Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G051600 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.9e-204 714.1 337 100.0
Phvul.006G052100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.0e-185 651.7 347 89.6
Phvul.003G159000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.0e-182 641.3 347 87.6
Phvul.001G265100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.0e-181 639.0 348 87.6
Phvul.004G062200 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.5e-181 637.9 347 88.5
Phvul.004G062300 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.8e-175 618.6 336 87.2
Phvul.002G276000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 9.0e-174 613.6 347 84.1
Phvul.001G264800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.1e-168 596.7 342 84.5
Phvul.001G264900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.1e-162 575.9 349 81.9
Phvul.006G051800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 5.0e-148 528.1 319 81.5
Phvul.006G051900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.6e-133 479.2 240 93.3
Glyma.16G161700 Glycine max HOM05D007822 ORTHO05D009360 1.3e-103 380.6 353 56.4
Glyma.15G092300 Glycine max HOM05D007822 ORTHO05D009360 8.9e-89 331.3 357 50.1
TPR.G18087 Trifolium pratense HOM05D007822 ORTHO05D009360 6.2e-82 308.5 353 45.0
Medtr3g084690 Medicago truncatula HOM05D007822 ORTHO05D009360 8.1e-82 308.1 352 45.5
Medtr1g016400 Medicago truncatula HOM05D007822 ORTHO05D009360 1.7e-79 300.4 344 46.5
Medtr1g017120 Medicago truncatula HOM05D007822 ORTHO05D009360 3.8e-79 299.3 344 46.2
Ca_08383_v3 Cicer arietinum L. HOM05D007822 ORTHO05D009360 9.3e-78 294.7 347 46.4
TPR.G19769 Trifolium pratense HOM05D007822 ORTHO05D009360 9.3e-78 294.7 323 46.1
Dinv16858 Davidia involucrata HOM05D007822 ORTHO05D009360 2.3e-76 290.0 348 43.1
TPR.G18082 Trifolium pratense HOM05D007822 ORTHO05D009360 3.0e-76 289.7 357 42.6
arahy.Tifrunner.gnm1.ann1.A760R9 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.8e-73 280.4 357 44.5
Lalb_Chr23g0273121 Lupinus albus HOM05D007822 ORTHO05D009360 3.5e-69 266.2 227 53.3
Glyma.03G020200 Glycine max HOM05D007822 ORTHO05D009360 2.3e-68 263.5 353 43.1
VMungo1215G0886 Vigna mungo HOM05D007822 ORTHO05D009360 1.1e-67 261.2 357 41.2
TPR.G33992 Trifolium pratense HOM05D007822 ORTHO05D009360 1.3e-66 257.7 346 40.5
TPR.G34642 Trifolium pratense HOM05D007822 ORTHO05D009360 1.6e-66 257.3 359 41.5
Medtr2g450270 Medicago truncatula HOM05D007822 ORTHO05D009360 6.2e-66 255.4 336 41.1
arahy.Tifrunner.gnm1.ann1.HWH8LL Arachis hypogaea HOM05D007822 ORTHO05D009360 1.3e-63 247.7 357 41.7
arahy.Tifrunner.gnm1.ann1.6X56G5 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.2e-63 246.9 333 42.6
Psat2g094240 Pisum sativum HOM05D007822 ORTHO05D009360 2.9e-63 246.5 226 51.8
arahy.Tifrunner.gnm1.ann1.Z44N3D Arachis hypogaea HOM05D007822 ORTHO05D009360 1.4e-62 244.2 353 41.4
Lalb_Chr07g0186991 Lupinus albus HOM05D007822 ORTHO05D009360 2.1e-61 240.4 352 41.5
arahy.Tifrunner.gnm1.ann1.JJB16R Arachis hypogaea HOM05D007822 ORTHO05D009360 6.0e-61 238.8 347 41.5
Prupe.2G273800 Prunus persica HOM05D007822 ORTHO05D009360 8.7e-60 235.0 369 38.2
arahy.Tifrunner.gnm1.ann1.2QW5CK Arachis hypogaea HOM05D007822 ORTHO05D009360 1.9e-59 233.8 357 40.6
arahy.Tifrunner.gnm1.ann1.N9Y9CH Arachis hypogaea HOM05D007822 ORTHO05D009360 4.8e-58 229.2 355 39.7
arahy.Tifrunner.gnm1.ann1.00A0K2 Arachis hypogaea HOM05D007822 ORTHO05D009360 6.2e-58 228.8 320 41.9
arahy.Tifrunner.gnm1.ann1.30JHYY Arachis hypogaea HOM05D007822 ORTHO05D009360 4.9e-55 219.2 353 38.2
TPR.G34648 Trifolium pratense HOM05D007822 ORTHO05D009360 5.5e-54 215.7 278 43.5
arahy.Tifrunner.gnm1.ann1.SE6DU5 Arachis hypogaea HOM05D007822 ORTHO05D009360 7.1e-54 215.3 238 45.4
Rhsim01G0262200 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.2e-53 214.5 353 35.4
Oeu042537.1 Olea europaea HOM05D007822 ORTHO05D009360 2.3e-52 210.3 294 37.4
arahy.Tifrunner.gnm1.ann1.GB1I3E Arachis hypogaea HOM05D007822 ORTHO05D009360 5.1e-52 209.1 338 36.7
arahy.Tifrunner.gnm1.ann1.B28JH2 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.1e-50 203.8 299 40.1
Rhsim09G0189100 Rhododendron simsii HOM05D007822 ORTHO05D009360 5.9e-48 195.7 357 34.7
arahy.Tifrunner.gnm1.ann1.97QIN4 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.6e-45 187.6 241 41.9
arahy.Tifrunner.gnm1.ann1.IQQ1WH Arachis hypogaea HOM05D007822 ORTHO05D009360 1.0e-44 184.9 200 48.0
Sc09g0001470 Simmondsia chinensis HOM05D007822 ORTHO05D009360 4.3e-43 179.5 370 33.2
Medtr6g034615 Medicago truncatula HOM05D007822 ORTHO05D009360 4.8e-42 176.0 170 48.8
arahy.Tifrunner.gnm1.ann1.UHL69B Arachis hypogaea HOM05D007822 ORTHO05D009360 5.9e-40 169.1 245 40.0
Sc09g0001460 Simmondsia chinensis HOM05D007822 ORTHO05D009360 3.8e-39 166.4 360 33.1
Rhsim09G0015300 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.9e-38 164.1 360 33.9
TPR.G19772 Trifolium pratense HOM05D007822 ORTHO05D009360 2.1e-37 160.6 195 40.0
VMungo1309G2027 Vigna mungo HOM05D007822 ORTHO05D009360 6.1e-37 159.1 241 37.8
TPR.G33966 Trifolium pratense HOM05D007822 ORTHO05D009360 6.7e-36 155.6 127 51.2
arahy.Tifrunner.gnm1.ann1.UXA4FW Arachis hypogaea HOM05D007822 ORTHO05D009360 1.7e-34 151.0 288 35.4
TPR.G11880 Trifolium pratense HOM05D000005 ORTHO05D009360 4.1e-33 146.4 173 42.8
DCAR_014640 Daucus carota HOM05D007822 ORTHO05D009360 6.9e-33 145.6 204 40.2
RhsimUnG0026200 Rhododendron simsii HOM05D007822 ORTHO05D009360 2.3e-28 130.6 189 37.0
Psat5g099000 Pisum sativum HOM05D007822 ORTHO05D009360 5.1e-28 129.4 125 47.2
Lalb_Chr23g0273131 Lupinus albus HOM05D007822 ORTHO05D009360 1.6e-24 117.9 103 54.4
Lalb_Chr23g0273141 Lupinus albus HOM05D007822 ORTHO05D009360 1.7e-23 114.4 101 53.5
arahy.Tifrunner.gnm1.ann1.JV62Q3 Arachis hypogaea HOM05D007822 ORTHO05D009360 8.5e-23 112.1 130 43.8
TPR.G18088 Trifolium pratense HOM05D007822 ORTHO05D009360 6.1e-21 105.9 92 52.2
Medtr6g060160 Medicago truncatula HOM05D007822 ORTHO05D009360 1.8e-20 104.4 146 38.4
TPR.G8151 Trifolium pratense HOM05D007822 ORTHO05D009360 2.4e-17 94.0 154 37.0
Lalb_Chr23g0273151 Lupinus albus HOM05D007822 ORTHO05D009360 7.0e-17 92.4 78 53.8
Medtr6g034605 Medicago truncatula HOM05D007822 ORTHO05D009360 5.9e-16 89.4 107 41.1
Rhsim10G0180500 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.4e-12 78.2 185 31.9
arahy.Tifrunner.gnm1.ann1.WW5NKJ Arachis hypogaea HOM05D007822 ORTHO05D009360 3.0e-12 77.0 73 50.7
TPR.G5267 Trifolium pratense HOM05D007822 ORTHO05D009360 1.5e-11 74.7 63 54.0
Sc01g0006370 Simmondsia chinensis HOM05D022095 ORTHO05D009360 3.1e-09 67.0 100 32.0
Sc19g0005840 Simmondsia chinensis HOM05D022095 ORTHO05D009360 4.1e-09 66.6 192 28.6
Medtr8g080950 Medicago truncatula HOM05D007822 ORTHO05D009360 5.4e-09 66.2 181 24.9
TPR.G24719 Trifolium pratense HOM05D007822 ORTHO05D009360 2.9e-07 60.5 97 40.2
Sc06g0004600 Simmondsia chinensis HOM05D022095 ORTHO05D009360 3.8e-07 60.1 139 30.9
Actinidia08199 Actinidia chinensis HOM05D007822 ORTHO05D009360 6.5e-07 59.3 61 41.0
TPR.G19764 Trifolium pratense HOM05D007822 ORTHO05D009360 2.5e-06 57.4 89 38.2
Medtr3g070037 Medicago truncatula HOM05D007822 ORTHO05D009360 4.2e-06 56.6 49 53.1


User provided reference genes

Program Settings