Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.7e-93 345.9 161 100.0
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.0e-91 339.0 161 98.1
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.2e-87 324.3 161 93.8
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.2e-87 324.3 161 93.8
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.0e-83 312.4 161 90.1
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 4.6e-83 311.2 161 88.8
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.1e-81 306.6 161 88.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.5e-81 306.2 161 87.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.5e-81 306.2 160 85.0
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 4.0e-79 298.1 161 85.1
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.5e-78 296.2 161 84.5
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.0e-78 295.8 160 85.6
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.0e-78 295.8 158 85.4
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 9.9e-78 293.5 161 84.5
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 9.9e-78 293.5 161 83.2
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.3e-77 293.1 157 85.4
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.3e-77 293.1 161 84.5
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.3e-77 293.1 160 83.1
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.3e-77 293.1 161 85.1
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.3e-77 293.1 161 83.2
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.2e-77 292.4 158 84.8
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 4.9e-77 291.2 160 84.4
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.9e-77 291.2 160 84.4
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.9e-77 291.2 160 84.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 6.4e-77 290.8 160 83.8
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 6.4e-77 290.8 161 83.2
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 8.3e-77 290.4 158 84.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 8.3e-77 290.4 161 83.9
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 8.3e-77 290.4 161 81.4
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.4e-76 289.7 157 84.7
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.9e-76 289.3 162 84.0
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 2.4e-76 288.9 152 88.2
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.2e-76 288.5 153 86.3
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 5.4e-76 287.7 159 84.3
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 5.4e-76 287.7 159 84.3
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.2e-75 286.6 161 82.0
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.6e-75 286.2 161 80.7
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.6e-75 286.2 161 80.7
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.6e-75 286.2 161 80.7
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 159 83.6
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 158 81.0
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.7e-75 285.4 160 81.9
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.7e-75 285.4 154 85.7
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 81.4
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 4.6e-75 284.6 158 81.6
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 4.6e-75 284.6 161 81.4
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 81.0
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.0e-74 283.5 154 86.4
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.3e-74 282.3 158 81.0
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 79.5
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 80.7
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.9e-74 281.6 154 81.2
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 6.6e-74 280.8 157 81.5
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.5e-73 279.6 161 78.3
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.5e-73 279.6 161 78.3
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.5e-73 279.6 155 80.0
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 3.3e-73 278.5 155 80.0
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 3.3e-73 278.5 162 79.6
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 78.9
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 9.5e-73 276.9 161 78.3
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 76.4
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 77.6
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 77.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.6e-72 276.2 151 84.8
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 75.8
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 77.0
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 4.7e-72 274.6 161 76.4
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 4.7e-72 274.6 162 79.6
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 4.7e-72 274.6 157 81.5
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 4.7e-72 274.6 161 77.0
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 75.8
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 77.6
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 77.0
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.8e-71 272.7 161 75.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 77.0
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 74.5
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 1.2e-70 270.0 161 75.2
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 4.4e-70 268.1 169 73.4
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 5.8e-70 267.7 161 78.3
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.3e-69 266.5 159 74.8
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.7e-69 266.2 166 73.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.7e-69 266.2 158 77.2
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 3.8e-69 265.0 160 76.9
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 8.4e-69 263.8 152 77.0
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 8.4e-69 263.8 162 76.5
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.4e-68 262.3 148 84.5
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.2e-67 260.0 161 78.3
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.1e-67 259.2 153 75.8
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 2.1e-67 259.2 214 58.9
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 1.7e-66 256.1 162 73.5
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.3e-66 255.8 153 74.5
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 5.1e-66 254.6 161 75.8
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 2.5e-65 252.3 153 73.9
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.2e-64 250.0 135 83.7
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.2e-64 250.0 158 70.9
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.4e-63 245.7 152 72.4
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 4.0e-63 245.0 157 68.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 5.2e-63 244.6 135 80.7
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.4e-62 241.5 135 78.5
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 4.4e-62 241.5 135 83.0
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 5.8e-62 241.1 140 78.6
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.1e-60 236.9 152 75.0
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 1.0e-58 230.3 138 74.6
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.3e-58 229.9 116 89.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 3.3e-57 225.3 121 84.3
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 5.3e-55 218.0 183 60.1
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 5.3e-55 218.0 114 85.1
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.4e-53 210.7 157 67.5
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 7.1e-52 207.6 154 59.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.2e-51 206.8 114 80.7
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.6e-51 204.9 121 78.5
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 6.0e-51 204.5 154 59.1
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.0e-50 203.8 116 80.2
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.0e-50 203.8 154 59.1
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.3e-49 198.7 114 79.8
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 2.8e-48 195.7 158 62.0
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.4e-44 183.3 132 65.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.6e-43 179.9 96 80.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 6.0e-43 177.9 95 83.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 3.3e-41 172.2 102 71.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.3e-37 160.2 139 60.4
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 3.8e-37 158.7 157 55.4
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.8e-37 158.7 85 84.7
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 4.9e-37 158.3 171 48.5
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.4e-36 156.8 86 82.6
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.2e-27 127.1 73 80.8
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 4.2e-20 102.1 52 86.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.0e-13 80.9 60 65.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 5.9e-06 55.1 71 42.3


User provided reference genes

Program Settings