Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 4.6e-283 977.2 503 100.0
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.4e-247 858.6 489 92.6
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 1.3e-229 799.7 488 86.3
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 6.4e-224 780.8 485 83.7
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 2.5e-196 689.1 494 73.7
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 2.4e-194 682.6 485 74.8
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 1.1e-191 673.7 491 74.1
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 4.8e-187 658.3 477 73.2
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 1.4e-167 593.6 474 65.2
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 1.4e-167 593.6 485 64.9
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 6.0e-166 588.2 477 65.0
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 8.2e-163 577.8 494 63.0
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 2.0e-137 493.4 470 57.2
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 5.9e-137 491.9 470 56.6
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 1.1e-135 487.6 349 73.4
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 3.2e-135 486.1 479 56.4
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 5.5e-135 485.3 477 55.1
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 8.0e-134 481.5 470 56.0
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 8.0e-134 481.5 470 56.0
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.4e-133 480.7 470 56.0
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 4.0e-133 479.2 482 54.8
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 1.3e-131 474.2 476 54.6
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 2.2e-131 473.4 498 52.2
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 3.5e-129 466.1 463 55.1
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 5.9e-129 465.3 477 53.9
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.0e-128 464.5 470 54.7
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 5.5e-127 458.8 484 51.0
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 9.4e-127 458.0 484 50.2
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 1.6e-126 457.2 488 52.3
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 1.8e-125 453.8 470 53.2
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 1.8e-125 453.8 511 50.5
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 1.8e-125 453.8 466 53.2
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 5.2e-125 452.2 488 51.8
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 6.3e-123 445.3 484 50.2
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 1.8e-122 443.7 482 50.6
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 4.1e-122 442.6 484 49.8
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 7.7e-121 438.3 476 51.7
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 1.0e-120 438.0 469 52.0
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 4.0e-117 426.0 587 44.8
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.2e-116 424.5 476 48.7
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 6.3e-115 418.7 313 71.9
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 2.4e-114 416.8 469 49.0
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 3.1e-114 416.4 469 50.1
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 4.1e-114 416.0 471 48.6
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 5.4e-114 415.6 514 47.9
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 9.2e-114 414.8 467 49.0
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 2.7e-113 413.3 486 47.7
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 4.5e-113 412.5 480 48.8
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 7.8e-113 411.8 470 49.6
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 5.0e-112 409.1 491 47.0
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 6.6e-112 408.7 500 47.0
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 1.5e-111 407.5 499 46.7
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 1.5e-111 407.5 476 48.5
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 1.5e-111 407.5 497 46.9
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.5e-111 406.8 494 47.4
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 7.3e-111 405.2 487 47.4
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 7.3e-111 405.2 487 47.4
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 9.5e-111 404.8 481 46.4
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 2.8e-110 403.3 469 49.7
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 2.8e-110 403.3 485 47.6
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 8.0e-110 401.7 466 47.4
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 8.0e-110 401.7 471 48.6
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 1.4e-109 401.0 479 47.8
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 1.8e-109 400.6 465 48.0
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 4.0e-109 399.4 467 49.7
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 5.2e-109 399.1 481 45.9
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 6.8e-109 398.7 467 48.4
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 7.5e-108 395.2 469 47.3
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 5.4e-106 389.0 490 47.1
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 4.6e-105 386.0 491 48.3
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 5.0e-104 382.5 472 46.2
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 6.6e-104 382.1 478 47.3
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.9e-103 380.6 474 47.5
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 8.0e-102 375.2 474 47.0
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 3.4e-100 369.8 464 48.5
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 2.9e-99 366.7 479 45.5
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 1.4e-98 364.4 511 43.2
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 5.4e-98 362.5 466 43.1
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 2.7e-97 360.1 469 43.1
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 4.3e-95 352.8 394 52.5
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 2.4e-90 337.0 368 50.5
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 8.9e-85 318.5 480 40.6
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 9.9e-84 315.1 395 46.3
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 5.4e-82 309.3 339 51.3
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 3.9e-80 303.1 356 49.7
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.5e-76 291.2 349 47.0
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 7.6e-76 288.9 407 43.0
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 1.3e-75 288.1 401 44.1
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 2.7e-73 280.4 320 48.4
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 2.7e-73 280.4 340 45.9
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 1.3e-72 278.1 493 36.3
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 1.9e-71 274.2 429 39.4
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 5.3e-69 266.2 444 40.3
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.4e-66 258.1 339 43.7
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 1.6e-65 254.6 309 46.9
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 7.4e-63 245.7 338 43.8
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 9.0e-53 212.2 249 47.4
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.7e-51 208.0 233 55.8
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.3e-46 191.8 253 45.1
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 5.9e-44 183.0 457 30.4
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 3.9e-40 170.2 192 48.4
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 1.5e-39 168.3 130 68.5
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 1.4e-37 161.8 218 41.3
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 1.5e-31 141.7 499 25.9
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.6e-31 141.0 128 56.2
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 5.3e-29 133.3 131 52.7
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 3.0e-24 117.5 107 61.7
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 9.1e-21 105.9 122 48.4
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 2.5e-10 71.2 66 48.5
SHI01042 Sapria himalayana HOM05D005651 ORTHO05D006877 4.0e-08 63.9 59 54.2


User provided reference genes

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