Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 5.3e-266 920.6 521 100.0
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 6.8e-229 797.3 542 88.6
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 4.2e-202 708.4 532 81.0
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 2.7e-193 679.1 535 78.1
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 5.1e-192 674.9 527 78.9
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 1.1e-189 667.2 519 78.8
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 3.1e-189 665.6 519 78.6
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 7.4e-175 617.8 527 73.6
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 1.5e-172 610.1 551 69.7
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 6.1e-169 598.2 546 70.7
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 3.7e-166 589.0 566 68.0
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 6.3e-166 588.2 554 67.9
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 4.1e-165 585.5 527 69.1
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 6.5e-163 578.2 531 70.6
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 1.4e-162 577.0 543 68.1
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 3.2e-162 575.9 555 66.7
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 7.2e-162 574.7 490 74.3
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 7.2e-162 574.7 543 67.6
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 1.2e-161 573.9 560 66.6
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 1.6e-161 573.5 543 65.7
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 3.9e-160 568.9 534 65.5
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 2.5e-159 566.2 546 65.9
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 8.2e-158 561.2 529 66.9
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 1.1e-157 560.8 437 81.0
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 5.3e-157 558.5 544 67.1
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 2.0e-156 556.6 548 67.3
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 2.5e-154 549.7 546 66.3
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 5.5e-154 548.5 535 64.1
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 1.2e-153 547.4 543 64.6
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 1.6e-153 547.0 550 64.4
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 2.1e-153 546.6 427 78.5
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 6.7e-152 541.6 524 67.4
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 2.6e-151 539.7 544 65.1
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.3e-150 537.3 531 66.1
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.1e-149 534.3 531 64.6
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 5.9e-148 528.5 555 61.1
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.3e-147 527.3 559 62.3
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.3e-147 527.3 530 66.6
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.9e-146 523.5 640 54.7
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 2.7e-145 519.6 531 63.5
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 5.2e-144 515.4 529 64.5
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 1.1e-143 514.2 487 68.4
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 2.0e-143 513.5 502 64.5
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 5.7e-143 511.9 539 63.6
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 6.3e-142 508.4 544 61.9
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 6.3e-142 508.4 525 65.0
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 3.1e-141 506.1 545 61.5
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 3.1e-141 506.1 547 63.8
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 7.0e-141 505.0 548 63.7
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 4.5e-140 502.3 557 60.7
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 1.0e-139 501.1 553 63.1
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.3e-139 500.7 490 65.1
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 5.0e-139 498.8 561 61.3
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 4.2e-138 495.7 533 63.0
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.7e-137 493.0 566 59.5
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 9.7e-135 484.6 489 66.1
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 2.4e-133 479.9 548 60.2
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 3.1e-133 479.6 498 61.4
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 5.3e-133 478.8 569 57.1
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 1.6e-132 477.2 540 59.3
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 7.7e-132 474.9 471 65.6
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 1.7e-131 473.8 503 62.4
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 9.4e-130 468.0 456 67.5
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 3.6e-129 466.1 524 61.8
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 3.6e-129 466.1 500 64.6
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 4.7e-129 465.7 554 57.0
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 6.8e-128 461.8 575 54.4
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 5.7e-127 458.8 530 60.9
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 3.7e-126 456.1 516 57.9
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 6.3e-126 455.3 505 57.2
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.4e-125 454.1 487 62.4
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 6.6e-123 445.3 571 55.7
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 1.1e-122 444.5 542 57.9
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 5.5e-122 442.2 539 56.8
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.2e-121 441.0 525 55.0
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 1.4e-120 437.6 531 57.4
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 3.0e-120 436.4 540 55.7
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 3.0e-120 436.4 520 54.4
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 2.0e-119 433.7 459 63.0
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 7.5e-119 431.8 528 53.8
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 1.8e-117 427.2 556 53.1
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 1.2e-116 424.5 537 53.6
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 2.0e-116 423.7 562 54.8
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 3.9e-115 419.5 576 53.6
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 1.1e-114 417.9 534 53.0
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 2.5e-114 416.8 545 55.6
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 4.7e-113 412.5 548 51.8
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 2.0e-111 407.1 510 56.7
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 3.7e-110 402.9 531 54.2
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 7.8e-108 395.2 375 69.9
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 5.0e-107 392.5 534 54.7
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 6.6e-107 392.1 547 48.8
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 5.6e-106 389.0 538 54.6
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 7.3e-106 388.7 534 52.4
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 1.2e-105 387.9 481 57.2
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 6.2e-105 385.6 534 52.2
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 6.2e-105 385.6 534 52.2
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 6.8e-104 382.1 430 61.2
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 6.4e-102 375.6 476 53.2
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.9e-101 374.0 361 67.0
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 3.9e-99 366.3 363 63.6
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 3.5e-84 316.6 196 84.2
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 1.2e-79 301.6 196 79.1
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 3.2e-77 293.5 193 81.9
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 9.0e-72 275.4 239 62.8
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 5.8e-71 272.7 485 48.5
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 5.1e-67 259.6 357 58.8
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 1.3e-65 255.0 211 64.9
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 3.7e-65 253.4 211 63.5
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 8.1e-65 252.3 211 64.5
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 4.0e-64 250.0 211 64.0
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 5.5e-61 239.6 332 47.0
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 8.7e-59 232.3 242 54.5
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 6.2e-57 226.1 173 74.0
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 2.5e-50 204.1 216 52.8
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 1.7e-46 191.4 211 55.0
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 3.8e-46 190.3 572 35.5
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 1.8e-43 181.4 209 47.8
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 3.3e-42 177.2 201 49.3
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 1.5e-39 168.3 288 39.6
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 5.9e-39 166.4 182 58.8
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 3.8e-38 163.7 212 45.3
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 1.9e-37 161.4 148 68.9
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 4.7e-36 156.8 139 67.6
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 7.0e-32 142.9 108 73.1
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 3.5e-31 140.6 202 48.5
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 4.5e-31 140.2 185 50.3
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.6e-28 131.7 148 53.4
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 1.7e-22 111.7 66 77.3
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 1.6e-20 105.1 103 63.1
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 8.0e-20 102.8 71 77.5
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 8.0e-20 102.8 91 58.2
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 3.7e-17 94.0 100 58.0
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 2.4e-16 91.3 90 61.1
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 2.4e-16 91.3 135 44.4
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 2.0e-15 88.2 152 40.8
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 3.8e-14 84.0 81 60.5
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 3.8e-14 84.0 176 42.0
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 8.5e-14 82.8 103 54.4
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 8.5e-14 82.8 134 53.7
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 1.2e-12 79.0 46 78.3
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 8.0e-12 76.3 71 62.0
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 5.2e-11 73.6 64 64.1
Haze_16261 Corylus avellana HOM05D004479 ORTHO05D029161 8.8e-11 72.8 68 66.2
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 1.5e-10 72.0 44 77.3
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 2.6e-10 71.2 40 85.0
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 3.4e-10 70.9 39 87.2
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 3.4e-10 70.9 39 87.2
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 3.4e-10 70.9 39 87.2
Nitab4.5_0005739g0060 Nicotiana tabacum HOM05D004479 ORTHO05D029161 1.3e-09 68.9 98 51.0
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 4.9e-09 67.0 117 39.3
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 4.9e-09 67.0 115 40.0
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 2.4e-08 64.7 109 39.4
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 2.4e-08 64.7 252 28.2
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 5.4e-08 63.5 86 51.2
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 5.4e-08 63.5 86 51.2
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 5.4e-08 63.5 86 51.2
Lj5C22T9 Lonicera japonica HOM05D004479 ORTHO05D029161 5.4e-08 63.5 69 66.7
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 1.2e-07 62.4 64 60.9
SHI13126 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-07 61.6 42 71.4
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 7.7e-07 59.7 46 67.4
Cpa.g.sc1515.1 Carica papaya HOM05D004479 ORTHO05D005597 3.8e-06 57.4 107 59.8
SHI36675 Sapria himalayana HOM05D004479 ORTHO05D005597 5.0e-06 57.0 54 59.3
COL.COLO4_18371 Corchorus olitorius HOM05D004479 ORTHO05D005597 6.6e-06 56.6 63 50.8


User provided reference genes

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