Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 5.0e-54 214.5 101 100.0
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 9.2e-32 140.6 97 69.1
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 1.7e-30 136.3 79 74.7
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 8.1e-20 100.9 96 56.2
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 1.2e-18 97.1 83 53.0
Lalb_Chr15g0081481 Lupinus albus HOM05D008051 ORTHO05D009905 1.2e-18 97.1 94 52.1
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 1.7e-17 93.2 97 49.5
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 2.9e-17 92.4 104 48.1
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 3.8e-17 92.0 93 49.5
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 8.4e-17 90.9 104 48.1
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 1.1e-16 90.5 109 45.0
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 1.1e-16 90.5 99 47.5
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 3.2e-16 89.0 104 48.1
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 4.2e-16 88.6 95 44.2
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 9.3e-16 87.4 95 45.3
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 2.1e-15 86.3 94 42.6
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 2.1e-15 86.3 100 47.0
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 2.1e-15 86.3 95 42.1
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 2.7e-15 85.9 93 47.3
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 2.7e-15 85.9 104 43.3
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 4.6e-15 85.1 104 44.2
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 6.0e-15 84.7 46 63.0
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 6.0e-15 84.7 97 43.3
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 1.0e-14 84.0 101 41.6
MSTRG.4127 Avicennia marina HOM05D008051 ORTHO05D009905 2.3e-14 82.8 105 46.7
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 5.1e-14 81.6 78 47.4
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 5.1e-14 81.6 101 42.6
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 5.1e-14 81.6 101 44.6
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 1.1e-13 80.5 68 51.5
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 1.1e-13 80.5 103 44.7
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 1.1e-13 80.5 62 64.5
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 1.1e-13 80.5 49 65.3
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 3.3e-13 79.0 103 43.7
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 4.3e-13 78.6 96 46.9
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 5.6e-13 78.2 72 51.4
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 5.6e-13 78.2 49 65.3
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 9.6e-13 77.4 100 43.0
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 9.6e-13 77.4 105 40.0
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 9.6e-13 77.4 105 40.0
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 1.3e-12 77.0 86 47.7
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 1.3e-12 77.0 103 43.7
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 1.6e-12 76.6 105 40.0
Phvul.008G269500 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 1.6e-12 76.6 97 40.2
ATR0752G075 Amborella trichopoda HOM05D008051 ORTHO05D009905 2.1e-12 76.3 65 49.2
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 2.8e-12 75.9 99 40.4
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 4.8e-12 75.1 101 44.6
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 6.2e-12 74.7 49 65.3
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 8.1e-12 74.3 103 42.7
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 1.1e-11 73.9 96 40.6
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 3.1e-11 72.4 94 39.4
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 3.1e-11 72.4 49 57.1
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 4.0e-11 72.0 100 40.0
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 6.9e-11 71.2 93 40.9
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 9.0e-11 70.9 98 42.9
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 1.5e-10 70.1 67 53.7
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 2.0e-10 69.7 88 39.8
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 2.6e-10 69.3 96 41.7
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 2.6e-10 69.3 101 40.6
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 2.6e-10 69.3 97 44.3
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 2.6e-10 69.3 105 37.1
Nn7g36860 Nelumbo nucifera HOM05D008051 ORTHO05D009905 4.4e-10 68.6 86 41.9
THA.LOC104798770 Tarenaya hassleriana HOM05D012777 ORTHO05D009905 4.4e-10 68.6 100 37.0
TPR.G1175 Trifolium pratense HOM05D008051 ORTHO05D009905 1.3e-09 67.0 47 59.6
Lalb_Chr17g0348611 Lupinus albus HOM05D008051 ORTHO05D009905 1.7e-09 66.6 96 38.5
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 2.2e-09 66.2 66 51.5
MD11G1211300 Malus domestica HOM05D008051 ORTHO05D009905 1.4e-08 63.5 111 38.7
Manes.15G067600 Manihot esculenta HOM05D008051 ORTHO05D009905 3.2e-08 62.4 122 32.0
Nn1g07253 Nelumbo nucifera HOM05D008051 ORTHO05D009905 4.2e-08 62.0 86 40.7
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 7.1e-08 61.2 102 36.3
Medtr8g442580 Medicago truncatula HOM05D008051 ORTHO05D009905 9.3e-08 60.8 49 53.1
Medtr5g093340 Medicago truncatula HOM05D008051 ORTHO05D009905 2.7e-07 59.3 86 36.0
Medtr5g093370 Medicago truncatula HOM05D008051 ORTHO05D009905 3.5e-07 58.9 90 34.4
Glyma.09G006100 Glycine max HOM05D002014 ORTHO05D001958 4.6e-07 58.5 115 39.1
FAN21G0073 Fragaria x ananassa HOM05D002014 ORTHO05D001958 2.3e-06 56.2 43 48.8
FvH4_3g01670 Fragaria vesca HOM05D002014 ORTHO05D001958 5.1e-06 55.1 43 48.8
EL10Ac8g20103 Beta vulgaris HOM05D002014 ORTHO05D001958 6.6e-06 54.7 76 42.1
EL10Ac8g20104 Beta vulgaris HOM05D002014 ORTHO05D001958 6.6e-06 54.7 76 42.1
FAN25G1699 Fragaria x ananassa HOM05D002014 ORTHO05D001958 6.6e-06 54.7 43 48.8


User provided reference genes

Program Settings