Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G175200 Phaseolus vulgaris HOM05D014786 ORTHO05D016942 1.6e-104 382.9 204 100.0
VMungo1080G1077 Vigna mungo HOM05D014786 ORTHO05D016942 6.0e-64 248.1 198 77.3
Glyma.13G363600 Glycine max HOM05D014786 ORTHO05D016942 1.4e-41 173.7 168 61.3
Psat5g301040 Pisum sativum HOM05D014786 ORTHO05D016942 2.6e-27 126.3 218 35.8
TPR.G37276 Trifolium pratense HOM05D014786 ORTHO05D016942 2.0e-19 100.1 165 36.4
Medtr2g103290 Medicago truncatula HOM05D014786 ORTHO05D016942 1.1e-17 94.4 175 34.3
Lj3g0018209 Lotus japonicus HOM05D014786 ORTHO05D016942 6.1e-16 88.6 160 39.4
Lalb_Chr24g0395591 Lupinus albus HOM05D014786 ORTHO05D016942 5.2e-15 85.5 105 43.8
AUR62033468 Chenopodium quinoa HOM05D001781 ORTHO05D001711 2.2e-13 80.1 197 29.9
Glyma.15G010200 Glycine max HOM05D014786 ORTHO05D016942 9.1e-12 74.7 165 40.6
Potri.003G061600 Populus trichocarpa HOM05D001781 ORTHO05D001711 2.7e-11 73.2 201 31.8
Manes.11G052900 Manihot esculenta HOM05D001781 ORTHO05D001711 5.9e-11 72.0 197 26.4
Sabra03G0035700 Salix brachista HOM05D001781 ORTHO05D001711 1.7e-10 70.5 209 30.6
Ca_01083_v3 Cicer arietinum L. HOM05D014786 ORTHO05D016942 5.0e-10 68.9 165 34.5
AUR62011086 Chenopodium quinoa HOM05D001781 ORTHO05D001711 3.2e-09 66.2 233 25.8
GSVIVG01017255001 Vitis vinifera HOM05D001781 ORTHO05D001711 9.4e-09 64.7 235 24.7
Prupe.3G080200 Prunus persica HOM05D001781 ORTHO05D001711 1.6e-08 63.9 187 25.1
Oeu063806.2 Olea europaea HOM05D001781 ORTHO05D001711 2.1e-08 63.5 235 28.5
Prupe.3G080700 Prunus persica HOM05D001781 ORTHO05D001711 2.7e-08 63.2 185 23.8
Duzib187G1560 Durio zibethinus HOM05D001781 ORTHO05D001711 5.2e-07 58.9 89 30.3
SGA_v2.0_scaffold5G02658 Striga asiatica HOM05D001781 ORTHO05D001711 5.2e-07 58.9 71 38.0
CsaV3_2G002700 Cucumis sativus L. HOM05D001781 ORTHO05D001711 6.8e-07 58.5 87 29.9
Aqoxy7G02095 Aquilegia oxysepala HOM05D001781 ORTHO05D001711 8.8e-07 58.2 85 32.9
COL.COLO4_05760 Corchorus olitorius HOM05D001781 ORTHO05D001711 1.2e-06 57.8 255 24.3
Cpa.g.c41482 Carica papaya HOM05D001781 ORTHO05D001711 1.5e-06 57.4 88 30.7
Cpa.g.sc75.57 Carica papaya HOM05D001781 ORTHO05D001711 1.5e-06 57.4 88 30.7
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 1.5e-06 57.4 88 28.4
Nn8g39386 Nelumbo nucifera HOM05D001781 ORTHO05D001711 1.5e-06 57.4 88 29.5
Sed0007229 Sechium edule HOM05D001781 ORTHO05D001711 1.5e-06 57.4 88 29.5
Duzib168G2385 Durio zibethinus HOM05D001781 ORTHO05D001711 2.0e-06 57.0 87 29.9
Sed0027740 Sechium edule HOM05D001781 ORTHO05D001711 2.0e-06 57.0 87 29.9
THA.LOC104826540 Tarenaya hassleriana HOM05D001781 ORTHO05D001711 2.0e-06 57.0 286 23.1
Thecc.09G122900 Theobroma cacao HOM05D001781 ORTHO05D001711 2.0e-06 57.0 87 29.9
TWI34G1451 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 2.0e-06 57.0 91 28.6
MD17G1205200 Malus domestica HOM05D001781 ORTHO05D001711 2.6e-06 56.6 189 25.9
Nitab4.5_0006574g0060 Nicotiana tabacum HOM05D001781 ORTHO05D001711 2.6e-06 56.6 177 28.2
AL3G32760 Arabidopsis lyrata HOM05D001781 ORTHO05D001711 3.4e-06 56.2 273 23.1
Ciclev10008851m.g Citrus clementina HOM05D001781 ORTHO05D001711 3.4e-06 56.2 90 28.9
MD17G1204700 Malus domestica HOM05D001781 ORTHO05D001711 3.4e-06 56.2 189 25.4
Prupe.7G239500 Prunus persica HOM05D001781 ORTHO05D001711 3.4e-06 56.2 89 29.2
RcHm_v2.0_Chr2g0089141 Rosa chinensis HOM05D001781 ORTHO05D001711 3.4e-06 56.2 88 29.5
Gohir.D07G038700 Gossypium hirsutum HOM05D001781 ORTHO05D001711 4.4e-06 55.8 87 28.7
Gorai.001G040700 Gossypium raimondii HOM05D001781 ORTHO05D001711 4.4e-06 55.8 87 28.7
PGR044G0682 Punica granatum HOM05D001781 ORTHO05D001711 4.4e-06 55.8 88 27.3
TWI63G0260 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 4.4e-06 55.8 90 27.8
CANSAT11G0594 Cannabis sativa HOM05D001781 ORTHO05D001711 7.5e-06 55.1 120 25.8
Eucgr.C04180 Eucalyptus grandis HOM05D001781 ORTHO05D001711 7.5e-06 55.1 88 28.4
Manes.14G130400 Manihot esculenta HOM05D001781 ORTHO05D001711 7.5e-06 55.1 90 28.9
ClCG11G002860 Citrullus lanatus HOM05D001781 ORTHO05D001711 9.8e-06 54.7 243 23.9
PSO170G3589 Papaver somniferum HOM05D001781 ORTHO05D001711 9.8e-06 54.7 86 29.1


User provided reference genes

Program Settings