Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G026300 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.1e-62 241.1 115 100.0
Phvul.006G025700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 8.1e-58 226.9 115 92.2
Phvul.006G025800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.2e-56 223.0 115 90.4
Phvul.006G025840 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.0e-56 222.2 115 90.4
Phvul.006G025500 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 9.9e-56 219.9 115 90.4
Phvul.006G025880 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.9e-55 218.4 115 89.6
Phvul.006G026040 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.2e-54 214.9 115 87.0
Phvul.006G025600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 8.7e-52 206.8 110 87.3
Phvul.006G026100 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.1e-46 189.9 98 87.8
Phvul.006G026000 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.5e-43 178.7 91 87.9
VMungo1309G0604 Vigna mungo HOM05D008977 ORTHO05D011276 1.1e-41 173.3 114 72.8
VMungo0540G0820 Vigna mungo HOM05D008977 ORTHO05D011276 6.7e-36 154.1 113 61.9
Phvul.006G026700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 9.6e-27 123.6 114 49.1
Glyma.18G113600 Glycine max HOM05D008977 ORTHO05D011276 8.2e-26 120.6 113 48.7
Phvul.006G026800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.3e-23 113.2 119 49.6
Phvul.006G026900 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.4e-22 109.8 114 46.5
Phvul.006G026600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.1e-21 105.9 114 46.5
Phvul.007G022400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 6.7e-20 100.9 114 43.9
VMungo1309G2336 Vigna mungo HOM05D008977 ORTHO05D011276 3.7e-18 95.1 114 44.7
Phvul.006G026200 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.4e-17 92.4 116 42.2
Glyma.08G304900 Glycine max HOM05D008977 ORTHO05D011276 6.9e-17 90.9 114 43.9
Glyma.18G114600 Glycine max HOM05D008977 ORTHO05D011276 6.9e-17 90.9 115 44.3
Glyma.18G114100 Glycine max HOM05D008977 ORTHO05D011276 1.2e-16 90.1 115 44.3
Glyma.18G114200 Glycine max HOM05D008977 ORTHO05D011276 1.2e-16 90.1 115 44.3
Glyma.18G114300 Glycine max HOM05D008977 ORTHO05D011276 1.2e-16 90.1 115 44.3
Glyma.18G114400 Glycine max HOM05D008977 ORTHO05D011276 1.5e-16 89.7 115 44.3
Glyma.18G114500 Glycine max HOM05D008977 ORTHO05D011276 3.4e-16 88.6 115 44.3
Phvul.006G026400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.2e-15 85.9 114 41.2
Glyma.08G304800 Glycine max HOM05D008977 ORTHO05D011276 8.5e-15 84.0 116 43.1
Glyma.03G026975 Glycine max HOM05D008977 ORTHO05D011276 1.1e-14 83.6 116 41.4
Glyma.03G026500 Glycine max HOM05D008977 ORTHO05D011276 7.2e-14 80.9 116 40.5
Glyma.03G026950 Glycine max HOM05D008977 ORTHO05D011276 4.6e-13 78.2 117 38.5
Glyma.19G169633 Glycine max HOM05D008977 ORTHO05D011276 8.8e-12 73.9 116 40.5
Medtr3g046350 Medicago truncatula HOM05D008977 ORTHO05D003378 2.0e-11 72.8 103 38.8
Lalb_Chr12g0203611 Lupinus albus HOM05D006508 ORTHO05D003378 4.3e-11 71.6 108 35.2
Glyma.03G026200 Glycine max HOM05D008977 ORTHO05D011276 4.8e-10 68.2 114 36.8
Lalb_Chr12g0203601 Lupinus albus HOM05D006508 ORTHO05D003378 4.1e-09 65.1 108 31.5
Cpa.g.c39334 Carica papaya HOM05D000275 ORTHO05D003378 5.3e-09 64.7 100 34.0
Lalb_Chr07g0188461 Lupinus albus HOM05D000275 ORTHO05D003378 6.9e-09 64.3 85 37.6
Lalb_Chr07g0188521 Lupinus albus HOM05D000275 ORTHO05D003378 6.9e-09 64.3 85 37.6
Lalb_Chr12g0203591 Lupinus albus HOM05D006508 ORTHO05D003378 6.9e-09 64.3 108 31.5
CiPaw.10G075800 Carya illinoinensis HOM05D006508 ORTHO05D003378 9.1e-09 63.9 102 31.4
CiPaw.10G076000 Carya illinoinensis HOM05D006508 ORTHO05D003378 4.5e-08 61.6 102 31.4
PGR044G0303 Punica granatum HOM05D006508 ORTHO05D003378 5.9e-08 61.2 82 31.7
TAR629G2992 Trochodendron aralioides HOM05D006508 ORTHO05D003378 5.9e-08 61.2 80 38.8
Nn7g35873 Nelumbo nucifera HOM05D000275 ORTHO05D000181 1.3e-07 60.1 112 31.2
Ciclev10018268m.g Citrus clementina HOM05D000275 ORTHO05D003378 1.7e-07 59.7 110 34.5
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 3.8e-07 58.5 117 31.6
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 3.8e-07 58.5 117 31.6
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 1.4e-06 56.6 110 30.9
TAR626G1122 Trochodendron aralioides HOM05D000275 ORTHO05D003378 1.9e-06 56.2 82 34.1
Potri.014G046500 Populus trichocarpa HOM05D000275 ORTHO05D000181 2.5e-06 55.8 108 33.3
COL.COLO4_28960 Corchorus olitorius HOM05D000275 ORTHO05D000181 3.2e-06 55.5 113 31.0
Medtr1g040330 Medicago truncatula HOM05D000275 ORTHO05D000181 3.2e-06 55.5 105 30.5
COL.COLO4_12457 Corchorus olitorius HOM05D000275 ORTHO05D000181 4.2e-06 55.1 111 31.5
Actinidia32496 Actinidia chinensis HOM05D000275 ORTHO05D000181 5.5e-06 54.7 109 29.4
COL.COLO4_12420 Corchorus olitorius HOM05D000275 ORTHO05D000181 5.5e-06 54.7 111 31.5
QL04p068109 Quercus lobata HOM05D006508 ORTHO05D003378 7.2e-06 54.3 116 29.3
QL04p068115 Quercus lobata HOM05D006508 ORTHO05D003378 7.2e-06 54.3 116 29.3


User provided reference genes

Program Settings