Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G003100 Phaseolus vulgaris HOM05D000855 ORTHO05D008469 1.2e-153 546.6 293 100.0
Glyma.13G004800 Glycine max HOM05D000855 ORTHO05D008469 4.6e-33 146.0 184 54.9
Glyma.20G064400 Glycine max HOM05D000855 ORTHO05D008469 9.6e-31 138.3 229 47.6
Lalb_Chr17g0337151 Lupinus albus HOM05D000855 ORTHO05D008469 5.5e-18 95.9 209 39.2
Ca_16318_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008469 1.2e-17 94.7 63 71.4
Phvul.006G003000 Phaseolus vulgaris HOM05D000855 ORTHO05D008469 1.6e-17 94.4 189 42.3
VMungo0540G2109 Vigna mungo HOM05D000855 ORTHO05D008469 1.4e-16 91.3 257 36.2
Psat5g106400 Pisum sativum HOM05D000855 ORTHO05D008469 5.3e-13 79.3 67 61.2
Lj6g0003093 Lotus japonicus HOM05D000855 ORTHO05D008469 1.3e-11 74.7 173 39.3
Ciclev10018990m.g Citrus clementina HOM05D000855 ORTHO05D008469 6.5e-11 72.4 62 56.5
Glyma.20G063400 Glycine max HOM05D029517 ORTHO05D008469 9.4e-10 68.6 46 73.9
Glyma.20G063501 Glycine max HOM05D029517 ORTHO05D008469 9.4e-10 68.6 46 73.9
arahy.Tifrunner.gnm1.ann1.EM0BSF Arachis hypogaea HOM05D000855 ORTHO05D008469 1.6e-09 67.8 51 62.7
arahy.Tifrunner.gnm1.ann1.EQ53NA Arachis hypogaea HOM05D000855 ORTHO05D008469 1.6e-09 67.8 51 62.7
Atru.chr9.2483 Acer truncatum HOM05D000855 ORTHO05D008469 2.1e-09 67.4 61 54.1
arahy.Tifrunner.gnm1.ann1.TBA5Q4 Arachis hypogaea HOM05D000855 ORTHO05D008469 3.6e-09 66.6 51 60.8
TPR.G8286 Trifolium pratense HOM05D000855 ORTHO05D008469 3.6e-09 66.6 141 34.8
Glyma.20G063700 Glycine max HOM05D029517 ORTHO05D008469 4.7e-09 66.2 46 71.7
Sabra15G0102000 Salix brachista HOM05D002152 ORTHO05D002737 1.0e-08 65.1 61 55.7
FAN11G2252 Fragaria x ananassa HOM05D000855 ORTHO05D008469 2.3e-08 63.9 62 51.6
Manes.06G105300 Manihot esculenta HOM05D000855 ORTHO05D008469 3.0e-08 63.5 50 62.0
Potri.012G081500 Populus trichocarpa HOM05D000855 ORTHO05D008469 5.1e-08 62.8 61 54.1
Eucgr.B00304 Eucalyptus grandis HOM05D000855 ORTHO05D008469 6.7e-08 62.4 60 53.3
FAN16G3561 Fragaria x ananassa HOM05D000855 ORTHO05D008469 6.7e-08 62.4 60 51.7
FAN21G0403 Fragaria x ananassa HOM05D000855 ORTHO05D008469 6.7e-08 62.4 60 51.7
FAN25G0827 Fragaria x ananassa HOM05D000855 ORTHO05D008469 6.7e-08 62.4 60 51.7
Manes.14G065400 Manihot esculenta HOM05D000855 ORTHO05D008469 8.8e-08 62.0 61 54.1
RcHm_v2.0_Chr7g0223481 Rosa chinensis HOM05D000855 ORTHO05D008469 1.1e-07 61.6 60 51.7
QL10p011511 Quercus lobata HOM05D000855 ORTHO05D008469 2.0e-07 60.8 170 29.4
GSVIVG01007736001 Vitis vinifera HOM05D000855 ORTHO05D008469 2.6e-07 60.5 75 46.7
RcHm_v2.0_Chr7g0223491 Rosa chinensis HOM05D000855 ORTHO05D008469 3.3e-07 60.1 60 50.0
Sabra12G0058300 Salix brachista HOM05D000855 ORTHO05D008469 3.3e-07 60.1 61 52.5
Duzib106G2025 Durio zibethinus HOM05D000855 ORTHO05D008469 4.4e-07 59.7 69 44.9
ECA246G2551 Erigeron canadensis HOM05D000855 ORTHO05D008469 4.4e-07 59.7 45 62.2
Cpa.g.c30444 Carica papaya HOM05D000855 ORTHO05D008469 5.7e-07 59.3 108 35.2
Haze_07505 Corylus avellana HOM05D000855 ORTHO05D008469 5.7e-07 59.3 77 42.9
Thecc.10G121100 Theobroma cacao HOM05D000855 ORTHO05D008469 5.7e-07 59.3 61 49.2
FvH4_3g28680 Fragaria vesca HOM05D000855 ORTHO05D008469 7.4e-07 58.9 57 50.9
Medtr3g081560 Medicago truncatula HOM05D000855 ORTHO05D008469 9.7e-07 58.5 42 66.7
MD06G1173400 Malus domestica HOM05D000855 ORTHO05D008469 1.7e-06 57.8 48 58.3
CsaV3_1G008500 Cucumis sativus L. HOM05D000855 ORTHO05D008469 2.2e-06 57.4 62 46.8
Prupe.5G172900 Prunus persica HOM05D000855 ORTHO05D008469 2.8e-06 57.0 54 53.7
Aqoxy3G02940 Aquilegia oxysepala HOM05D000855 ORTHO05D008469 3.7e-06 56.6 127 33.1
DCAR_031321 Daucus carota HOM05D000855 ORTHO05D008469 3.7e-06 56.6 45 55.6
COL.COLO4_21664 Corchorus olitorius HOM05D000855 ORTHO05D008469 4.8e-06 56.2 45 55.6
MELO3C002265.2 Cucumis melo HOM05D000855 ORTHO05D008469 4.8e-06 56.2 63 44.4
Gohir.A06G170100 Gossypium hirsutum HOM05D000855 ORTHO05D008469 4.8e-06 56.2 59 49.2
Gorai.N007400 Gossypium raimondii HOM05D000855 ORTHO05D008469 4.8e-06 56.2 59 49.2
Sed0024227 Sechium edule HOM05D000855 ORTHO05D008469 4.8e-06 56.2 72 40.3
TWI23G1303 Tripterygium wilfordii HOM05D000855 ORTHO05D008469 4.8e-06 56.2 61 47.5
Actinidia19324 Actinidia chinensis HOM05D000855 ORTHO05D008469 6.3e-06 55.8 45 57.8
Gohir.D06G177900 Gossypium hirsutum HOM05D000855 ORTHO05D008469 6.3e-06 55.8 59 49.2
ClCG01G013160 Citrullus lanatus HOM05D000855 ORTHO05D008469 8.2e-06 55.5 59 47.5
MD14G1179900 Malus domestica HOM05D000855 ORTHO05D008469 8.2e-06 55.5 64 50.0


User provided reference genes

Program Settings