Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 1.6e-86 322.8 165 100.0
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 2.3e-69 265.8 161 82.6
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 4.4e-57 224.9 169 70.4
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 6.0e-54 214.5 163 69.3
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.3e-53 213.4 167 68.9
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 2.3e-53 212.6 164 68.3
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 8.1e-51 204.1 166 63.9
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 2.0e-49 199.5 163 63.8
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 1.9e-44 183.0 166 57.8
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 1.4e-42 176.8 167 56.3
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 5.2e-42 174.9 173 52.0
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 5.2e-42 174.9 163 54.0
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 1.2e-41 173.7 170 54.7
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 1.2e-41 173.7 159 54.1
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 4.4e-41 171.8 167 53.3
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 5.8e-41 171.4 167 53.3
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 7.6e-41 171.0 166 54.8
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 7.6e-41 171.0 163 55.2
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 1.7e-40 169.9 161 55.3
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 3.2e-39 165.6 168 53.0
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 5.4e-39 164.9 174 52.3
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 9.2e-39 164.1 170 51.8
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 9.2e-39 164.1 174 51.7
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 9.2e-39 164.1 162 51.9
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 2.7e-38 162.5 174 51.1
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 2.7e-38 162.5 167 50.3
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 6.0e-38 161.4 162 51.2
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 6.0e-38 161.4 162 51.2
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 3.0e-37 159.1 172 50.0
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 3.9e-37 158.7 172 49.4
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 1.9e-36 156.4 168 50.0
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 2.5e-36 156.0 175 49.7
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 5.6e-36 154.8 163 52.1
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 2.8e-35 152.5 179 49.7
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 4.7e-35 151.8 169 49.7
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 1.1e-34 150.6 160 48.1
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 2.4e-34 149.4 170 48.8
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 2.4e-34 149.4 167 49.1
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 3.1e-34 149.1 167 44.9
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 3.1e-34 149.1 165 46.7
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 4.0e-34 148.7 169 49.1
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 6.9e-34 147.9 167 46.1
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 6.9e-34 147.9 176 47.7
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 6.9e-34 147.9 167 47.9
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 8.9e-34 147.5 174 47.7
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 1.2e-33 147.1 161 47.8
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 1.2e-33 147.1 161 47.8
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.5e-33 146.7 163 47.2
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.5e-33 146.7 174 46.6
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 1.5e-33 146.7 166 47.0
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 2.0e-33 146.4 161 48.4
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 3.4e-33 145.6 161 47.2
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 3.4e-33 145.6 161 47.2
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 3.4e-33 145.6 161 47.2
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 3.4e-33 145.6 157 49.0
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 4.4e-33 145.2 172 45.3
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.3e-32 143.7 171 44.4
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 2.9e-32 142.5 166 45.8
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 3.8e-32 142.1 170 43.5
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 1.4e-31 140.2 166 44.0
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 1.4e-31 140.2 166 45.8
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 3.2e-31 139.0 166 44.0
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 4.2e-31 138.7 152 48.0
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 5.4e-31 138.3 166 44.0
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 5.4e-31 138.3 170 42.9
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 5.4e-31 138.3 166 43.4
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 7.1e-31 137.9 152 48.0
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 2.7e-30 136.0 167 44.3
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 7.8e-30 134.4 167 42.5
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 1.0e-29 134.0 172 44.2
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 1.3e-29 133.7 170 44.7
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 1.1e-28 130.6 165 44.8
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 2.5e-28 129.4 164 43.3
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 5.6e-28 128.3 165 41.8
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 1.6e-27 126.7 164 44.5
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.8e-26 123.2 168 42.9
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 4.0e-26 122.1 138 46.4
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 9.0e-26 120.9 162 44.4
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 2.6e-25 119.4 160 41.2
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 5.8e-25 118.2 154 43.5
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.3e-24 117.1 160 41.9
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 4.9e-24 115.2 162 43.8
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 4.9e-24 115.2 165 40.6
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 7.1e-23 111.3 127 45.7
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 1.0e-21 107.5 160 40.6
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.5e-20 103.6 160 38.1
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 1.9e-20 103.2 138 41.3
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.3e-20 102.4 160 38.8
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 1.6e-19 100.1 140 38.6
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.8e-19 99.4 164 37.8
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.8e-19 99.4 123 43.1
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 3.6e-19 99.0 163 37.4
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.4e-18 97.1 136 36.8
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 4.2e-15 85.5 164 36.0
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 6.2e-11 71.6 151 34.4
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.4e-10 70.5 135 35.6
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 5.3e-10 68.6 102 37.3
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 3.4e-09 65.9 132 32.6
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 3.2e-07 59.3 126 34.1
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 1.6e-06 57.0 158 32.3


User provided reference genes

Program Settings