Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G032000 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 2.5e-71 271.9 129 100.0
Phvul.009G096700 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 1.5e-39 166.4 97 86.6
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 8.0e-22 107.5 71 74.6
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 5.2e-21 104.8 71 73.2
TPR.G30202 Trifolium pratense HOM05D000002 ORTHO05D000001 4.1e-18 95.1 78 61.5
Ca_19997_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.7e-14 81.6 92 51.1
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 8.0e-14 80.9 90 47.8
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 2.3e-13 79.3 85 44.7
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 2.3e-13 79.3 85 44.7
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 2.3e-13 79.3 85 44.7
Duzib264G1061 Durio zibethinus HOM05D000002 ORTHO05D000047 2.3e-13 79.3 85 44.7
Cpa.g.sc168.8 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-12 75.9 90 43.3
Cpa.g.sc32.91 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-12 74.3 106 42.5
HPP92_024459 Vanilla planifolia HOM05D000002 ORTHO05D000047 7.5e-12 74.3 77 48.1
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 7.5e-12 74.3 77 48.1
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 1.7e-11 73.2 85 43.5
HPP92_021418 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.4e-11 71.2 77 46.8
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 1.4e-10 70.1 85 47.1
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 3.2e-10 68.9 75 42.7
Cpa.g.sc148.30 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-10 68.2 79 44.3
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 9.2e-10 67.4 88 40.9
Cpa.g.sc164.9 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-09 67.0 45 62.2
Ca_14756_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 1.6e-09 66.6 61 54.1
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-09 66.6 74 48.6
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 2.0e-09 66.2 64 48.4
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 1.0e-08 63.9 66 42.4
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-08 62.0 108 36.1
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 5.0e-08 61.6 59 47.5
SHI01377 Sapria himalayana HOM05D000002 ORTHO05D000047 5.0e-08 61.6 30 73.3
Hma1.2p1_0316F.1_g123090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-08 61.2 87 36.8
SHI25275 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-08 61.2 37 62.2
Hma1.2p1_1555F.1_g290480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-07 60.1 65 41.5
Hma1.2p1_1789F.1_g302470 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-07 59.7 74 45.9
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-07 58.9 84 39.3
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-07 58.5 78 37.2
Phvul.008G096100 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 4.3e-07 58.5 49 49.0
TPR.G27608 Trifolium pratense HOM05D000002 ORTHO05D000047 7.3e-07 57.8 83 42.2
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 9.5e-07 57.4 94 37.2
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 57.0 76 38.2
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-06 56.2 87 36.8
Atru.chr2.1875 Acer truncatum HOM05D000002 ORTHO05D000047 2.8e-06 55.8 112 33.0
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-06 55.8 60 43.3
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-06 55.8 60 43.3
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-06 55.5 60 41.7
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-06 55.5 56 44.6
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-06 55.1 87 35.6
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-06 55.1 87 35.6
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.2e-06 54.7 87 35.6
Hma1.2p1_1042F.1_g251150 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.2e-06 54.7 49 42.9
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 6.2e-06 54.7 109 33.0
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-06 54.3 87 35.6
HPP92_025430 Vanilla planifolia HOM05D005168 ORTHO05D000047 8.1e-06 54.3 26 80.8


User provided reference genes

Program Settings