Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G025700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.6e-61 237.7 115 100.0
Phvul.006G025800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.9e-59 232.3 115 97.4
Phvul.006G025840 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.3e-59 231.5 115 97.4
Phvul.006G025500 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.7e-58 227.6 115 96.5
Phvul.006G025880 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.4e-57 226.1 115 94.8
Phvul.006G026300 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.1e-57 224.9 115 92.2
Phvul.006G026040 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 5.2e-57 224.2 115 93.9
Phvul.006G025600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.2e-54 214.5 110 92.7
Phvul.006G026100 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 9.0e-49 196.8 98 93.9
Phvul.006G026000 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.2e-46 188.0 91 96.7
VMungo1309G0604 Vigna mungo HOM05D008977 ORTHO05D011276 6.4e-39 164.1 114 68.4
VMungo0540G0820 Vigna mungo HOM05D008977 ORTHO05D011276 3.7e-34 148.3 111 60.4
Phvul.006G026700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.6e-26 122.9 111 51.4
Glyma.18G113600 Glycine max HOM05D008977 ORTHO05D011276 3.1e-25 118.6 111 50.5
Phvul.006G026800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 5.0e-23 111.3 119 48.7
Phvul.006G026600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.5e-22 109.0 111 49.5
Phvul.006G026900 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.2e-22 108.6 111 48.6
Phvul.007G022400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.0e-20 103.6 111 46.8
VMungo1309G2336 Vigna mungo HOM05D008977 ORTHO05D011276 4.8e-18 94.7 112 46.4
Phvul.006G026200 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 6.9e-17 90.9 116 44.0
Glyma.18G114600 Glycine max HOM05D008977 ORTHO05D011276 4.5e-16 88.2 115 43.5
Glyma.18G114100 Glycine max HOM05D008977 ORTHO05D011276 7.7e-16 87.4 115 43.5
Glyma.18G114200 Glycine max HOM05D008977 ORTHO05D011276 7.7e-16 87.4 115 43.5
Glyma.18G114300 Glycine max HOM05D008977 ORTHO05D011276 7.7e-16 87.4 115 43.5
Glyma.08G304900 Glycine max HOM05D008977 ORTHO05D011276 1.0e-15 87.0 112 43.8
Glyma.18G114400 Glycine max HOM05D008977 ORTHO05D011276 1.0e-15 87.0 115 43.5
Glyma.08G304800 Glycine max HOM05D008977 ORTHO05D011276 2.2e-15 85.9 116 44.0
Glyma.18G114500 Glycine max HOM05D008977 ORTHO05D011276 2.2e-15 85.9 115 43.5
Glyma.03G026975 Glycine max HOM05D008977 ORTHO05D011276 1.4e-14 83.2 116 41.4
Phvul.006G026400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.4e-14 83.2 112 42.0
Glyma.03G026500 Glycine max HOM05D008977 ORTHO05D011276 3.6e-13 78.6 116 39.7
Glyma.03G026950 Glycine max HOM05D008977 ORTHO05D011276 1.4e-12 76.6 117 37.6
Medtr3g046350 Medicago truncatula HOM05D008977 ORTHO05D003378 1.1e-11 73.6 103 39.8
Glyma.19G169633 Glycine max HOM05D008977 ORTHO05D011276 1.5e-11 73.2 114 41.2
Lalb_Chr12g0203611 Lupinus albus HOM05D006508 ORTHO05D003378 1.5e-11 73.2 108 36.1
Lalb_Chr12g0203601 Lupinus albus HOM05D006508 ORTHO05D003378 2.2e-10 69.3 108 33.3
Lalb_Chr12g0203591 Lupinus albus HOM05D006508 ORTHO05D003378 3.7e-10 68.6 108 33.3
Glyma.03G026200 Glycine max HOM05D008977 ORTHO05D011276 4.8e-10 68.2 114 37.7
Psat0s13238g0040 Pisum sativum HOM05D000275 ORTHO05D003378 4.8e-10 68.2 113 35.4
Lalb_Chr07g0188461 Lupinus albus HOM05D000275 ORTHO05D003378 1.5e-08 63.2 85 36.5
Lalb_Chr07g0188521 Lupinus albus HOM05D000275 ORTHO05D003378 1.5e-08 63.2 85 36.5
Ciclev10018268m.g Citrus clementina HOM05D000275 ORTHO05D003378 3.4e-08 62.0 110 36.4
TAR629G2992 Trochodendron aralioides HOM05D006508 ORTHO05D003378 5.9e-08 61.2 80 38.8
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 1.0e-07 60.5 117 32.5
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 1.0e-07 60.5 117 32.5
Potri.014G046500 Populus trichocarpa HOM05D000275 ORTHO05D000181 2.2e-07 59.3 108 35.2
PGR044G0303 Punica granatum HOM05D006508 ORTHO05D003378 2.2e-07 59.3 82 31.7
COL.COLO4_12457 Corchorus olitorius HOM05D000275 ORTHO05D000181 2.9e-07 58.9 111 33.3
COL.COLO4_28960 Corchorus olitorius HOM05D000275 ORTHO05D000181 2.9e-07 58.9 113 32.7
Nn7g35873 Nelumbo nucifera HOM05D000275 ORTHO05D000181 2.9e-07 58.9 112 31.2
COL.COLO4_12420 Corchorus olitorius HOM05D000275 ORTHO05D000181 3.8e-07 58.5 111 33.3
Medtr1g040330 Medicago truncatula HOM05D000275 ORTHO05D000181 6.5e-07 57.8 105 31.4
TAR626G1122 Trochodendron aralioides HOM05D000275 ORTHO05D003378 8.5e-07 57.4 82 35.4
Actinidia32496 Actinidia chinensis HOM05D000275 ORTHO05D000181 1.4e-06 56.6 109 30.3
QL04p068109 Quercus lobata HOM05D006508 ORTHO05D003378 1.4e-06 56.6 116 30.2
QL04p068115 Quercus lobata HOM05D006508 ORTHO05D003378 1.4e-06 56.6 116 30.2
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 1.9e-06 56.2 110 30.9
RcHm_v2.0_Chr5g0001761 Rosa chinensis HOM05D000275 ORTHO05D003378 1.9e-06 56.2 100 34.0
CSS0017347 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 2.5e-06 55.8 111 29.7
CSS0044936 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 3.2e-06 55.5 109 29.4
HPP92_021879 Vanilla planifolia HOM05D006508 ORTHO05D003378 3.2e-06 55.5 85 31.8
Actinidia12149 Actinidia chinensis HOM05D000275 ORTHO05D000181 4.2e-06 55.1 110 30.9
CAN.G345.2 Capsicum annuum HOM05D000275 ORTHO05D000181 5.5e-06 54.7 95 31.6
Sopen01g036140 Solanum pennellii HOM05D000275 ORTHO05D000181 5.5e-06 54.7 116 31.9


User provided reference genes

Program Settings