Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G053700 Phaseolus vulgaris HOM05D007725 ORTHO05D009774 1.3e-122 443.7 363 100.0
VMungo0540G1375 Vigna mungo HOM05D007725 ORTHO05D009774 4.0e-119 432.2 363 97.0
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 5.8e-110 401.7 363 93.1
Ca_26464_v3 Cicer arietinum L. HOM05D007725 ORTHO05D009774 1.4e-68 264.2 355 66.5
arahy.Tifrunner.gnm1.ann1.LCTM2T Arachis hypogaea HOM05D007725 ORTHO05D009774 1.1e-65 254.6 363 70.0
COL.COLO4_09791 Corchorus olitorius HOM05D007725 ORTHO05D009774 1.1e-65 254.6 363 70.0
Psat5g175640 Pisum sativum HOM05D007725 ORTHO05D009774 2.0e-65 253.8 363 72.7
arahy.Tifrunner.gnm1.ann1.TWJV4J Arachis hypogaea HOM05D007725 ORTHO05D009774 2.8e-64 250.0 363 69.4
Medtr3g056580 Medicago truncatula HOM05D007725 ORTHO05D009774 4.1e-63 246.1 353 53.0
arahy.Tifrunner.gnm1.ann1.Q8DMES Arachis hypogaea HOM05D007725 ORTHO05D009774 1.9e-60 237.3 363 70.0
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 3.2e-60 236.5 355 60.3
CSS0027076 Camellia sinensis var. sinensis HOM05D007725 ORTHO05D009774 1.8e-58 230.7 363 58.7
ClCG09G021110 Citrullus lanatus HOM05D007725 ORTHO05D009774 8.8e-58 228.4 363 68.6
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 1.7e-56 224.2 367 41.7
Cfa020227 Carpinus fangiana HOM05D007725 ORTHO05D009774 1.8e-55 220.7 378 67.5
Nitab4.5_0002517g0030 Nicotiana tabacum HOM05D007725 ORTHO05D009774 2.5e-52 210.3 363 59.2
Lj2g0017250 Lotus japonicus HOM05D007725 ORTHO05D009774 7.2e-52 208.8 359 50.1
GSVIVG01037784001 Vitis vinifera HOM05D007725 ORTHO05D009774 1.2e-51 208.0 367 65.4
Peaxi162Scf00955g00014 Petunia axillaris HOM05D007725 ORTHO05D009774 2.1e-51 207.2 363 58.7
Gohir.A11G277300 Gossypium hirsutum HOM05D007725 ORTHO05D009774 6.1e-51 205.7 355 52.1
Gorai.007G311000 Gossypium raimondii HOM05D007725 ORTHO05D009774 2.3e-50 203.8 355 47.6
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 1.5e-49 201.1 364 48.4
Lj1P886T16 Lonicera japonica HOM05D007725 ORTHO05D009774 4.4e-49 199.5 363 65.3
Lj6g0024671 Lotus japonicus HOM05D007725 ORTHO05D009774 1.4e-47 194.5 362 64.6
PSO478G1598 Papaver somniferum HOM05D007725 ORTHO05D009774 3.1e-47 193.4 353 65.2
Sopen12g007550 Solanum pennellii HOM05D007725 ORTHO05D009774 3.1e-47 193.4 359 57.9
PGSC0003DMG402029798 Solanum tuberosum HOM05D007725 ORTHO05D009774 1.2e-46 191.4 359 58.2
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 2.0e-46 190.7 363 58.4
Nitab4.5_0000163g0300 Nicotiana tabacum HOM05D007725 ORTHO05D009774 3.5e-46 189.9 363 65.3
Haze_09790 Corylus avellana HOM05D007725 ORTHO05D009774 4.5e-46 189.5 376 64.6
GSVIVG01037783001 Vitis vinifera HOM05D007725 ORTHO05D009774 1.0e-45 188.3 361 56.0
Lj6g0016094 Lotus japonicus HOM05D007725 ORTHO05D009774 1.7e-45 187.6 361 64.8
DCAR_022605 Daucus carota HOM05D007725 ORTHO05D009774 2.2e-45 187.2 344 54.7
Solyc12g015650.3 Solanum lycopersicum HOM05D007725 ORTHO05D009774 6.5e-45 185.7 359 57.1
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 1.1e-44 184.9 363 64.7
TAR624G0507 Trochodendron aralioides HOM05D007725 ORTHO05D009774 1.1e-44 184.9 363 65.0
Sed0002917 Sechium edule HOM05D007725 ORTHO05D009774 1.6e-43 181.0 344 66.9
MELO3C024908.2 Cucumis melo HOM05D007725 ORTHO05D009774 2.1e-43 180.6 339 65.5
PGR031G2940 Punica granatum HOM05D007725 ORTHO05D009774 2.7e-43 180.3 367 50.4
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 8.0e-43 178.7 196 50.0
MSTRG.15782 Avicennia marina HOM05D007725 ORTHO05D009774 1.8e-42 177.6 363 63.4
Nn1g07446 Nelumbo nucifera HOM05D007725 ORTHO05D009774 4.0e-42 176.4 363 52.3
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 5.2e-42 176.0 363 59.8
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 6.7e-42 175.6 351 63.2
HanXRQChr11g0333971 Helianthus annuus HOM05D007725 ORTHO05D009774 1.2e-41 174.9 360 51.7
EL10Ac4g07611 Beta vulgaris HOM05D007725 ORTHO05D009774 5.7e-41 172.6 243 70.4
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 2.2e-40 170.6 356 61.5
Nn1g03245 Nelumbo nucifera HOM05D007725 ORTHO05D009774 4.8e-40 169.5 360 55.6
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 2.4e-39 167.2 354 62.7
CsaV3_7G018510 Cucumis sativus L. HOM05D007725 ORTHO05D009774 2.4e-39 167.2 363 63.1
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 1.6e-38 164.5 359 61.6
Dinv10315 Davidia involucrata HOM05D007725 ORTHO05D009774 4.5e-38 162.9 344 65.7
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 1.0e-37 161.8 358 62.3
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 1.0e-37 161.8 359 61.8
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 1.3e-37 161.4 358 61.5
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 2.2e-37 160.6 359 61.8
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 2.2e-37 160.6 359 61.8
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 2.9e-37 160.2 359 61.8
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 5.0e-37 159.5 359 62.1
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 5.0e-37 159.5 350 61.1
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 2.5e-36 157.1 350 61.1
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 2.5e-36 157.1 350 61.1
ATR1149G149 Amborella trichopoda HOM05D007725 ORTHO05D009774 4.2e-36 156.4 359 61.6
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 4.2e-36 156.4 350 61.4
Migut.M01753 Erythranthe guttata HOM05D007725 ORTHO05D009774 9.4e-36 155.2 355 62.3
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 1.2e-35 154.8 361 59.6
AUR62040655 Chenopodium quinoa HOM05D007725 ORTHO05D009774 1.2e-35 154.8 359 61.6
Cc05_g14730 Coffea canephora HOM05D007725 ORTHO05D009774 4.0e-34 149.8 359 61.3
Nn1g03425 Nelumbo nucifera HOM05D007725 ORTHO05D009774 8.8e-34 148.7 355 63.7
AUR62017062 Chenopodium quinoa HOM05D007725 ORTHO05D009774 5.7e-33 146.0 359 60.2
QL08p005480 Quercus lobata HOM05D007725 ORTHO05D009774 7.5e-33 145.6 185 54.1
Lj6g0003901 Lotus japonicus HOM05D007725 ORTHO05D009774 2.8e-32 143.7 246 64.2
SEGI_22467 Sequoiadendron giganteum HOM05D007725 ORTHO05D009774 1.4e-31 141.4 351 60.4
SGA_v2.0_scaffold168G38532 Striga asiatica HOM05D007725 ORTHO05D009774 8.6e-29 132.1 355 30.4
SalBow8G2031 Salvia bowleyana HOM05D007725 ORTHO05D009774 9.5e-28 128.6 359 59.9
TPR.G1910 Trifolium pratense HOM05D007725 ORTHO05D009774 6.6e-21 105.9 74 70.3
Oeu005490.1 Olea europaea HOM05D007725 ORTHO05D009774 1.0e-18 98.6 103 49.5
HPP92_006089 Vanilla planifolia HOM05D007725 ORTHO05D009774 7.5e-17 92.4 68 64.7
BcaC02g11617 Brassica carinata HOM05D007725 ORTHO05D009774 4.3e-12 76.6 50 74.0
BraA05t21757Z Brassica rapa HOM05D007725 ORTHO05D009774 2.2e-08 64.3 94 40.4
Thecc.07G022000 Theobroma cacao HOM05D007725 ORTHO05D009774 3.7e-08 63.5 72 45.8


User provided reference genes

Program Settings