Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.2e-168 596.3 272 100.0
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 4.9e-138 494.6 252 88.5
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.1e-132 476.9 266 85.0
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 2.6e-123 445.7 250 81.6
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 3.4e-123 445.3 248 80.2
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 8.7e-111 404.1 266 71.8
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 7.9e-104 380.9 244 71.3
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 2.3e-103 379.4 269 66.2
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.8e-101 372.5 244 70.1
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 1.0e-98 364.0 242 69.4
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 7.4e-94 347.8 251 64.9
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.4e-92 343.6 246 67.9
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 4.1e-92 342.0 241 66.0
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 2.6e-91 339.3 246 67.1
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 6.5e-90 334.7 241 64.3
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 5.5e-89 331.6 242 65.7
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 3.6e-88 328.9 241 63.5
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.8e-87 326.6 242 62.8
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 3.7e-85 318.9 244 63.1
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.4e-84 317.0 241 61.0
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.4e-84 316.2 246 61.8
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 4.1e-84 315.5 241 63.9
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 2.0e-83 313.2 248 59.7
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 5.9e-83 311.6 247 59.9
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 6.5e-82 308.1 247 59.9
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 8.5e-82 307.8 243 58.0
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 8.5e-82 307.8 240 58.8
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.5e-81 306.2 239 62.3
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 3.2e-81 305.8 241 61.8
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 4.2e-81 305.4 240 58.8
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 4.2e-81 305.4 244 58.6
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 5.5e-81 305.1 237 59.1
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 7.2e-81 304.7 243 58.8
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 9.4e-81 304.3 250 61.2
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.2e-80 303.9 240 59.6
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.6e-80 303.5 241 61.4
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 2.1e-80 303.1 238 60.5
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.7e-80 302.8 239 59.0
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.7e-80 302.8 239 59.0
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.0e-79 300.8 242 59.1
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.0e-79 300.8 241 58.9
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.0e-79 300.8 233 60.1
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.4e-79 300.4 241 61.4
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.4e-79 300.4 260 59.2
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 6.8e-79 298.1 268 54.1
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 8.8e-79 297.7 247 59.1
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 2.0e-78 296.6 250 58.8
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 4.8e-77 292.0 242 57.9
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.1e-76 290.8 189 65.6
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 9.1e-76 287.7 237 57.8
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.6e-75 287.0 242 55.8
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 2.0e-75 286.6 241 56.0
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 1.7e-74 283.5 192 65.6
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 8.5e-74 281.2 230 60.0
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 8.5e-74 281.2 250 55.2
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.5e-73 280.4 243 53.9
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.5e-73 280.4 238 58.8
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 2.5e-73 279.6 224 60.3
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 3.2e-73 279.3 243 58.0
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 7.2e-73 278.1 231 56.7
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 9.4e-73 277.7 214 59.8
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 9.4e-73 277.7 231 55.8
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 1.6e-72 276.9 235 55.3
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 2.1e-72 276.6 241 56.4
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 2.7e-72 276.2 195 65.1
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 3.6e-72 275.8 211 59.7
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 4.7e-72 275.4 191 64.9
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 4.7e-72 275.4 243 56.4
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 8.0e-72 274.6 241 56.4
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.0e-72 274.6 177 72.3
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.0e-72 274.6 177 72.3
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.0e-72 274.6 177 72.3
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.4e-71 273.9 217 60.4
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.4e-71 273.9 177 72.3
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 1.4e-71 273.9 198 60.6
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.8e-71 273.5 194 64.4
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.8e-71 273.5 194 63.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 4.0e-71 272.3 194 63.9
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 8.8e-71 271.2 182 66.5
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.5e-70 270.4 221 56.1
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 5.7e-70 268.5 249 53.4
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 5.7e-70 268.5 242 57.0
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 7.5e-70 268.1 238 54.2
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 1.3e-69 267.3 231 57.6
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 1.3e-69 267.3 235 54.9
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.3e-69 267.3 219 58.9
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 1.7e-69 266.9 231 57.1
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 2.8e-69 266.2 217 59.0
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.8e-69 266.2 237 55.7
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 3.7e-69 265.8 224 55.8
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 3.7e-69 265.8 224 55.8
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 7.7e-67 258.1 227 55.1
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 7.7e-67 258.1 198 63.1
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.0e-66 257.7 172 66.3
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.0e-66 257.7 172 66.3
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.0e-66 257.7 262 49.2
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 5.0e-66 255.4 208 61.1
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 1.5e-65 253.8 144 75.7
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.0e-63 247.7 221 56.1
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 6.8e-63 245.0 201 56.7
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.6e-62 243.0 221 55.2
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 5.7e-62 241.9 207 56.0
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 4.9e-61 238.8 231 51.9
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 3.2e-60 236.1 144 72.2
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.0e-58 229.6 122 77.0
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.5e-57 227.3 160 62.5
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 3.3e-57 226.1 202 56.9
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.3e-57 226.1 202 56.9
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.1e-56 223.4 131 74.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.5e-54 217.2 139 67.6
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 7.8e-51 204.9 132 64.4
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 1.2e-46 191.0 145 59.3
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.6e-43 180.6 235 43.8
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 5.2e-39 165.6 118 60.2
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.3e-34 151.0 119 54.6
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 3.0e-34 149.8 128 52.3
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 5.6e-33 145.6 84 66.7
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 9.9e-30 134.8 81 70.4
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 4.2e-28 129.4 102 52.9
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 6.9e-15 85.5 182 34.6
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 4.5e-06 56.2 106 36.8


User provided reference genes

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