Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G025600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.0e-58 228.8 110 100.0
Phvul.006G025800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.3e-54 215.3 110 93.6
Phvul.006G025700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 5.2e-54 214.2 110 92.7
Phvul.006G025840 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.2e-53 213.0 110 92.7
Phvul.006G025880 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.5e-53 212.6 110 92.7
Phvul.006G025500 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.4e-53 211.1 110 92.7
Phvul.006G026040 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.8e-51 205.7 110 89.1
Phvul.006G026300 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.1e-51 204.5 110 87.3
Phvul.006G026100 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.0e-45 185.7 98 88.8
Phvul.006G026000 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 3.5e-42 174.9 91 90.1
VMungo1309G0604 Vigna mungo HOM05D008977 ORTHO05D011276 1.1e-35 153.3 110 67.3
VMungo0540G0820 Vigna mungo HOM05D008977 ORTHO05D011276 4.7e-31 137.9 107 58.9
Phvul.006G026700 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.5e-24 115.5 107 49.5
Phvul.006G026800 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.3e-20 103.2 116 47.4
Glyma.18G113600 Glycine max HOM05D008977 ORTHO05D011276 6.4e-20 100.9 107 43.9
Phvul.006G026900 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.6e-18 96.3 107 44.9
Phvul.006G026600 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.0e-17 93.6 107 43.9
Phvul.007G022400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 4.3e-16 88.2 107 41.1
Glyma.08G304800 Glycine max HOM05D008977 ORTHO05D011276 9.6e-16 87.0 112 44.6
Phvul.006G026200 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 1.6e-15 86.3 112 43.8
VMungo1309G2336 Vigna mungo HOM05D008977 ORTHO05D011276 8.1e-15 84.0 108 42.6
Glyma.18G114600 Glycine max HOM05D008977 ORTHO05D011276 1.1e-14 83.6 113 42.5
Glyma.18G114100 Glycine max HOM05D008977 ORTHO05D011276 1.8e-14 82.8 113 42.5
Glyma.18G114200 Glycine max HOM05D008977 ORTHO05D011276 1.8e-14 82.8 113 42.5
Glyma.18G114300 Glycine max HOM05D008977 ORTHO05D011276 1.8e-14 82.8 113 42.5
Glyma.18G114400 Glycine max HOM05D008977 ORTHO05D011276 2.4e-14 82.4 113 42.5
Glyma.18G114500 Glycine max HOM05D008977 ORTHO05D011276 5.2e-14 81.3 113 42.5
Glyma.08G304900 Glycine max HOM05D008977 ORTHO05D011276 6.9e-14 80.9 108 41.7
Phvul.006G026400 Phaseolus vulgaris HOM05D008977 ORTHO05D011276 2.6e-13 79.0 110 40.9
Glyma.03G026500 Glycine max HOM05D008977 ORTHO05D011276 1.4e-11 73.2 112 39.3
Lalb_Chr12g0203611 Lupinus albus HOM05D006508 ORTHO05D003378 4.2e-11 71.6 82 42.7
Glyma.03G026950 Glycine max HOM05D008977 ORTHO05D011276 7.1e-11 70.9 118 36.4
Glyma.19G169666 Glycine max HOM05D008977 ORTHO05D011276 2.1e-10 69.3 112 40.2
Glyma.19G169633 Glycine max HOM05D008977 ORTHO05D011276 3.5e-10 68.6 110 40.9
Glyma.03G026200 Glycine max HOM05D008977 ORTHO05D011276 6.0e-10 67.8 114 36.0
Lalb_Chr12g0203601 Lupinus albus HOM05D006508 ORTHO05D003378 6.0e-10 67.8 82 39.0
Lalb_Chr12g0203591 Lupinus albus HOM05D006508 ORTHO05D003378 1.0e-09 67.0 82 39.0
Lalb_Chr07g0188461 Lupinus albus HOM05D000275 ORTHO05D003378 2.5e-08 62.4 85 36.5
Lalb_Chr07g0188521 Lupinus albus HOM05D000275 ORTHO05D003378 2.5e-08 62.4 85 36.5
TAR629G2992 Trochodendron aralioides HOM05D006508 ORTHO05D003378 7.3e-08 60.8 80 38.8
Ciclev10018268m.g Citrus clementina HOM05D000275 ORTHO05D003378 2.1e-07 59.3 82 40.2
Nn7g35873 Nelumbo nucifera HOM05D000275 ORTHO05D000181 2.1e-07 59.3 85 32.9
Potri.014G046500 Populus trichocarpa HOM05D000275 ORTHO05D000181 6.2e-07 57.8 106 34.0
TAR626G1122 Trochodendron aralioides HOM05D000275 ORTHO05D003378 1.1e-06 57.0 82 36.6
CiPaw.09G101000 Carya illinoinensis HOM05D000275 ORTHO05D003378 1.4e-06 56.6 80 36.2
PGR044G0303 Punica granatum HOM05D006508 ORTHO05D003378 1.4e-06 56.6 82 30.5
Sopen01g036140 Solanum pennellii HOM05D000275 ORTHO05D000181 1.4e-06 56.6 99 33.3
Actinidia32499 Actinidia chinensis HOM05D000275 ORTHO05D000181 3.1e-06 55.5 84 32.1
Solyc01g090350.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 4.0e-06 55.1 99 33.3
Peaxi162Scf00395g00012 Petunia axillaris HOM05D000275 ORTHO05D010802 6.9e-06 54.3 93 33.3
RcHm_v2.0_Chr5g0001761 Rosa chinensis HOM05D000275 ORTHO05D003378 6.9e-06 54.3 100 34.0
Actinidia29298 Actinidia chinensis HOM05D000275 ORTHO05D010802 9.0e-06 53.9 102 29.4
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 9.0e-06 53.9 112 31.2
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 9.0e-06 53.9 112 31.2
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 9.0e-06 53.9 82 34.1


User provided reference genes

Program Settings