Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 0.0e+00 1604.3 922 100.0
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.9e-250 869.8 922 58.9
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 1.6e-241 840.1 963 57.4
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 6.0e-236 821.6 959 53.5
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 2.8e-145 520.4 933 41.5
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 2.2e-142 510.8 923 42.4
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 2.5e-141 507.3 953 39.9
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 4.0e-139 500.0 992 39.9
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 4.5e-135 486.5 975 39.6
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 2.0e-130 471.1 945 39.3
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 1.7e-126 458.0 940 37.6
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 1.0e-118 432.2 864 38.4
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 5.0e-118 429.9 896 40.0
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 1.2e-103 382.1 884 38.8
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 4.3e-101 373.6 884 39.1
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 9.6e-93 345.9 548 44.5
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 7.6e-90 336.3 933 33.1
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 6.6e-86 323.2 983 32.3
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 3.1e-83 314.3 980 31.2
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 6.2e-76 290.0 927 30.4
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 9.0e-75 286.2 924 30.7
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.5e-69 268.9 951 32.2
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 3.1e-67 261.2 966 28.5
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 5.3e-67 260.4 941 32.0
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 9.0e-67 259.6 385 43.6
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.0e-65 256.1 962 30.4
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.3e-65 255.8 945 29.3
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.7e-65 255.4 908 29.0
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 4.2e-64 250.8 924 30.0
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 9.3e-64 249.6 937 29.0
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 7.9e-63 246.5 932 31.7
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 1.8e-62 245.4 940 29.5
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 2.3e-62 245.0 923 34.3
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 3.3e-61 241.1 926 31.0
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 3.3e-61 241.1 926 31.0
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.4e-61 240.0 921 29.2
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.3e-60 239.2 943 31.2
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 1.6e-60 238.8 929 28.3
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 2.8e-60 238.0 925 28.8
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 6.3e-60 236.9 943 29.7
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 3.1e-59 234.6 933 29.0
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 6.9e-59 233.4 918 28.8
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 6.9e-59 233.4 932 28.1
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 5.0e-57 227.3 983 27.5
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 7.2e-56 223.4 971 29.0
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 2.1e-55 221.9 929 27.4
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.4e-54 219.2 874 27.9
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.5e-53 215.7 468 35.3
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 9.7e-53 213.0 943 27.4
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.4e-51 209.1 939 29.0
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 3.4e-50 204.5 933 25.5
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.2e-49 201.8 946 28.5
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 1.4e-48 199.1 932 26.3
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 1.9e-48 198.7 1018 28.8
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 4.2e-48 197.6 935 26.7
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 7.2e-48 196.8 929 28.1
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 9.4e-48 196.4 931 27.7
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 2.7e-47 194.9 928 26.0
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 1.4e-46 192.6 377 36.3
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 3.9e-46 191.0 928 25.2
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 5.1e-46 190.7 563 32.5
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.6e-45 188.3 838 28.8
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.6e-45 188.3 838 27.8
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 3.3e-45 188.0 838 27.1
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.2e-44 185.3 927 27.1
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 2.2e-44 185.3 909 26.7
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 6.3e-44 183.7 470 31.5
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 8.2e-44 183.3 934 26.3
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 5.3e-43 180.6 835 27.9
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.6e-42 179.1 931 26.1
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 2.6e-42 178.3 933 25.3
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 3.5e-42 177.9 958 28.6
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 1.1e-40 172.9 945 26.2
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.5e-40 172.6 935 27.8
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 1.9e-40 172.2 945 26.5
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 7.2e-40 170.2 591 29.3
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 7.2e-40 170.2 437 35.7
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 7.2e-40 170.2 925 27.2
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 2.1e-39 168.7 691 29.7
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 2.7e-39 168.3 888 28.2
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.2e-38 164.1 433 34.6
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 8.8e-38 163.3 539 32.8
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 1.1e-37 162.9 891 27.4
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 2.6e-37 161.8 925 26.9
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 7.5e-37 160.2 896 25.9
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 1.7e-36 159.1 988 25.3
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 2.2e-36 158.7 177 52.0
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 4.8e-36 157.5 958 24.8
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 6.3e-36 157.1 447 32.9
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 5.3e-35 154.1 928 25.8
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 9.1e-35 153.3 831 26.1
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 1.6e-34 152.5 544 30.3
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 2.0e-34 152.1 510 30.2
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 2.7e-34 151.8 947 25.2
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.5e-34 151.4 922 26.4
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 1.0e-33 149.8 935 27.3
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 1.5e-32 146.0 893 25.1
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 8.0e-31 140.2 935 26.0
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.0e-30 139.8 935 25.2
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 4.0e-30 137.9 923 23.5
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 1.2e-29 136.3 938 26.9
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 3.4e-29 134.8 357 31.1
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 2.2e-28 132.1 944 26.6
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 8.3e-28 130.2 942 25.8
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 9.1e-27 126.7 786 26.7
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 2.0e-26 125.6 944 25.5
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 3.5e-26 124.8 926 22.7
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 2.9e-25 121.7 938 26.1
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 1.1e-24 119.8 370 30.0
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 7.2e-24 117.1 260 34.6
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 2.1e-23 115.5 295 32.9
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 8.0e-23 113.6 497 25.2
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 1.8e-22 112.5 890 25.1
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 1.8e-22 112.5 286 34.3
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 4.0e-22 111.3 133 48.9
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 4.0e-22 111.3 775 24.6
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 8.8e-22 110.2 390 29.7
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.8e-20 105.1 112 52.7
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 3.7e-20 104.8 946 24.1
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 8.3e-20 103.6 952 24.9
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 1.2e-18 99.8 173 40.5
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 3.5e-18 98.2 930 23.7
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.0e-17 96.7 776 25.1
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 1.3e-17 96.3 111 49.5
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.7e-17 95.9 113 49.6
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 8.6e-17 93.6 123 47.2
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.9e-16 92.4 96 49.0
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.9e-16 92.4 104 46.2
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 3.3e-16 91.7 167 37.1
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 2.8e-15 88.6 440 26.1
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 4.7e-15 87.8 101 53.5
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 3.0e-14 85.1 153 35.9
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 3.0e-14 85.1 113 40.7
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 8.9e-14 83.6 210 34.8
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 2.6e-13 82.0 860 24.0
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 4.4e-13 81.3 106 42.5
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 5.7e-13 80.9 152 37.5
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 1.3e-12 79.7 104 45.2
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 2.9e-12 78.6 83 48.2
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 1.1e-11 76.6 907 21.1
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.8e-11 75.9 104 35.6
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 2.5e-08 65.5 114 38.6
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 1.2e-07 63.2 60 50.0
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.3e-06 58.9 154 33.8
MCO08G035 Micromonas commoda HOM05D004831 ORTHO05D003975 5.2e-06 57.8 79 46.8


User provided reference genes

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