Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 2.1e-117 426.0 263 100.0
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 1.2e-101 373.6 266 83.1
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 1.2e-96 357.1 266 83.8
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 5.0e-87 325.1 270 76.3
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 2.5e-70 269.6 293 61.1
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 1.2e-67 260.8 260 65.8
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 6.3e-66 255.0 321 61.4
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 2.0e-64 250.0 267 65.9
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.2e-61 240.7 262 52.7
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 1.0e-60 237.7 282 50.0
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 3.5e-56 222.6 279 56.3
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 6.0e-56 221.9 338 47.9
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 7.8e-56 221.5 270 58.1
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 3.0e-55 219.5 270 54.4
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 3.9e-55 219.2 309 53.7
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 1.1e-54 217.6 274 62.0
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 2.5e-54 216.5 150 74.0
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 3.3e-54 216.1 265 55.1
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 4.3e-54 215.7 330 46.4
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 4.3e-54 215.7 303 54.5
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 5.6e-54 215.3 150 73.3
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 7.3e-54 214.9 289 51.6
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 2.1e-53 213.4 265 51.7
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 2.8e-53 213.0 118 83.1
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 8.0e-53 211.5 136 72.8
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.4e-52 210.7 309 44.3
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 3.1e-52 209.5 343 43.1
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 3.1e-52 209.5 119 81.5
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 3.1e-52 209.5 284 48.9
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 5.2e-52 208.8 277 53.1
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 5.2e-52 208.8 291 50.9
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 6.8e-52 208.4 301 49.8
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 6.8e-52 208.4 285 57.2
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 8.9e-52 208.0 306 47.1
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 8.9e-52 208.0 118 80.5
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 1.2e-51 207.6 315 48.6
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 2.0e-51 206.8 279 53.8
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 2.0e-51 206.8 117 82.1
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 3.4e-51 206.1 295 55.6
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 7.5e-51 204.9 333 45.6
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 9.8e-51 204.5 145 75.9
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 1.3e-50 204.1 119 78.2
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 1.3e-50 204.1 117 81.2
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 2.9e-50 203.0 348 44.8
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 2.9e-50 203.0 301 48.8
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 3.7e-50 202.6 292 50.7
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 4.9e-50 202.2 265 53.2
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.9e-50 202.2 292 48.6
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 4.9e-50 202.2 119 79.0
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 6.4e-50 201.8 285 50.9
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.4e-49 200.7 140 69.3
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 1.4e-49 200.7 285 51.6
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.9e-49 200.3 266 52.6
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 1.9e-49 200.3 294 53.4
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 1.9e-49 200.3 308 48.7
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 4.1e-49 199.1 315 49.8
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 4.1e-49 199.1 304 45.7
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 4.1e-49 199.1 119 76.5
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 2.0e-48 196.8 313 45.4
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 2.0e-48 196.8 285 46.3
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 2.0e-48 196.8 289 57.4
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.3e-47 194.1 307 50.2
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.7e-47 193.7 302 52.0
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 5.0e-47 192.2 301 51.8
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 6.6e-47 191.8 287 53.7
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 1.1e-46 191.0 297 53.9
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 1.9e-46 190.3 301 44.5
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 3.3e-46 189.5 312 49.0
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 4.3e-46 189.1 293 54.6
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 4.3e-46 189.1 293 54.6
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 4.3e-46 189.1 293 54.6
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 4.3e-46 189.1 293 54.6
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 7.3e-46 188.3 274 58.4
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 9.5e-46 188.0 285 55.1
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 4.7e-45 185.7 257 51.0
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 6.2e-45 185.3 111 73.9
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 6.2e-45 185.3 358 43.3
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 1.8e-44 183.7 300 52.7
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 1.8e-44 183.7 311 50.2
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 2.3e-44 183.3 265 52.5
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 8.9e-44 181.4 279 48.4
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 1.2e-43 181.0 133 65.4
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.2e-43 181.0 282 49.3
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.2e-43 181.0 290 45.2
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 2.0e-43 180.3 247 50.2
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 2.6e-43 179.9 138 64.5
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 2.6e-43 179.9 138 64.5
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.6e-43 179.9 277 49.5
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 5.8e-43 178.7 324 50.0
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 7.5e-43 178.3 324 46.6
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 7.5e-43 178.3 250 51.6
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 9.9e-43 177.9 302 50.7
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 9.9e-43 177.9 305 49.8
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 2.2e-42 176.8 422 35.8
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.9e-42 176.4 269 44.6
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 2.9e-42 176.4 140 59.3
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 3.7e-42 176.0 107 76.6
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 4.9e-42 175.6 422 35.5
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 1.1e-41 174.5 233 53.2
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 1.9e-41 173.7 355 43.9
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 2.4e-41 173.3 334 41.9
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 2.4e-41 173.3 240 51.2
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 5.4e-41 172.2 238 52.1
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 7.1e-41 171.8 400 39.8
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 7.1e-41 171.8 119 67.2
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 9.2e-41 171.4 186 53.8
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 1.2e-40 171.0 336 40.8
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 2.7e-40 169.9 119 67.2
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.7e-40 169.9 316 44.0
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.7e-40 169.9 137 62.0
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 4.6e-40 169.1 304 49.7
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 1.3e-39 167.5 141 65.2
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-39 167.5 208 55.3
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 5.1e-39 165.6 121 66.1
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.1e-38 164.5 115 67.0
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 2.5e-38 163.3 287 50.2
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 7.3e-38 161.8 187 49.2
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.2e-37 161.0 115 67.0
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.6e-37 160.6 299 40.5
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 1.6e-37 160.6 286 38.8
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 2.1e-37 160.2 142 63.4
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 2.1e-37 160.2 117 65.8
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 2.8e-37 159.8 117 65.8
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 3.6e-37 159.5 117 65.8
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 6.2e-37 158.7 113 65.5
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 1.1e-36 157.9 290 49.7
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.4e-36 156.8 137 59.9
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 4.0e-36 156.0 142 60.6
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 6.8e-36 155.2 118 65.3
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 8.9e-36 154.8 250 44.8
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 2.6e-35 153.3 123 63.4
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 5.8e-35 152.1 109 66.1
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 5.8e-35 152.1 116 64.7
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 9.9e-35 151.4 92 80.4
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.3e-34 151.0 123 60.2
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.7e-34 150.6 228 48.7
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 2.4e-33 146.7 118 66.9
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 9.2e-33 144.8 126 56.3
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 2.1e-32 143.7 270 45.9
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.1e-32 143.7 185 50.8
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 3.5e-32 142.9 122 62.3
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 7.8e-32 141.7 109 58.7
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 1.0e-31 141.4 281 51.2
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.3e-31 141.0 115 57.4
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 3.9e-31 139.4 245 37.6
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 1.9e-30 137.1 141 54.6
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 5.6e-30 135.6 271 50.9
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 5.6e-30 135.6 141 57.4
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 7.3e-30 135.2 111 58.6
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 9.6e-30 134.8 145 48.3
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.2e-29 134.4 117 54.7
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 1.2e-29 134.4 109 55.0
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 1.6e-29 134.0 112 58.0
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 2.1e-29 133.7 112 58.0
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 2.1e-29 133.7 112 58.0
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 2.1e-29 133.7 112 58.0
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 3.6e-29 132.9 108 55.6
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 4.7e-29 132.5 113 55.8
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 5.2e-28 129.0 106 54.7
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 2.6e-27 126.7 120 54.2
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 3.4e-27 126.3 118 51.7
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.3e-26 124.4 114 51.8
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 2.2e-26 123.6 309 36.2
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 3.8e-26 122.9 282 39.4
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 4.2e-25 119.4 124 50.8
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 2.1e-24 117.1 90 55.6
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 1.3e-23 114.4 102 53.9
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 1.5e-22 110.9 109 51.4
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 5.8e-19 99.0 111 46.8
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 8.4e-18 95.1 46 82.6
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 8.4e-18 95.1 135 43.7
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 7.9e-16 88.6 116 44.0
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 5.1e-15 85.9 107 44.9
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 3.3e-14 83.2 110 44.5
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 4.8e-13 79.3 67 56.7
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 6.2e-13 79.0 118 42.4
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla HOM05D003750 ORTHO05D004337 5.3e-12 75.9 216 39.8
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 2.6e-11 73.6 108 38.9
TPR.G23241 Trifolium pratense HOM05D003750 ORTHO05D004337 1.3e-10 71.2 155 52.9
Rhsim06G0118300 Rhododendron simsii HOM05D003750 ORTHO05D004337 1.9e-09 67.4 53 66.0
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 4.2e-09 66.2 117 35.9
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 7.9e-08 62.0 107 32.7
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.0e-07 61.6 114 32.5
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 9.6e-06 55.1 87 33.3


User provided reference genes

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