Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G025880 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.7e-60 235.7 115 100.0
Phvul.006G025500 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 6.2e-58 227.3 115 96.5
Phvul.006G025700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 5.2e-57 224.2 115 94.8
Phvul.006G025800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.0e-56 222.2 115 93.9
Phvul.006G025840 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.4e-56 221.5 115 93.9
Phvul.006G026040 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 7.6e-56 220.3 115 92.2
Phvul.006G026300 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.2e-54 214.5 115 89.6
Phvul.006G025600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.5e-53 211.5 110 92.7
Phvul.006G026100 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.3e-47 193.0 98 91.8
Phvul.006G026000 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 9.3e-46 186.8 91 95.6
VMungo1309G0604 Vigna mungo HOM05D008977 ORTHO05D011276 6.0e-37 157.5 114 66.7
VMungo0540G0820 Vigna mungo HOM05D008977 ORTHO05D011276 5.8e-32 141.0 111 59.5
Phvul.006G026700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.4e-25 119.0 111 49.5
Glyma.18G113600 Glycine max HOM05D008977 ORTHO05D011276 3.8e-23 111.7 111 47.7
Phvul.006G026800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.6e-21 104.8 119 47.1
Phvul.006G026600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.0e-20 103.6 111 46.8
Phvul.006G026900 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.3e-20 102.4 111 46.8
Phvul.007G022400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.3e-19 98.2 111 44.1
VMungo1309G2336 Vigna mungo HOM05D008977 ORTHO05D011276 1.0e-15 87.0 112 43.8
Glyma.18G114600 Glycine max HOM05D008977 ORTHO05D011276 2.2e-15 85.9 115 43.5
Phvul.006G026200 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.2e-15 85.9 116 42.2
Glyma.18G114100 Glycine max HOM05D008977 ORTHO05D011276 3.8e-15 85.1 115 43.5
Glyma.18G114200 Glycine max HOM05D008977 ORTHO05D011276 3.8e-15 85.1 115 43.5
Glyma.18G114300 Glycine max HOM05D008977 ORTHO05D011276 3.8e-15 85.1 115 43.5
Glyma.08G304900 Glycine max HOM05D008977 ORTHO05D011276 5.0e-15 84.7 112 42.9
Glyma.18G114400 Glycine max HOM05D008977 ORTHO05D011276 5.0e-15 84.7 115 43.5
Glyma.18G114500 Glycine max HOM05D008977 ORTHO05D011276 1.1e-14 83.6 115 43.5
Glyma.08G304800 Glycine max HOM05D008977 ORTHO05D011276 3.2e-14 82.0 116 42.2
Glyma.03G026975 Glycine max HOM05D008977 ORTHO05D011276 2.7e-13 79.0 116 39.7
Phvul.006G026400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.6e-13 78.6 112 40.2
Glyma.03G026500 Glycine max HOM05D008977 ORTHO05D011276 8.8e-12 73.9 116 38.8
Medtr3g046350 Medicago truncatula HOM05D008977 ORTHO05D003378 8.8e-12 73.9 103 39.8
Glyma.03G026950 Glycine max HOM05D008977 ORTHO05D011276 2.0e-11 72.8 118 37.3
Lalb_Chr12g0203611 Lupinus albus HOM05D006508 ORTHO05D003378 9.7e-11 70.5 108 36.1
Glyma.19G169666 Glycine max HOM05D008977 ORTHO05D011276 1.7e-10 69.7 116 39.7
Glyma.19G169633 Glycine max HOM05D008977 ORTHO05D011276 3.7e-10 68.6 114 40.4
Lalb_Chr12g0203601 Lupinus albus HOM05D006508 ORTHO05D003378 1.4e-09 66.6 108 33.3
Lalb_Chr12g0203591 Lupinus albus HOM05D006508 ORTHO05D003378 2.4e-09 65.9 108 33.3
Glyma.03G026200 Glycine max HOM05D008977 ORTHO05D011276 5.3e-09 64.7 114 36.0
Lalb_Chr07g0188461 Lupinus albus HOM05D000275 ORTHO05D003378 7.7e-08 60.8 110 32.7
Lalb_Chr07g0188521 Lupinus albus HOM05D000275 ORTHO05D003378 7.7e-08 60.8 110 32.7
Ciclev10018268m.g Citrus clementina HOM05D000275 ORTHO05D003378 1.0e-07 60.5 82 40.2
PGR044G0303 Punica granatum HOM05D006508 ORTHO05D003378 2.2e-07 59.3 82 31.7
TAR629G2992 Trochodendron aralioides HOM05D006508 ORTHO05D003378 2.9e-07 58.9 102 34.3
Actinidia32496 Actinidia chinensis HOM05D000275 ORTHO05D000181 3.8e-07 58.5 109 31.2
Actinidia32499 Actinidia chinensis HOM05D000275 ORTHO05D000181 5.0e-07 58.2 109 33.0
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 5.0e-07 58.2 117 31.6
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 5.0e-07 58.2 117 31.6
Medtr3g464110 Medicago truncatula HOM05D000275 ORTHO05D003378 6.5e-07 57.8 75 34.7
Sopen01g036140 Solanum pennellii HOM05D000275 ORTHO05D000181 8.5e-07 57.4 116 32.8
RcHm_v2.0_Chr5g0001761 Rosa chinensis HOM05D000275 ORTHO05D003378 1.1e-06 57.0 100 34.0
Actinidia12149 Actinidia chinensis HOM05D000275 ORTHO05D000181 1.4e-06 56.6 110 31.8
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.4e-06 56.6 92 30.4
Potri.014G046500 Populus trichocarpa HOM05D000275 ORTHO05D000181 1.4e-06 56.6 108 34.3
TAR626G1122 Trochodendron aralioides HOM05D000275 ORTHO05D003378 1.4e-06 56.6 82 35.4
Medtr1g040330 Medicago truncatula HOM05D000275 ORTHO05D000181 1.9e-06 56.2 107 29.9
COL.COLO4_12457 Corchorus olitorius HOM05D000275 ORTHO05D000181 3.2e-06 55.5 113 31.0
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 3.2e-06 55.5 82 35.4
Solyc01g090350.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 3.2e-06 55.5 116 32.8
Actinidia29298 Actinidia chinensis HOM05D000275 ORTHO05D010802 5.5e-06 54.7 104 29.8
COL.COLO4_28960 Corchorus olitorius HOM05D000275 ORTHO05D000181 5.5e-06 54.7 113 31.0
COL.COLO4_12420 Corchorus olitorius HOM05D000275 ORTHO05D000181 7.2e-06 54.3 111 31.5
Nn7g35873 Nelumbo nucifera HOM05D000275 ORTHO05D000181 7.2e-06 54.3 112 30.4
QL04p068109 Quercus lobata HOM05D006508 ORTHO05D003378 7.2e-06 54.3 116 28.4
QL04p068115 Quercus lobata HOM05D006508 ORTHO05D003378 7.2e-06 54.3 116 28.4
CSS0017347 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 9.4e-06 53.9 105 27.6
CSS0044936 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 9.4e-06 53.9 103 28.2
PGSC0003DMG400025988 Solanum tuberosum HOM05D000275 ORTHO05D000181 9.4e-06 53.9 116 31.0


User provided reference genes

Program Settings