Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G026000 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.1e-48 195.3 91 100.0
Phvul.006G025800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.5e-46 188.3 91 96.7
Phvul.006G025700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.3e-46 188.0 91 96.7
Phvul.006G025880 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 7.3e-46 186.8 91 95.6
Phvul.006G026040 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.3e-45 186.0 91 95.6
Phvul.006G025840 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.1e-45 185.3 91 95.6
Phvul.006G025500 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.8e-45 184.9 91 95.6
Phvul.006G026100 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 9.0e-44 179.9 91 92.3
Phvul.006G026300 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 7.6e-43 176.8 91 87.9
Phvul.006G025600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.3e-42 176.0 91 90.1
VMungo1309G0604 Vigna mungo HOM05D008977 ORTHO05D011276 1.8e-28 129.0 91 64.8
VMungo0540G0820 Vigna mungo HOM05D008977 ORTHO05D011276 1.9e-22 109.0 88 52.3
Phvul.006G026700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.4e-19 98.2 88 50.0
Glyma.18G113600 Glycine max HOM05D008977 ORTHO05D011276 1.1e-17 93.2 88 47.7
Phvul.006G026800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.2e-16 89.7 91 47.3
Phvul.006G026600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 7.9e-16 87.0 88 46.6
Phvul.006G026900 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.0e-15 86.7 88 47.7
Phvul.007G022400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 5.7e-14 80.9 88 44.3
Lalb_Chr12g0203611 Lupinus albus HOM05D006508 ORTHO05D003378 3.8e-10 68.2 81 39.5
Phvul.006G026200 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 6.5e-10 67.4 93 41.9
Lalb_Chr12g0203601 Lupinus albus HOM05D006508 ORTHO05D003378 5.5e-09 64.3 81 35.8
Lalb_Chr12g0203591 Lupinus albus HOM05D006508 ORTHO05D003378 9.4e-09 63.5 81 35.8
VMungo1309G2336 Vigna mungo HOM05D008977 ORTHO05D011276 1.2e-08 63.2 89 38.2
Glyma.18G114600 Glycine max HOM05D008977 ORTHO05D011276 1.6e-08 62.8 94 38.3
Phvul.006G026400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.6e-08 62.8 91 39.6
Glyma.08G304900 Glycine max HOM05D008977 ORTHO05D011276 2.1e-08 62.4 89 40.4
Glyma.18G114100 Glycine max HOM05D008977 ORTHO05D011276 2.7e-08 62.0 94 38.3
Glyma.18G114200 Glycine max HOM05D008977 ORTHO05D011276 2.7e-08 62.0 94 38.3
Glyma.18G114300 Glycine max HOM05D008977 ORTHO05D011276 2.7e-08 62.0 94 38.3
Glyma.18G114400 Glycine max HOM05D008977 ORTHO05D011276 3.6e-08 61.6 94 38.3
Glyma.18G114500 Glycine max HOM05D008977 ORTHO05D011276 6.1e-08 60.8 94 38.3
Lalb_Chr07g0188461 Lupinus albus HOM05D000275 ORTHO05D003378 7.9e-08 60.5 81 35.8
Lalb_Chr07g0188521 Lupinus albus HOM05D000275 ORTHO05D003378 7.9e-08 60.5 81 35.8
TAR629G2992 Trochodendron aralioides HOM05D006508 ORTHO05D003378 1.4e-07 59.7 80 37.5
Glyma.03G026925 Glycine max HOM05D008977 ORTHO05D011276 1.8e-07 59.3 92 31.5
PGR044G0303 Punica granatum HOM05D006508 ORTHO05D003378 1.8e-07 59.3 89 31.5
Ciclev10018268m.g Citrus clementina HOM05D000275 ORTHO05D003378 2.3e-07 58.9 81 39.5
Glyma.03G026500 Glycine max HOM05D008977 ORTHO05D011276 3.9e-07 58.2 92 33.7
Glyma.08G304800 Glycine max HOM05D008977 ORTHO05D011276 3.9e-07 58.2 93 36.6
Glyma.03G026950 Glycine max HOM05D008977 ORTHO05D011276 5.1e-07 57.8 92 32.6
Medtr1g040330 Medicago truncatula HOM05D000275 ORTHO05D000181 1.1e-06 56.6 81 32.1
Glyma.19G169666 Glycine max HOM05D008977 ORTHO05D011276 1.5e-06 56.2 89 37.1
Nn7g35873 Nelumbo nucifera HOM05D000275 ORTHO05D000181 2.0e-06 55.8 81 33.3
TAR626G1122 Trochodendron aralioides HOM05D000275 ORTHO05D003378 2.6e-06 55.5 81 34.6
Potri.014G046500 Populus trichocarpa HOM05D000275 ORTHO05D000181 5.7e-06 54.3 84 34.5
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 5.7e-06 54.3 82 35.4
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 5.7e-06 54.3 82 35.4
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 5.7e-06 54.3 81 34.6
HPP92_021879 Vanilla planifolia HOM05D006508 ORTHO05D003378 5.7e-06 54.3 89 34.8


User provided reference genes

Program Settings