Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 7.7e-112 407.1 204 100.0
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.9e-94 349.4 204 86.8
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 8.1e-85 317.4 197 78.2
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 4.9e-82 308.1 197 74.1
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 7.1e-81 304.3 194 75.3
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.2e-80 303.5 197 75.6
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 2.1e-80 302.8 197 74.1
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 3.5e-80 302.0 197 75.1
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 2.3e-79 299.3 202 70.3
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 6.6e-79 297.7 195 71.8
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 6.8e-76 287.7 200 70.5
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.2e-75 287.0 199 69.8
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 2.6e-75 285.8 197 69.5
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 3.4e-75 285.4 194 69.6
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 3.4e-75 285.4 197 69.5
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 3.4e-75 285.4 192 71.4
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 5.8e-75 284.6 194 70.1
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 7.6e-75 284.3 190 71.6
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.3e-74 283.5 194 69.6
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.7e-74 283.1 194 70.6
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.7e-74 283.1 193 71.0
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 2.2e-74 282.7 194 71.1
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 2.9e-74 282.3 186 72.0
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 4.9e-74 281.6 194 70.1
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 8.4e-74 280.8 194 70.1
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.1e-73 280.4 193 71.5
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.4e-73 279.3 194 69.1
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 2.4e-73 279.3 194 69.1
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 3.2e-73 278.9 192 70.8
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 3.2e-73 278.9 202 68.8
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 3.2e-73 278.9 194 69.1
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 4.2e-73 278.5 193 68.4
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.6e-72 276.6 194 68.6
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.1e-72 276.2 182 73.6
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 4.6e-72 275.0 194 68.6
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 4.6e-72 275.0 178 74.2
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 4.6e-72 275.0 195 68.7
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 2.3e-71 272.7 194 68.0
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 3.0e-71 272.3 193 65.8
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 3.9e-71 271.9 192 67.7
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 5.1e-71 271.6 193 66.3
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 8.7e-71 270.8 193 66.8
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 1.5e-70 270.0 185 69.7
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 3.3e-70 268.9 197 66.5
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 4.3e-70 268.5 194 68.0
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 5.6e-70 268.1 194 66.5
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 7.3e-70 267.7 194 67.0
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.3e-69 266.9 194 64.4
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.3e-69 266.9 190 67.9
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.6e-69 266.5 193 66.8
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 2.1e-69 266.2 184 71.2
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 2.8e-69 265.8 192 66.1
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 3.6e-69 265.4 197 65.0
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 6.2e-69 264.6 193 64.2
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 8.1e-69 264.2 186 68.3
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 8.1e-69 264.2 172 74.4
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.1e-68 263.8 193 65.8
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.8e-68 263.1 193 64.2
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.1e-68 262.3 192 65.6
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 3.1e-68 262.3 169 72.8
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 4.0e-68 261.9 185 66.5
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 6.9e-68 261.2 193 63.7
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 6.9e-68 261.2 203 60.1
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 2.0e-67 259.6 323 45.8
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 2.0e-67 259.6 323 45.8
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 5.8e-67 258.1 180 68.3
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.2e-64 250.4 202 63.9
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 6.0e-64 248.1 208 64.4
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 3.0e-63 245.7 189 63.5
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 3.0e-63 245.7 178 65.2
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 3.0e-63 245.7 268 51.9
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 5.1e-63 245.0 174 67.2
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 6.6e-63 244.6 154 74.7
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.9e-62 243.0 182 62.6
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.1e-60 237.3 148 74.3
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.4e-59 232.3 170 67.6
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.4e-59 232.3 255 49.0
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.9e-58 229.2 203 59.6
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 2.4e-57 226.1 143 74.8
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.4e-57 226.1 342 39.8
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 5.5e-57 224.9 176 62.5
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 5.1e-55 218.4 168 63.7
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.3e-53 213.8 170 62.4
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 8.1e-53 211.1 194 57.2
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 9.0e-52 207.6 158 59.5
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 3.4e-51 205.7 170 57.1
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.5e-46 189.5 197 50.8
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.3e-45 187.2 110 77.3
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 2.1e-45 186.4 170 54.1
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 3.7e-45 185.7 121 75.2
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 6.9e-44 181.4 136 66.2
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 2.6e-43 179.5 136 62.5
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 4.5e-43 178.7 136 61.8
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.9e-41 173.3 136 61.0
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 6.7e-39 164.9 178 48.3
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 3.7e-37 159.1 272 35.3
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 2.7e-32 142.9 239 41.8
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 4.3e-30 135.6 115 58.3
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 2.4e-28 129.8 82 68.3
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 5.0e-26 122.1 94 66.0
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 3.5e-19 99.4 143 42.0
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.5e-19 99.0 85 62.4
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.2e-16 90.9 114 48.2
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 6.1e-16 88.6 164 35.4
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 6.7e-15 85.1 58 67.2
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 1.5e-14 84.0 62 64.5
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 1.2e-08 64.3 115 37.4
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.6e-08 63.9 41 68.3
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 1.2e-06 57.8 49 55.1
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-06 57.4 34 73.5


User provided reference genes

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