
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 1.6e-16 89.4 87 57.5
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 1.6e-16 89.4 88 61.4
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 2.1e-16 89.0 88 58.0
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 2.1e-16 89.0 87 59.8
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 2.1e-16 89.0 85 57.6
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 2.1e-16 89.0 55 80.0
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 2.8e-16 88.6 87 54.0
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 2.8e-16 88.6 87 54.0
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 2.8e-16 88.6 87 54.0
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 2.8e-16 88.6 87 54.0
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 3.6e-16 88.2 88 59.1
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 3.6e-16 88.2 88 52.3
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 3.6e-16 88.2 88 52.3
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 4.7e-16 87.8 89 55.1
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 4.7e-16 87.8 86 58.1
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 4.7e-16 87.8 86 58.1
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 8.0e-16 87.0 88 53.4
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 8.0e-16 87.0 88 53.4
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 1.0e-15 86.7 87 51.7
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 1.0e-15 86.7 87 55.2
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 1.0e-15 86.7 88 58.0
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 1.0e-15 86.7 87 54.0
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 1.8e-15 85.9 97 53.6
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 2.3e-15 85.5 89 53.9
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 3.0e-15 85.1 88 52.3
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 3.0e-15 85.1 88 54.5
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 5.2e-15 84.3 90 54.4
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 5.2e-15 84.3 87 56.3
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 5.2e-15 84.3 92 55.4
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 8.8e-15 83.6 88 58.0
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 2.0e-14 82.4 89 55.1
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 2.0e-14 82.4 89 56.2
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 2.6e-14 82.0 90 54.4
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 5.7e-14 80.9 85 56.5
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 7.5e-14 80.5 94 47.9
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 1.3e-13 79.7 87 49.4
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 2.2e-13 79.0 94 50.0
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 2.8e-13 78.6 65 67.7
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 6.3e-13 77.4 96 52.1
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 3.1e-12 75.1 54 70.4
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 4.1e-12 74.7 89 51.7
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.6e-11 72.8 91 50.5
QL04p026254 Quercus lobata HOM05D005488 ORTHO05D006568 5.0e-10 67.8 69 58.0
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 5.6e-09 64.3 119 37.8
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 9.5e-09 63.5 84 45.2
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 1.2e-08 63.2 55 56.4
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 4.7e-08 61.2 80 46.2
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 1.0e-07 60.1 51 54.9
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 1.8e-07 59.3 52 63.5
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 2.3e-07 58.9 53 56.6
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 3.0e-07 58.5 61 45.9
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 4.0e-07 58.2 41 73.2
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 1.2e-06 56.6 40 70.0
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 2.0e-06 55.8 41 63.4
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 3.4e-06 55.1 59 47.5
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 5.7e-06 54.3 40 67.5


User provided reference genes

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