Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 9.2e-170 600.1 300 100.0
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 9.8e-156 553.5 297 92.3
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 6.0e-145 517.7 297 86.2
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 5.3e-133 478.0 299 79.9
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 5.4e-130 468.0 300 78.7
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 5.6e-127 458.0 300 76.3
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 4.5e-124 448.4 297 74.7
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 2.9e-123 445.7 299 75.6
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 1.1e-117 427.2 304 71.1
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 2.5e-111 406.0 243 82.3
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 4.1e-101 372.1 298 62.1
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.3e-99 367.1 297 63.3
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 8.5e-99 364.4 297 62.3
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 1.9e-98 363.2 297 61.3
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 2.5e-98 362.8 297 60.6
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 2.1e-97 359.8 297 62.0
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 1.1e-95 354.0 297 60.3
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 3.3e-95 352.4 297 60.9
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 7.4e-95 351.3 300 60.3
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 2.2e-94 349.7 299 58.9
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 3.7e-94 349.0 297 58.9
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 3.7e-94 349.0 298 60.1
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 1.1e-93 347.4 301 58.1
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.4e-93 347.1 297 57.9
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 2.4e-93 346.3 302 58.6
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 2.4e-93 346.3 302 58.6
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 6.9e-93 344.7 297 59.9
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 1.5e-92 343.6 297 58.2
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 2.6e-92 342.8 297 58.2
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 1.0e-91 340.9 307 58.6
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 2.9e-91 339.3 297 57.9
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 3.8e-91 339.0 299 57.5
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 6.5e-91 338.2 298 59.4
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 6.5e-91 338.2 297 56.2
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 8.5e-91 337.8 219 76.3
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 1.4e-90 337.0 299 58.2
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.4e-90 337.0 297 56.2
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 7.2e-90 334.7 299 57.5
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 9.4e-90 334.3 299 56.9
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 2.7e-89 332.8 301 56.1
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 1.0e-88 330.9 296 57.8
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 1.4e-88 330.5 296 57.4
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 2.3e-88 329.7 300 53.7
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 3.0e-88 329.3 297 56.6
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 6.7e-88 328.2 298 56.7
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 1.1e-87 327.4 297 56.6
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 1.1e-87 327.4 297 56.6
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 3.3e-87 325.9 303 55.1
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 5.7e-87 325.1 297 56.6
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 9.7e-87 324.3 299 55.5
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 9.7e-87 324.3 297 54.5
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 2.8e-86 322.8 298 56.4
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 3.7e-86 322.4 296 56.8
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 1.4e-85 320.5 296 55.1
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 2.4e-85 319.7 300 53.3
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 3.1e-85 319.3 317 53.0
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 4.1e-85 318.9 300 54.7
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 1.2e-84 317.4 297 55.2
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 2.0e-84 316.6 297 54.9
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 3.5e-84 315.8 296 56.8
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 3.5e-84 315.8 298 55.4
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.0e-83 314.3 300 55.0
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 1.0e-83 314.3 297 53.5
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 1.0e-83 314.3 302 55.0
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 1.7e-83 313.5 198 81.3
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 2.2e-83 313.2 300 53.3
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 3.8e-83 312.4 305 55.1
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 6.5e-83 311.6 300 53.7
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 1.1e-82 310.8 297 53.5
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 2.5e-82 309.7 302 52.6
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 3.2e-82 309.3 297 53.5
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 1.6e-81 307.0 301 51.8
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 2.7e-81 306.2 303 53.5
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 6.1e-81 305.1 301 53.8
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 6.1e-81 305.1 297 54.2
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 8.0e-81 304.7 305 54.1
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 8.8e-80 301.2 302 51.7
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 3.7e-78 295.8 300 51.7
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 1.8e-77 293.5 300 51.3
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 2.4e-77 293.1 301 51.5
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 3.8e-75 285.8 263 55.5
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 5.2e-72 275.4 298 48.0
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 1.1e-69 267.7 304 48.4
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 3.1e-69 266.2 267 50.2
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 5.9e-68 261.9 219 58.9
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 2.9e-67 259.6 328 44.2
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 2.7e-65 253.1 219 55.7
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 4.0e-64 249.2 298 47.7
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 2.2e-62 243.4 220 56.4
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 8.3e-62 241.5 297 45.8
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 2.0e-60 236.9 198 58.6
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 7.7e-60 235.0 239 50.2
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 2.1e-57 226.9 310 41.9
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 9.8e-55 218.0 230 52.6
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 1.3e-54 217.6 189 64.6
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 3.7e-54 216.1 289 42.6
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 3.5e-52 209.5 198 54.5
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 1.9e-50 203.8 191 52.9
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 1.8e-40 170.6 199 45.7
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.7e-38 164.1 341 33.7
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 4.1e-37 159.5 295 35.3
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 6.2e-33 145.6 121 58.7
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 2.2e-30 137.1 120 58.3
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.4e-29 134.4 216 39.4
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 9.9e-23 111.7 101 58.4
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 8.4e-22 108.6 122 50.8
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 1.8e-16 90.9 70 65.7
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 4.2e-13 79.7 114 38.6


User provided reference genes

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