Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 2.4e-96 355.5 184 100.0
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 3.2e-88 328.6 184 90.2
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 9.8e-82 307.0 184 86.4
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 1.3e-81 306.6 182 85.7
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 7.1e-72 274.2 184 77.2
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 6.0e-71 271.2 185 74.6
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 7.8e-71 270.8 188 75.0
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 2.5e-69 265.8 185 72.4
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 2.4e-67 259.2 186 70.4
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 3.1e-67 258.8 185 70.8
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 1.9e-64 249.6 184 66.3
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 5.4e-64 248.1 184 70.1
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 3.5e-63 245.4 186 66.7
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 2.3e-62 242.7 153 79.7
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.3e-62 242.7 188 68.1
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.3e-62 242.7 188 68.1
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 3.0e-62 242.3 153 80.4
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 3.3e-61 238.8 184 67.4
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 3.3e-61 238.8 184 69.6
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 9.6e-61 237.3 185 67.0
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 9.6e-61 237.3 184 64.1
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 1.3e-60 236.9 184 65.2
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 1.3e-60 236.9 184 66.3
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 1.6e-60 236.5 187 69.0
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 1.6e-60 236.5 184 67.4
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 8.1e-60 234.2 184 66.3
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 1.4e-59 233.4 184 67.4
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 1.8e-59 233.0 187 63.6
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 2.4e-59 232.6 184 67.4
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 4.0e-59 231.9 184 66.3
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 1.2e-58 230.3 184 65.8
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.2e-58 230.3 184 65.8
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 2.0e-58 229.6 184 68.5
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 2.0e-58 229.6 184 66.8
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 4.4e-58 228.4 184 64.7
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 7.6e-58 227.6 185 65.9
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 6.4e-57 224.6 185 62.7
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 1.4e-56 223.4 184 62.5
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 1.4e-56 223.4 184 66.3
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 1.9e-56 223.0 190 63.7
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 3.2e-56 222.2 191 60.2
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 4.2e-56 221.9 186 59.1
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 5.4e-56 221.5 195 62.6
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 6.0e-55 218.0 186 64.5
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 7.9e-55 217.6 186 59.1
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 7.9e-55 217.6 188 60.6
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 7.9e-55 217.6 188 62.8
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 3.0e-54 215.7 184 58.7
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 3.9e-54 215.3 186 58.1
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 5.1e-54 214.9 186 58.6
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 5.1e-54 214.9 186 58.6
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 8.7e-54 214.2 230 52.2
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 1.9e-53 213.0 186 65.1
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 3.3e-53 212.2 188 59.6
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 4.3e-53 211.8 194 61.9
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 5.6e-53 211.5 186 59.7
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 5.6e-53 211.5 184 62.5
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 5.6e-53 211.5 184 62.5
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 7.3e-53 211.1 187 58.8
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 1.6e-52 209.9 184 61.4
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 3.6e-52 208.8 184 58.7
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 8.1e-52 207.6 192 58.9
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 1.4e-51 206.8 186 58.1
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 1.4e-51 206.8 186 58.1
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 1.8e-51 206.5 185 61.1
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 4.0e-51 205.3 188 58.0
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 4.0e-51 205.3 189 54.5
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 4.0e-51 205.3 172 63.4
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 4.0e-51 205.3 185 58.9
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 1.5e-50 203.4 157 66.2
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 4.5e-50 201.8 189 57.7
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 4.5e-50 201.8 197 52.3
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 9.9e-50 200.7 184 60.3
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 2.2e-49 199.5 200 53.0
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 2.2e-49 199.5 133 74.4
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 2.4e-48 196.1 133 72.2
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 3.2e-48 195.7 141 70.2
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 7.1e-48 194.5 134 70.1
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.2e-47 193.7 213 55.4
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 2.7e-47 192.6 189 55.6
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 7.9e-47 191.0 206 51.9
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 3.9e-46 188.7 134 67.2
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 6.7e-46 188.0 134 70.9
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 1.1e-45 187.2 190 57.9
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.5e-45 186.8 188 57.4
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 7.4e-45 184.5 184 57.1
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 1.3e-44 183.7 225 48.9
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.6e-44 183.3 134 69.4
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 8.1e-44 181.0 146 67.1
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 8.1e-44 181.0 188 54.3
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 5.3e-43 178.3 142 64.8
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 1.5e-42 176.8 128 70.3
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 2.0e-42 176.4 142 65.5
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 1.3e-41 173.7 188 53.7
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 1.1e-40 170.6 229 45.4
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 3.5e-39 165.6 135 67.4
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 4.6e-39 165.2 206 51.0
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 1.3e-38 163.7 151 56.3
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 5.7e-37 158.3 184 48.4
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 9.0e-35 151.0 98 72.4
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 1.3e-33 147.1 91 75.8
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 1.9e-29 133.3 124 60.5
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 4.3e-29 132.1 73 78.1
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 3.7e-28 129.0 111 67.6
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.7e-28 129.0 74 75.7
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.4e-27 127.1 85 72.9
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.4e-27 127.1 192 43.2
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 2.0e-26 123.2 225 41.8
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.7e-25 120.2 122 59.8
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.7e-25 120.2 122 59.8
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 1.4e-24 117.1 207 36.7
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 1.1e-19 100.9 138 41.3
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 5.3e-11 72.0 117 48.7
Cre09.g401150 Chlamydomonas reinhardtii HOM05D006936 ORTHO05D008273 2.5e-08 63.2 136 32.4
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 3.2e-08 62.8 66 59.1
vmacro02234 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 5.5e-08 62.0 71 52.1
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 9.4e-08 61.2 58 48.3
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 4.0e-06 55.8 117 40.2


User provided reference genes

Program Settings