Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 2.6e-62 241.9 124 100.0
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 1.2e-46 189.9 124 81.5
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 3.0e-34 148.7 123 67.5
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 1.5e-33 146.4 138 61.6
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 2.1e-27 125.9 131 54.2
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 2.1e-27 125.9 131 54.2
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 6.3e-24 114.4 129 55.8
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 6.5e-21 104.4 88 67.0
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 1.8e-18 96.3 112 52.7
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 6.8e-18 94.4 116 50.0
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.0e-17 92.8 127 45.7
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.6e-17 92.4 124 46.8
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 4.4e-17 91.7 127 44.9
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 7.5e-17 90.9 118 48.3
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 6.3e-16 87.8 98 50.0
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 8.3e-16 87.4 105 47.6
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.4e-15 86.7 105 47.6
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 2.4e-15 85.9 63 66.7
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 4.5e-14 81.6 103 49.5
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 5.9e-14 81.3 75 61.3
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 5.9e-14 81.3 106 46.2
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 1.3e-13 80.1 141 43.3
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.3e-13 80.1 106 49.1
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 1.7e-13 79.7 111 44.1
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 1.7e-13 79.7 85 58.8
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 3.8e-13 78.6 101 49.5
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 5.0e-13 78.2 99 49.5
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 8.5e-13 77.4 107 44.9
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 1.1e-12 77.0 86 51.2
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 1.5e-12 76.6 81 51.9
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.9e-12 76.3 99 48.5
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 2.5e-12 75.9 128 42.2
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.5e-12 75.9 95 49.5
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 2.5e-12 75.9 99 45.5
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 2.5e-12 75.9 101 43.6
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 4.2e-12 75.1 89 49.4
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 4.2e-12 75.1 95 48.4
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 5.5e-12 74.7 112 45.5
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 5.5e-12 74.7 66 63.6
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 5.5e-12 74.7 108 42.6
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 7.2e-12 74.3 106 44.3
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 7.2e-12 74.3 108 44.4
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 9.4e-12 73.9 109 40.4
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 1.2e-11 73.6 128 37.5
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 1.2e-11 73.6 72 52.8
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 1.2e-11 73.6 100 48.0
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 1.2e-11 73.6 111 44.1
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 1.6e-11 73.2 112 43.8
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 2.1e-11 72.8 84 51.2
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 3.6e-11 72.0 73 56.2
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 3.6e-11 72.0 70 52.9
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 3.6e-11 72.0 89 50.6
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 4.7e-11 71.6 97 44.3
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 4.7e-11 71.6 60 63.3
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 6.1e-11 71.2 67 59.7
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 6.1e-11 71.2 62 59.7
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 6.1e-11 71.2 66 56.1
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 8.0e-11 70.9 88 50.0
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 8.0e-11 70.9 74 55.4
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 8.0e-11 70.9 56 62.5
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 1.0e-10 70.5 85 50.6
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 1.0e-10 70.5 88 48.9
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 1.0e-10 70.5 67 58.2
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 1.4e-10 70.1 67 55.2
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 1.4e-10 70.1 96 47.9
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 1.8e-10 69.7 111 41.4
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 5.2e-10 68.2 116 37.1
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 5.2e-10 68.2 73 47.9
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 5.2e-10 68.2 63 61.9
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 8.8e-10 67.4 77 49.4
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 8.8e-10 67.4 62 54.8
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 1.5e-09 66.6 89 42.7
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 2.0e-09 66.2 66 51.5
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 2.0e-09 66.2 57 59.6
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 4.4e-09 65.1 67 52.2
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 4.4e-09 65.1 67 52.2
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 4.4e-09 65.1 60 58.3
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 5.7e-09 64.7 67 52.2
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 5.7e-09 64.7 67 52.2
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 5.7e-09 64.7 67 52.2
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 7.5e-09 64.3 73 49.3
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 9.8e-09 63.9 73 43.8
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 1.3e-08 63.5 105 39.0
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 2.2e-08 62.8 64 54.7
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 2.8e-08 62.4 68 51.5
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 2.8e-08 62.4 72 52.8
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 4.9e-08 61.6 58 60.3
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 4.9e-08 61.6 66 50.0
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 6.3e-08 61.2 64 53.1
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 8.3e-08 60.8 55 61.8
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 1.1e-07 60.5 85 45.9
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 4.1e-07 58.5 58 60.3
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 9.2e-07 57.4 62 50.0
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.6e-06 56.6 46 67.4


User provided reference genes

Program Settings