Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G051900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 8.5e-142 506.9 240 100.0
Phvul.006G051600 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.9e-133 479.2 240 93.3
Phvul.006G052100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.0e-131 471.9 240 92.9
Phvul.004G062200 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.0e-127 459.1 240 90.4
Phvul.001G265100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 6.5e-126 454.1 240 90.0
Phvul.003G159000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.5e-125 452.2 240 89.2
Phvul.004G062300 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.7e-124 448.7 240 87.9
Phvul.002G276000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 8.8e-123 443.7 240 87.1
Phvul.001G264800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.5e-119 431.8 232 88.4
Phvul.001G264900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.7e-111 405.6 240 82.1
Phvul.006G051800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.1e-96 355.5 212 82.5
Glyma.16G161700 Glycine max HOM05D007822 ORTHO05D009360 2.8e-76 289.3 230 60.4
Lalb_Chr23g0273121 Lupinus albus HOM05D007822 ORTHO05D009360 1.8e-67 260.0 227 52.9
Glyma.15G092300 Glycine max HOM05D007822 ORTHO05D009360 2.0e-66 256.5 230 55.2
Medtr3g084690 Medicago truncatula HOM05D007822 ORTHO05D009360 6.4e-65 251.5 241 48.5
TPR.G18087 Trifolium pratense HOM05D007822 ORTHO05D009360 9.2e-64 247.7 240 47.9
Medtr1g016400 Medicago truncatula HOM05D007822 ORTHO05D009360 1.2e-63 247.3 229 49.3
Medtr1g017120 Medicago truncatula HOM05D007822 ORTHO05D009360 2.7e-63 246.1 229 48.9
TPR.G19769 Trifolium pratense HOM05D007822 ORTHO05D009360 4.6e-63 245.4 243 48.1
Ca_08383_v3 Cicer arietinum L. HOM05D007822 ORTHO05D009360 6.6e-62 241.5 235 48.9
TPR.G18082 Trifolium pratense HOM05D007822 ORTHO05D009360 8.6e-62 241.1 241 46.5
Psat2g094240 Pisum sativum HOM05D007822 ORTHO05D009360 7.3e-61 238.0 226 49.6
Dinv16858 Davidia involucrata HOM05D007822 ORTHO05D009360 2.0e-58 229.9 229 47.2
arahy.Tifrunner.gnm1.ann1.A760R9 Arachis hypogaea HOM05D007822 ORTHO05D009360 4.4e-58 228.8 245 48.2
Medtr2g450270 Medicago truncatula HOM05D007822 ORTHO05D009360 9.3e-56 221.1 241 44.4
arahy.Tifrunner.gnm1.ann1.HWH8LL Arachis hypogaea HOM05D007822 ORTHO05D009360 2.5e-53 213.0 240 45.8
arahy.Tifrunner.gnm1.ann1.SE6DU5 Arachis hypogaea HOM05D007822 ORTHO05D009360 4.8e-52 208.8 235 45.1
TPR.G34642 Trifolium pratense HOM05D007822 ORTHO05D009360 6.9e-51 204.9 206 49.0
arahy.Tifrunner.gnm1.ann1.GB1I3E Arachis hypogaea HOM05D007822 ORTHO05D009360 9.0e-51 204.5 225 45.8
VMungo1215G0886 Vigna mungo HOM05D007822 ORTHO05D009360 3.8e-49 199.1 237 43.0
Glyma.03G020200 Glycine max HOM05D007822 ORTHO05D009360 6.4e-49 198.4 240 44.2
arahy.Tifrunner.gnm1.ann1.6X56G5 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.1e-48 197.6 221 46.2
arahy.Tifrunner.gnm1.ann1.Z44N3D Arachis hypogaea HOM05D007822 ORTHO05D009360 1.1e-48 197.6 238 45.0
Prupe.2G273800 Prunus persica HOM05D007822 ORTHO05D009360 1.9e-48 196.8 240 42.1
TPR.G33992 Trifolium pratense HOM05D007822 ORTHO05D009360 3.2e-48 196.1 237 41.4
arahy.Tifrunner.gnm1.ann1.JJB16R Arachis hypogaea HOM05D007822 ORTHO05D009360 7.1e-48 194.9 235 46.0
arahy.Tifrunner.gnm1.ann1.2QW5CK Arachis hypogaea HOM05D007822 ORTHO05D009360 6.7e-46 188.3 245 43.7
Lalb_Chr07g0186991 Lupinus albus HOM05D007822 ORTHO05D009360 6.7e-46 188.3 235 43.4
arahy.Tifrunner.gnm1.ann1.N9Y9CH Arachis hypogaea HOM05D007822 ORTHO05D009360 8.1e-44 181.4 243 41.6
Rhsim01G0262200 Rhododendron simsii HOM05D007822 ORTHO05D009360 8.1e-44 181.4 235 39.6
arahy.Tifrunner.gnm1.ann1.00A0K2 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.4e-43 179.9 208 45.7
arahy.Tifrunner.gnm1.ann1.IQQ1WH Arachis hypogaea HOM05D007822 ORTHO05D009360 2.4e-43 179.9 200 47.0
arahy.Tifrunner.gnm1.ann1.30JHYY Arachis hypogaea HOM05D007822 ORTHO05D009360 3.1e-43 179.5 238 42.0
Oeu042537.1 Olea europaea HOM05D007822 ORTHO05D009360 1.5e-42 177.2 228 37.3
Medtr6g034615 Medicago truncatula HOM05D007822 ORTHO05D009360 4.9e-41 172.2 170 47.6
arahy.Tifrunner.gnm1.ann1.97QIN4 Arachis hypogaea HOM05D007822 ORTHO05D009360 4.2e-40 169.1 189 45.5
arahy.Tifrunner.gnm1.ann1.B28JH2 Arachis hypogaea HOM05D007822 ORTHO05D009360 5.1e-38 162.2 187 43.9
TPR.G34648 Trifolium pratense HOM05D007822 ORTHO05D009360 6.7e-38 161.8 163 46.6
Rhsim09G0189100 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.6e-36 157.1 232 39.7
TPR.G19772 Trifolium pratense HOM05D007822 ORTHO05D009360 8.2e-36 154.8 195 40.0
arahy.Tifrunner.gnm1.ann1.UHL69B Arachis hypogaea HOM05D007822 ORTHO05D009360 1.5e-34 150.6 193 43.0
TPR.G33966 Trifolium pratense HOM05D007822 ORTHO05D009360 1.3e-33 147.5 127 50.4
DCAR_014640 Daucus carota HOM05D007822 ORTHO05D009360 9.7e-29 131.3 197 38.1
RhsimUnG0026200 Rhododendron simsii HOM05D007822 ORTHO05D009360 9.7e-29 131.3 189 38.1
Sc09g0001460 Simmondsia chinensis HOM05D007822 ORTHO05D009360 9.7e-29 131.3 212 36.8
Rhsim09G0015300 Rhododendron simsii HOM05D007822 ORTHO05D009360 4.8e-28 129.0 225 37.3
TPR.G11880 Trifolium pratense HOM05D000005 ORTHO05D009360 4.8e-28 129.0 141 44.7
Sc09g0001470 Simmondsia chinensis HOM05D007822 ORTHO05D009360 6.3e-28 128.6 235 34.9
arahy.Tifrunner.gnm1.ann1.UXA4FW Arachis hypogaea HOM05D007822 ORTHO05D009360 1.1e-27 127.9 142 43.0
Psat5g099000 Pisum sativum HOM05D007822 ORTHO05D009360 2.0e-26 123.6 125 46.4
Lalb_Chr23g0273131 Lupinus albus HOM05D007822 ORTHO05D009360 7.6e-26 121.7 103 56.3
Lalb_Chr23g0273141 Lupinus albus HOM05D007822 ORTHO05D009360 2.7e-23 113.2 101 53.5
arahy.Tifrunner.gnm1.ann1.JV62Q3 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.3e-22 110.2 130 42.3
VMungo1309G2027 Vigna mungo HOM05D007822 ORTHO05D009360 1.1e-21 107.8 122 43.4
TPR.G18088 Trifolium pratense HOM05D007822 ORTHO05D009360 4.1e-19 99.4 92 48.9
Lalb_Chr23g0273151 Lupinus albus HOM05D007822 ORTHO05D009360 2.5e-16 90.1 78 52.6
Medtr6g060160 Medicago truncatula HOM05D007822 ORTHO05D009360 5.5e-16 89.0 94 43.6
TPR.G8151 Trifolium pratense HOM05D007822 ORTHO05D009360 4.7e-15 85.9 155 36.8
Medtr6g034605 Medicago truncatula HOM05D007822 ORTHO05D009360 3.0e-14 83.2 107 38.3
Sc09g0001480 Simmondsia chinensis HOM05D007822 ORTHO05D009360 3.3e-13 79.7 126 36.5
arahy.Tifrunner.gnm1.ann1.WW5NKJ Arachis hypogaea HOM05D007822 ORTHO05D009360 2.4e-11 73.6 73 49.3
TPR.G5267 Trifolium pratense HOM05D007822 ORTHO05D009360 5.3e-11 72.4 72 48.6
Sc01g0006370 Simmondsia chinensis HOM05D022095 ORTHO05D009360 2.2e-09 67.0 100 32.0
Medtr8g080950 Medicago truncatula HOM05D007822 ORTHO05D009360 1.4e-08 64.3 181 24.9
Sc19g0005840 Simmondsia chinensis HOM05D022095 ORTHO05D009360 3.2e-08 63.2 101 32.7
Actinidia08199 Actinidia chinensis HOM05D007822 ORTHO05D009360 9.4e-08 61.6 91 38.5
Sc06g0004600 Simmondsia chinensis HOM05D022095 ORTHO05D009360 2.1e-07 60.5 156 29.5


User provided reference genes

Program Settings