Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G045900 Phaseolus vulgaris HOM05D006998 ORTHO05D008733 1.0e-72 276.6 135 100.0
Glyma.08G318800 Glycine max HOM05D006998 ORTHO05D008733 8.0e-65 250.4 135 90.4
TPR.G33763 Trifolium pratense HOM05D006998 ORTHO05D008733 1.7e-62 242.7 135 88.1
Medtr3g052740 Medicago truncatula HOM05D006998 ORTHO05D008733 8.3e-62 240.4 135 86.7
Lj6g0003593 Lotus japonicus HOM05D006998 ORTHO05D008733 1.4e-61 239.6 135 87.4
Ca_14748_v3 Cicer arietinum L. HOM05D006998 ORTHO05D008733 4.1e-61 238.0 135 86.7
TPR.G39742 Trifolium pratense HOM05D006998 ORTHO05D008733 5.4e-61 237.7 132 87.1
Lalb_Chr20g0116091 Lupinus albus HOM05D006998 ORTHO05D008733 3.0e-59 231.9 135 84.4
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea HOM05D006998 ORTHO05D008733 5.6e-58 227.6 135 82.2
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea HOM05D006998 ORTHO05D008733 8.0e-57 223.8 135 81.5
Potri.001G336600 Populus trichocarpa HOM05D006998 ORTHO05D008733 3.7e-54 214.9 132 78.8
Sabra16G0217400 Salix brachista HOM05D006998 ORTHO05D008733 8.3e-54 213.8 132 78.0
Ciclev10017134m.g Citrus clementina HOM05D006998 ORTHO05D008733 1.4e-53 213.0 132 78.8
QL02p001451 Quercus lobata HOM05D006998 ORTHO05D008733 1.9e-53 212.6 132 79.5
CiPaw.13G047700 Carya illinoinensis HOM05D006998 ORTHO05D008733 2.4e-53 212.2 132 80.3
PSO782G5351 Papaver somniferum HOM05D006998 ORTHO05D008733 7.0e-53 210.7 135 76.3
MD09G1018100 Malus domestica HOM05D006998 ORTHO05D008733 1.6e-52 209.5 133 78.9
GSVIVG01003966001 Vitis vinifera HOM05D006998 ORTHO05D008733 1.6e-52 209.5 121 81.8
Atru.chr6.2476 Acer truncatum HOM05D006998 ORTHO05D008733 2.7e-52 208.8 132 78.0
HanXRQChr09g0255661 Helianthus annuus HOM05D006998 ORTHO05D008733 7.8e-52 207.2 128 75.8
Cpa.g.sc130.46 Carica papaya HOM05D006998 ORTHO05D008733 1.0e-51 206.8 135 75.6
MELO3C014841.2 Cucumis melo HOM05D006998 ORTHO05D008733 1.3e-51 206.5 119 80.7
Manes.15G155800 Manihot esculenta HOM05D006998 ORTHO05D008733 1.3e-51 206.5 132 75.8
COL.COLO4_29269 Corchorus olitorius HOM05D006998 ORTHO05D008733 1.7e-51 206.1 135 77.8
SGA_v2.0_scaffold135G34933 Striga asiatica HOM05D006998 ORTHO05D008733 2.3e-51 205.7 133 76.7
Duzib147G0953 Durio zibethinus HOM05D006998 ORTHO05D008733 3.0e-51 205.3 135 76.3
ECA232G0345 Erigeron canadensis HOM05D006998 ORTHO05D008733 3.0e-51 205.3 130 76.2
FAN14G5586 Fragaria x ananassa HOM05D006998 ORTHO05D008733 3.0e-51 205.3 132 78.8
TWI56G1021 Tripterygium wilfordii HOM05D006998 ORTHO05D008733 5.0e-51 204.5 132 77.3
TAR371G1002 Trochodendron aralioides HOM05D006998 ORTHO05D008733 6.6e-51 204.1 122 78.7
Gohir.A07G225400 Gossypium hirsutum HOM05D006998 ORTHO05D008733 1.1e-50 203.4 134 76.1
Gohir.D07G232600 Gossypium hirsutum HOM05D006998 ORTHO05D008733 1.1e-50 203.4 134 75.4
Gorai.001G267900 Gossypium raimondii HOM05D006998 ORTHO05D008733 1.1e-50 203.4 134 75.4
Sed0003364 Sechium edule HOM05D006998 ORTHO05D008733 1.1e-50 203.4 132 74.2
MSTRG.3117 Avicennia marina HOM05D006998 ORTHO05D008733 1.5e-50 203.0 134 73.9
SalBow2G2409 Salvia bowleyana HOM05D006998 ORTHO05D008733 1.5e-50 203.0 133 76.7
Eucgr.I01699 Eucalyptus grandis HOM05D006998 ORTHO05D008733 1.9e-50 202.6 119 79.8
Zm00001eb144320 Zea mays HOM05D006998 ORTHO05D008733 2.5e-50 202.2 131 72.5
Solyc02g093730.4 Solanum lycopersicum HOM05D006998 ORTHO05D008733 4.3e-50 201.4 122 77.9
PGSC0003DMG400012647 Solanum tuberosum HOM05D006998 ORTHO05D008733 5.6e-50 201.1 124 77.4
Thecc.04G025300 Theobroma cacao HOM05D006998 ORTHO05D008733 9.5e-50 200.3 135 75.6
RcHm_v2.0_Chr2g0174071 Rosa chinensis HOM05D006998 ORTHO05D008733 1.2e-49 199.9 132 75.8
Aqoxy1G01464 Aquilegia oxysepala HOM05D006998 ORTHO05D008733 2.1e-49 199.1 122 74.6
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 3.6e-49 198.4 133 73.7
AUR62015328 Chenopodium quinoa HOM05D006998 ORTHO05D008733 3.6e-49 198.4 130 74.6
Actinidia18425 Actinidia chinensis HOM05D006998 ORTHO05D008733 8.1e-49 197.2 132 72.7
Lsat_1_v5_gn_4_184841 Lactuca sativa HOM05D006998 ORTHO05D008733 8.1e-49 197.2 134 71.6
CANSAT64G0830 Cannabis sativa HOM05D006998 ORTHO05D008733 1.1e-48 196.8 122 77.0
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea HOM05D006998 ORTHO05D008733 1.8e-48 196.1 132 73.5
Sc03g0006900 Simmondsia chinensis HOM05D006998 ORTHO05D008733 2.3e-48 195.7 132 72.0
vmacro18311 Vaccinium macrocarpon HOM05D006998 ORTHO05D008733 2.3e-48 195.7 141 68.8
CDE04G0536 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 6.8e-48 194.1 130 72.3
EL10Ac3g06878 Beta vulgaris HOM05D006998 ORTHO05D008733 8.9e-48 193.7 125 74.4
Cc07_g00360 Coffea canephora HOM05D006998 ORTHO05D008733 1.2e-47 193.4 129 72.1
MBI06_g05240_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 1.5e-47 193.0 124 75.0
Sc03g0007000 Simmondsia chinensis HOM05D006998 ORTHO05D008733 3.4e-47 191.8 132 71.2
ATR1089G022 Amborella trichopoda HOM05D006998 ORTHO05D008733 1.3e-46 189.9 127 71.7
A06p41260 Brassica napus HOM05D006998 ORTHO05D008733 1.3e-46 189.9 114 77.2
BraA06t27050Z Brassica rapa HOM05D006998 ORTHO05D008733 1.3e-46 189.9 114 77.2
ClCG05G013170 Citrullus lanatus HOM05D006998 ORTHO05D008733 1.3e-46 189.9 107 84.1
CAN.G473.52 Capsicum annuum HOM05D006998 ORTHO05D008733 3.7e-46 188.3 125 74.4
CsaV3_3G027380 Cucumis sativus L. HOM05D006998 ORTHO05D008733 3.7e-46 188.3 107 83.2
Migut.H00050 Erythranthe guttata HOM05D006998 ORTHO05D008733 4.9e-46 188.0 109 81.7
PSO063G6009 Papaver somniferum HOM05D006998 ORTHO05D008733 4.9e-46 188.0 155 61.9
C07p36390 Brassica napus HOM05D006998 ORTHO05D008733 1.1e-45 186.8 118 73.7
Peaxi162Scf00080g01715 Petunia axillaris HOM05D006998 ORTHO05D008733 1.9e-45 186.0 107 80.4
THA.LOC104823962 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 1.9e-45 186.0 133 68.4
THA.LOC104823963 Tarenaya hassleriana HOM05D006998 ORTHO05D008733 1.9e-45 186.0 133 68.4
MBI06_g43854_MAGBIO Magnolia biondii HOM05D006998 ORTHO05D008733 2.4e-45 185.7 109 78.9
Nitab4.5_0000040g0550 Nicotiana tabacum HOM05D006998 ORTHO05D008733 4.1e-45 184.9 107 81.3
BcaC06g31012 Brassica carinata HOM05D006998 ORTHO05D008733 7.1e-45 184.1 114 74.6
FAN05G2331 Fragaria x ananassa HOM05D006998 ORTHO05D008733 7.1e-45 184.1 114 79.8
Nitab4.5_0005414g0020 Nicotiana tabacum HOM05D006998 ORTHO05D008733 7.1e-45 184.1 107 79.4
Carub.0005s0564 Capsella rubella HOM05D006998 ORTHO05D008733 1.2e-44 183.3 114 73.7
AL5G16660 Arabidopsis lyrata HOM05D006998 ORTHO05D008733 1.6e-44 183.0 115 72.2
Os02g0197800 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 1.6e-44 183.0 119 73.9
BraA02t08541Z Brassica rapa HOM05D006998 ORTHO05D008733 2.1e-44 182.6 118 72.9
BolC7t44158H Brassica oleracea HOM05D006998 ORTHO05D008733 2.7e-44 182.2 118 70.3
Sp2g16530 Schrenkiella parvula HOM05D006998 ORTHO05D008733 2.7e-44 182.2 129 69.0
Aa31LG2G5380 Aethionema arabicum HOM05D006998 ORTHO05D008733 6.0e-44 181.0 126 69.8
SalBow2G0885 Salvia bowleyana HOM05D006998 ORTHO05D008733 6.0e-44 181.0 107 82.2
VMungo0540G0081 Vigna mungo HOM05D006998 ORTHO05D008733 6.0e-44 181.0 96 91.7
A02p35400 Brassica napus HOM05D006998 ORTHO05D008733 1.0e-43 180.3 118 72.0
C02p54110 Brassica napus HOM05D006998 ORTHO05D008733 5.1e-43 177.9 118 70.3
BolC2t11473H Brassica oleracea HOM05D006998 ORTHO05D008733 5.1e-43 177.9 118 70.3
Hund25052 Selenicereus undatus HOM05D006998 ORTHO05D008733 1.9e-42 176.0 132 67.4
HPP92_007225 Vanilla planifolia HOM05D006998 ORTHO05D008733 1.9e-42 176.0 116 73.3
CDE07G0016 Ceratophyllum demersum HOM05D006998 ORTHO05D008733 2.5e-42 175.6 106 79.2
Os01g0904300 Oryza sativa ssp. japonica HOM05D006998 ORTHO05D008733 4.0e-40 168.3 113 69.9
SHI03852 Sapria himalayana HOM05D006998 ORTHO05D008733 2.0e-31 139.4 95 67.4
Psat5g174840 Pisum sativum HOM05D006998 ORTHO05D008733 2.6e-31 139.0 85 80.0
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis HOM05D006998 ORTHO05D008733 5.8e-31 137.9 140 49.3
Dinv25701 Davidia involucrata HOM05D006998 ORTHO05D008733 1.3e-30 136.7 72 87.5
SMO364G0335 Selaginella moellendorffii HOM05D006998 ORTHO05D008733 2.2e-30 136.0 103 59.2
Pp3c11_10230 Physcomitrium patens HOM05D006998 ORTHO05D008733 7.1e-29 131.0 104 58.7
DCAR_011285 Daucus carota HOM05D006998 ORTHO05D008733 6.0e-28 127.9 71 83.1
FAN02G1980 Fragaria x ananassa HOM05D006998 ORTHO05D008733 5.6e-26 121.3 83 77.1
Haze_03392 Corylus avellana HOM05D006998 ORTHO05D008733 1.6e-25 119.8 115 60.0
Haze_03396 Corylus avellana HOM05D006998 ORTHO05D008733 1.6e-25 119.8 115 60.0
unitig_744.g24361 Utricularia gibba HOM05D002252 ORTHO05D002451 2.8e-25 119.0 89 62.9
Cfa010438 Carpinus fangiana HOM05D006998 ORTHO05D008733 3.6e-25 118.6 89 71.9
PGR142G0400 Punica granatum HOM05D006998 ORTHO05D008733 1.2e-23 113.6 87 65.5
COL.COLO4_29265 Corchorus olitorius HOM05D006998 ORTHO05D008733 1.5e-23 113.2 86 70.9
CARHR148660 Cardamine hirsuta HOM05D006998 ORTHO05D008733 7.6e-23 110.9 69 72.5
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 1.3e-22 110.2 98 50.0
Nn5g27086 Nelumbo nucifera HOM05D006998 ORTHO05D008733 1.4e-21 106.7 74 70.3
AT3G27340 Arabidopsis thaliana HOM05D006998 ORTHO05D008733 2.4e-21 105.9 70 68.6
Thhalv10005152m.g Eutrema salsugineum HOM05D006998 ORTHO05D008733 1.2e-20 103.6 69 69.6
Medtr1252s0010 Medicago truncatula HOM05D006998 ORTHO05D008733 1.2e-20 103.6 87 59.8
Sed0022519 Sechium edule HOM05D006998 ORTHO05D008733 2.1e-17 92.8 47 87.2
FvH4_6g52430 Fragaria vesca HOM05D006998 ORTHO05D008733 1.7e-14 83.2 61 72.1
BcaB01g01217 Brassica carinata HOM05D006998 ORTHO05D008733 1.1e-13 80.5 72 58.3
Dinv33390 Davidia involucrata HOM05D006998 ORTHO05D008733 3.2e-13 79.0 54 66.7
Prupe.3G299000 Prunus persica HOM05D000008 ORTHO05D000005 5.5e-13 78.2 61 65.6
Cre09.g413300 Chlamydomonas reinhardtii HOM05D006998 ORTHO05D008733 3.0e-11 72.4 60 50.0
Sed0018714 Sechium edule HOM05D006998 ORTHO05D008733 8.7e-11 70.9 51 62.7
Mapoly0001s0548 Marchantia polymorpha HOM05D006998 ORTHO05D008733 1.6e-09 66.6 61 54.1
THA.LOC104801054 Tarenaya hassleriana HOM05D002401 ORTHO05D007109 6.2e-09 64.7 48 58.3
Pp3c11_10070 Physcomitrium patens HOM05D006998 ORTHO05D008733 6.5e-06 54.7 37 62.2


User provided reference genes

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