Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G051800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.2e-185 652.1 318 100.0
Phvul.006G052100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.8e-155 552.7 321 86.0
Phvul.001G265100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.8e-153 544.7 324 84.0
Phvul.004G062200 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 6.3e-153 544.3 321 84.7
Phvul.003G159000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.1e-152 541.6 321 83.8
Phvul.006G051600 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.2e-146 523.5 319 81.5
Phvul.002G276000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 6.3e-145 517.7 321 81.0
Phvul.004G062300 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.1e-144 515.4 308 83.4
Phvul.001G264800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 8.6e-142 507.3 325 79.7
Phvul.001G264900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.3e-133 478.4 323 77.4
Phvul.006G051900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.1e-95 353.2 212 82.5
Glyma.16G161700 Glycine max HOM05D007822 ORTHO05D009360 5.6e-85 318.5 328 54.0
Glyma.15G092300 Glycine max HOM05D007822 ORTHO05D009360 3.4e-74 282.7 325 49.5
Medtr1g016400 Medicago truncatula HOM05D007822 ORTHO05D009360 1.2e-66 257.7 320 45.3
Medtr1g017120 Medicago truncatula HOM05D007822 ORTHO05D009360 2.0e-66 256.9 320 45.0
Medtr3g084690 Medicago truncatula HOM05D007822 ORTHO05D009360 4.5e-66 255.8 318 43.7
TPR.G18087 Trifolium pratense HOM05D007822 ORTHO05D009360 6.5e-65 251.9 324 42.9
Glyma.03G020200 Glycine max HOM05D007822 ORTHO05D009360 4.2e-64 249.2 319 43.9
TPR.G19769 Trifolium pratense HOM05D007822 ORTHO05D009360 7.9e-63 245.0 308 43.5
Ca_08383_v3 Cicer arietinum L. HOM05D007822 ORTHO05D009360 1.8e-62 243.8 327 42.5
TPR.G18082 Trifolium pratense HOM05D007822 ORTHO05D009360 1.3e-60 237.7 319 41.1
Dinv16858 Davidia involucrata HOM05D007822 ORTHO05D009360 2.7e-55 219.9 319 38.9
TPR.G33992 Trifolium pratense HOM05D007822 ORTHO05D009360 6.1e-55 218.8 307 40.4
arahy.Tifrunner.gnm1.ann1.A760R9 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.4e-54 217.6 329 40.7
VMungo1215G0886 Vigna mungo HOM05D007822 ORTHO05D009360 8.8e-54 214.9 324 39.8
TPR.G34642 Trifolium pratense HOM05D007822 ORTHO05D009360 1.5e-53 214.2 337 40.1
arahy.Tifrunner.gnm1.ann1.6X56G5 Arachis hypogaea HOM05D007822 ORTHO05D009360 8.2e-52 208.4 331 40.2
Medtr2g450270 Medicago truncatula HOM05D007822 ORTHO05D009360 1.3e-49 201.1 326 37.7
TPR.G34648 Trifolium pratense HOM05D007822 ORTHO05D009360 2.9e-49 199.9 273 41.8
Lalb_Chr07g0186991 Lupinus albus HOM05D007822 ORTHO05D009360 6.5e-49 198.7 321 39.9
Lalb_Chr23g0273121 Lupinus albus HOM05D007822 ORTHO05D009360 1.1e-48 198.0 202 48.5
arahy.Tifrunner.gnm1.ann1.JJB16R Arachis hypogaea HOM05D007822 ORTHO05D009360 3.2e-48 196.4 327 39.1
arahy.Tifrunner.gnm1.ann1.N9Y9CH Arachis hypogaea HOM05D007822 ORTHO05D009360 9.4e-48 194.9 307 40.1
arahy.Tifrunner.gnm1.ann1.HWH8LL Arachis hypogaea HOM05D007822 ORTHO05D009360 3.6e-47 193.0 328 37.8
arahy.Tifrunner.gnm1.ann1.00A0K2 Arachis hypogaea HOM05D007822 ORTHO05D009360 6.1e-47 192.2 319 38.6
Prupe.2G273800 Prunus persica HOM05D007822 ORTHO05D009360 1.3e-44 184.5 329 37.7
Psat2g094240 Pisum sativum HOM05D007822 ORTHO05D009360 2.8e-44 183.3 203 46.3
arahy.Tifrunner.gnm1.ann1.Z44N3D Arachis hypogaea HOM05D007822 ORTHO05D009360 3.7e-44 183.0 328 37.8
arahy.Tifrunner.gnm1.ann1.30JHYY Arachis hypogaea HOM05D007822 ORTHO05D009360 3.5e-42 176.4 312 37.2
arahy.Tifrunner.gnm1.ann1.2QW5CK Arachis hypogaea HOM05D007822 ORTHO05D009360 2.2e-41 173.7 330 36.7
arahy.Tifrunner.gnm1.ann1.B28JH2 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.2e-41 173.7 312 37.8
Rhsim01G0262200 Rhododendron simsii HOM05D007822 ORTHO05D009360 4.2e-40 169.5 306 34.6
arahy.Tifrunner.gnm1.ann1.97QIN4 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.4e-37 159.8 250 38.4
VMungo1309G2027 Vigna mungo HOM05D007822 ORTHO05D009360 4.1e-35 152.9 213 39.9
Rhsim09G0189100 Rhododendron simsii HOM05D007822 ORTHO05D009360 9.1e-35 151.8 300 34.3
Medtr6g034615 Medicago truncatula HOM05D007822 ORTHO05D009360 4.5e-34 149.4 169 43.8
arahy.Tifrunner.gnm1.ann1.IQQ1WH Arachis hypogaea HOM05D007822 ORTHO05D009360 7.7e-34 148.7 195 42.6
arahy.Tifrunner.gnm1.ann1.SE6DU5 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.3e-33 147.1 214 39.3
Oeu042537.1 Olea europaea HOM05D007822 ORTHO05D009360 1.9e-32 144.1 283 30.7
arahy.Tifrunner.gnm1.ann1.GB1I3E Arachis hypogaea HOM05D007822 ORTHO05D009360 3.3e-32 143.3 197 41.1
Sc09g0001460 Simmondsia chinensis HOM05D007822 ORTHO05D009360 2.8e-31 140.2 324 32.1
arahy.Tifrunner.gnm1.ann1.UHL69B Arachis hypogaea HOM05D007822 ORTHO05D009360 3.6e-31 139.8 250 35.6
Sc09g0001470 Simmondsia chinensis HOM05D007822 ORTHO05D009360 4.4e-29 132.9 327 30.6
TPR.G19772 Trifolium pratense HOM05D007822 ORTHO05D009360 7.0e-27 125.6 157 40.8
Rhsim09G0015300 Rhododendron simsii HOM05D007822 ORTHO05D009360 9.2e-27 125.2 301 32.2
arahy.Tifrunner.gnm1.ann1.UXA4FW Arachis hypogaea HOM05D007822 ORTHO05D009360 1.3e-25 121.3 287 32.4
TPR.G11880 Trifolium pratense HOM05D000005 ORTHO05D009360 4.3e-24 116.3 173 38.7
DCAR_014640 Daucus carota HOM05D007822 ORTHO05D009360 3.1e-22 110.2 173 37.0
Medtr6g060160 Medicago truncatula HOM05D007822 ORTHO05D009360 2.0e-21 107.5 132 43.2
arahy.Tifrunner.gnm1.ann1.LY7S5B Arachis hypogaea HOM05D007822 ORTHO05D009360 1.1e-19 101.7 223 31.4
RhsimUnG0026200 Rhododendron simsii HOM05D007822 ORTHO05D009360 4.1e-19 99.8 162 34.0
TPR.G33966 Trifolium pratense HOM05D007822 ORTHO05D009360 9.2e-19 98.6 90 50.0
arahy.Tifrunner.gnm1.ann1.JV62Q3 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.3e-16 90.1 93 45.2
Lalb_Chr23g0273131 Lupinus albus HOM05D007822 ORTHO05D009360 1.6e-15 87.8 103 46.6
Rhsim10G0180500 Rhododendron simsii HOM05D007822 ORTHO05D009360 2.1e-15 87.4 180 34.4
Psat5g099000 Pisum sativum HOM05D007822 ORTHO05D009360 8.0e-15 85.5 79 50.6
Lalb_Chr23g0273141 Lupinus albus HOM05D007822 ORTHO05D009360 5.2e-14 82.8 101 44.6
TPR.G18088 Trifolium pratense HOM05D007822 ORTHO05D009360 2.6e-13 80.5 82 48.8
Lalb_Chr23g0273151 Lupinus albus HOM05D007822 ORTHO05D009360 4.4e-13 79.7 65 55.4
TPR.G19764 Trifolium pratense HOM05D007822 ORTHO05D009360 2.1e-10 70.9 82 45.1
TPR.G24719 Trifolium pratense HOM05D007822 ORTHO05D009360 3.0e-09 67.0 90 43.3
Medtr3g084700 Medicago truncatula HOM05D007822 ORTHO05D009360 3.9e-09 66.6 84 47.6
TPR.G5267 Trifolium pratense HOM05D007822 ORTHO05D009360 8.6e-09 65.5 91 41.8
Medtr8g080950 Medicago truncatula HOM05D007822 ORTHO05D009360 1.5e-08 64.7 170 27.1
Medtr6g034605 Medicago truncatula HOM05D007822 ORTHO05D009360 1.9e-08 64.3 96 36.5
Medtr8g063930 Medicago truncatula HOM05D003615 ORTHO05D004858 4.3e-08 63.2 97 40.2
Medtr3g084660 Medicago truncatula HOM05D007822 ORTHO05D009360 1.6e-07 61.2 100 39.0
GSVIVG01018983001 Vitis vinifera HOM05D002420 ORTHO05D002422 5.2e-06 56.2 133 29.3
Actinidia08199 Actinidia chinensis HOM05D007822 ORTHO05D009360 6.8e-06 55.8 61 39.3
QL06p045688 Quercus lobata HOM05D002420 ORTHO05D002422 6.8e-06 55.8 231 26.4
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 8.9e-06 55.5 179 27.9


User provided reference genes

Program Settings