Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.9e-260 902.1 497 100.0
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.5e-230 802.7 497 90.5
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 9.1e-223 776.9 497 84.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 3.8e-221 771.5 497 83.5
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 4.0e-202 708.4 498 76.5
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 8.3e-200 700.7 497 74.8
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 7.0e-199 697.6 497 75.7
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.2e-198 696.8 497 79.7
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 2.7e-198 695.7 497 75.5
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 2.5e-196 689.1 498 74.5
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 4.5e-190 668.3 497 72.6
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 3.8e-189 665.2 498 73.3
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.1e-180 637.1 498 73.3
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 2.3e-178 629.4 499 67.7
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 5.2e-178 628.2 501 70.3
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 2.0e-169 599.7 496 66.5
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 2.6e-169 599.4 499 64.7
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 8.3e-168 594.3 496 64.5
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 3.2e-167 592.4 500 64.0
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.2e-166 590.5 501 65.7
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 6.0e-166 588.2 503 64.8
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.7e-165 586.6 502 66.5
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 6.6e-165 584.7 496 67.7
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 8.6e-165 584.3 501 67.9
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.9e-164 583.2 511 64.4
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 3.3e-164 582.4 501 67.5
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.2e-163 580.5 496 63.9
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 3.6e-163 578.9 499 64.3
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 8.1e-163 577.8 500 67.4
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 4.0e-162 575.5 502 68.1
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 5.2e-162 575.1 501 66.9
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.5e-161 573.5 506 65.6
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 2.0e-161 573.2 502 64.5
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 7.6e-161 571.2 505 65.3
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 2.2e-160 569.7 503 66.4
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 2.9e-160 569.3 497 63.2
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.7e-160 568.9 499 63.9
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.7e-160 568.9 499 63.9
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 8.4e-160 567.8 498 61.8
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 2.4e-159 566.2 499 63.5
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 3.2e-159 565.8 497 63.2
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 7.1e-159 564.7 498 62.7
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.6e-158 563.5 503 62.0
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 2.1e-158 563.1 498 63.3
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.3e-157 560.5 498 61.2
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.7e-157 560.1 496 62.7
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 9.6e-156 554.3 522 63.8
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.6e-155 553.5 515 60.8
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 1.6e-155 553.5 496 65.5
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.7e-152 543.5 499 61.5
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 3.8e-152 542.3 525 59.0
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 1.4e-151 540.4 517 62.3
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.2e-151 539.3 499 66.1
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 5.4e-151 538.5 498 62.0
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 7.1e-151 538.1 505 58.8
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.6e-150 537.0 518 63.9
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 1.0e-149 534.3 501 58.3
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.5e-148 529.6 490 61.2
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 2.5e-148 529.6 498 58.2
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 3.3e-148 529.3 551 55.5
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 3.3e-148 529.3 516 61.8
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.6e-147 526.9 519 57.0
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 3.6e-147 525.8 509 60.7
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 8.1e-147 524.6 494 57.7
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 2.0e-145 520.0 513 61.0
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.1e-143 514.2 507 57.4
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.2e-142 510.8 514 56.0
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 1.3e-141 507.3 513 55.6
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.5e-140 503.1 511 53.6
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.3e-139 500.7 511 56.4
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 1.6e-139 500.4 516 55.6
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 6.2e-139 498.4 496 61.9
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 8.1e-139 498.0 510 54.9
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 4.0e-138 495.7 508 58.9
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 2.0e-137 493.4 508 55.7
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 4.5e-137 492.3 517 57.1
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 5.8e-137 491.9 511 55.8
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 1.4e-135 487.3 504 56.0
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.4e-135 487.3 507 55.4
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.9e-135 486.9 511 58.7
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.4e-135 486.5 525 54.1
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 9.3e-135 484.6 514 56.0
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 4.6e-134 482.3 545 53.2
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.3e-133 480.7 512 56.1
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.3e-132 476.1 508 55.5
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.8e-130 470.3 511 56.4
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 3.1e-130 469.5 511 56.2
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 5.3e-130 468.8 495 59.2
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 2.5e-124 449.9 500 55.0
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 3.3e-124 449.5 514 54.1
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.6e-121 439.9 346 64.7
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 5.9e-121 438.7 406 57.9
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.3e-120 437.6 364 70.3
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 3.3e-116 422.9 496 52.4
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 2.0e-108 397.1 359 62.4
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 4.8e-99 365.9 515 43.1
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.1e-98 364.8 519 44.3
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 8.5e-96 355.1 333 60.7
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 8.2e-91 338.6 505 43.2
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 2.8e-83 313.5 354 57.9
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.5e-79 301.2 581 37.9
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 4.4e-68 263.1 189 69.3
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 7.5e-60 235.7 358 43.6
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.5e-52 211.5 561 32.3
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 4.3e-39 166.8 192 57.3
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 2.2e-35 154.5 146 57.5
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 5.8e-28 129.8 325 34.2
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.2e-25 122.1 106 60.4
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 7.6e-20 102.8 148 42.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.0e-16 92.4 324 30.2
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.2e-06 58.2 53 49.1
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 6.3e-06 56.6 83 37.3
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 8.2e-06 56.2 78 41.0


User provided reference genes

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