Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 3.4e-132 475.3 299 100.0
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 1.2e-113 413.7 313 76.7
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 5.3e-109 398.3 301 82.7
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 2.2e-107 392.9 305 81.3
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 3.4e-92 342.4 314 66.9
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 1.1e-90 337.4 287 73.2
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.9e-90 336.7 302 72.5
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 1.9e-90 336.7 317 63.1
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 2.5e-90 336.3 301 71.4
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 7.9e-89 331.3 309 66.7
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 1.4e-88 330.5 302 69.5
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 2.5e-87 326.2 292 68.5
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 4.3e-87 325.5 325 67.4
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 3.7e-86 322.4 332 63.0
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 4.8e-86 322.0 289 71.6
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 6.3e-86 321.6 309 67.0
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 1.1e-85 320.9 306 70.6
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 1.1e-85 320.9 302 69.5
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 1.8e-85 320.1 318 62.9
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 5.3e-85 318.5 307 64.5
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 9.1e-85 317.8 290 70.7
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.2e-84 317.4 301 72.4
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.5e-84 317.0 290 73.4
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 2.0e-84 316.6 301 69.8
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.4e-84 315.8 307 65.8
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 1.3e-83 313.9 312 66.7
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.7e-83 313.5 297 73.4
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.2e-83 313.2 300 64.3
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 2.9e-83 312.8 298 62.4
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 6.5e-83 311.6 298 62.4
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 8.5e-83 311.2 318 62.9
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.5e-82 308.5 316 66.5
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 5.5e-82 308.5 298 62.1
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 3.6e-81 305.8 314 67.5
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 1.8e-80 303.5 314 67.5
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.9e-80 302.4 313 65.8
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 3.9e-80 302.4 309 62.1
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 6.7e-80 301.6 305 67.5
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 2.6e-79 299.7 288 70.8
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.6e-79 299.7 302 60.9
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 3.3e-79 299.3 296 70.3
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 5.7e-79 298.5 300 67.7
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 2.8e-78 296.2 310 59.7
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 3.7e-78 295.8 319 62.4
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 1.8e-77 293.5 297 67.0
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 5.3e-77 292.0 296 66.6
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 7.0e-77 291.6 297 65.0
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 2.6e-76 289.7 301 61.1
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 5.9e-76 288.5 297 61.6
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 5.9e-76 288.5 303 63.4
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 5.9e-76 288.5 305 63.3
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 5.9e-76 288.5 305 63.3
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 7.7e-76 288.1 292 65.4
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 2.9e-75 286.2 306 65.0
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 2.9e-75 286.2 289 63.0
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 3.8e-75 285.8 314 57.0
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 3.8e-75 285.8 315 67.0
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 1.4e-74 283.9 306 62.4
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-74 283.9 295 63.4
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-74 283.9 295 63.4
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 1.9e-74 283.5 314 59.6
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 2.5e-74 283.1 295 62.4
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 4.2e-74 282.3 285 64.9
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 9.4e-74 281.2 295 67.1
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 9.4e-74 281.2 285 67.4
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.2e-73 280.8 298 66.1
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 2.3e-72 276.6 312 59.6
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 3.0e-72 276.2 297 57.9
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.0e-72 276.2 283 67.8
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 5.2e-72 275.4 296 61.8
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 1.1e-71 274.2 312 61.5
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 3.3e-71 272.7 297 63.6
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 4.4e-71 272.3 301 59.8
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 1.3e-70 270.8 285 64.9
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 1.7e-70 270.4 314 62.1
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 2.8e-70 269.6 308 60.7
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 4.8e-70 268.9 314 61.8
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 2.4e-69 266.5 298 68.1
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 7.0e-69 265.0 298 66.1
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 1.2e-68 264.2 295 60.7
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 1.2e-68 264.2 312 65.7
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 1.6e-68 263.8 303 60.4
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 3.5e-68 262.7 299 61.2
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 4.5e-68 262.3 300 61.3
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 4.5e-68 262.3 299 65.2
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 1.0e-67 261.2 349 56.2
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 1.7e-67 260.4 284 54.2
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 2.9e-67 259.6 309 62.1
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 5.0e-67 258.8 299 57.9
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 5.0e-67 258.8 295 60.0
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 1.1e-66 257.7 304 64.8
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 1.2e-65 254.2 391 52.2
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 2.1e-65 253.4 295 53.6
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 3.6e-65 252.7 290 66.6
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 3.6e-65 252.7 290 66.6
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 4.7e-65 252.3 312 57.7
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 6.1e-65 251.9 295 66.4
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 6.1e-65 251.9 317 55.8
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 8.0e-65 251.5 286 55.6
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 8.0e-65 251.5 305 58.4
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.8e-64 250.4 308 62.3
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 2.3e-64 250.0 309 62.5
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 3.0e-64 249.6 310 59.0
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 8.8e-64 248.1 292 65.8
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 1.2e-63 247.7 309 56.6
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 2.6e-63 246.5 315 60.0
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 3.7e-62 242.7 324 54.3
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 6.3e-62 241.9 304 62.5
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 8.2e-62 241.5 309 59.9
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.4e-61 240.7 316 51.9
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.4e-61 240.7 302 58.9
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.8e-61 240.4 312 57.4
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 4.1e-61 239.2 299 58.5
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 5.3e-61 238.8 315 58.7
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 1.6e-60 237.3 290 56.6
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 2.7e-60 236.5 308 58.8
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 4.5e-60 235.7 300 58.0
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 5.9e-60 235.3 310 58.7
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 1.3e-59 234.2 306 58.5
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 2.7e-57 226.5 320 54.4
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 2.7e-57 226.5 293 57.0
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 4.7e-57 225.7 310 55.8
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 8.0e-57 224.9 300 57.7
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 1.0e-56 224.6 304 57.2
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 2.3e-56 223.4 297 59.6
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 4.0e-56 222.6 315 55.2
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 5.2e-56 222.2 262 57.3
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 1.2e-55 221.1 287 55.4
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.6e-55 219.9 290 54.1
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 5.7e-55 218.8 298 54.0
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.8e-54 216.5 316 57.0
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 4.8e-54 215.7 306 57.5
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 1.1e-53 214.5 296 54.1
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 3.5e-52 209.5 304 55.3
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 5.9e-52 208.8 290 54.5
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 5.0e-51 205.7 296 51.4
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 5.0e-51 205.7 330 52.1
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 5.0e-51 205.7 227 60.8
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 6.6e-51 205.3 312 53.8
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 2.3e-48 196.8 291 53.6
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.0e-47 193.7 210 62.9
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 2.4e-45 186.8 208 70.2
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 2.4e-45 186.8 230 65.7
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 4.1e-45 186.0 210 67.1
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 9.2e-45 184.9 291 53.3
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.0e-43 181.4 206 60.2
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 6.6e-43 178.7 275 50.5
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 2.1e-41 173.7 119 66.4
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 9.8e-39 164.9 100 80.0
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 9.2e-37 158.3 241 56.4
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 1.9e-34 150.6 158 64.6
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 7.3e-34 148.7 307 43.3
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 2.1e-33 147.1 198 55.1
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 4.7e-33 146.0 121 60.3
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 6.8e-32 142.1 100 67.0
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 2.2e-30 137.1 324 49.4
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 2.1e-28 130.6 321 45.2
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 4.6e-28 129.4 88 72.7
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 1.1e-26 124.8 308 44.8
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 9.5e-26 121.7 335 44.2
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.6e-25 119.8 211 50.2
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 2.3e-24 117.1 81 71.6
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.5e-23 114.4 109 58.7
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 2.0e-23 114.0 86 69.8
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 7.5e-23 112.1 78 75.6
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 5.4e-21 105.9 318 34.0
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 3.9e-19 99.8 90 62.2
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 6.6e-19 99.0 70 71.4
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 2.5e-18 97.1 63 73.0
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 2.0e-15 87.4 75 62.7
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.6e-15 87.0 95 55.8
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 3.8e-14 83.2 64 59.4
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 3.8e-14 83.2 104 52.9
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 4.2e-13 79.7 304 37.8
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 7.1e-13 79.0 45 86.7
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 2.7e-12 77.0 107 46.7
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 7.8e-12 75.5 116 48.3
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 1.7e-11 74.3 49 69.4
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 8.7e-11 72.0 78 55.1
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.3e-09 68.2 216 34.3
SEGI_24544 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.4e-08 64.7 140 40.0
Sabra06G0076200 Salix brachista HOM05D003822 ORTHO05D349384 5.8e-07 59.3 46 60.9
SEGI_25865 Sequoiadendron giganteum HOM05D000010 ORTHO05D004484 1.7e-06 57.8 79 46.8
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 2.9e-06 57.0 263 42.6
Duzib170G0932 Durio zibethinus HOM05D003822 ORTHO05D004484 6.4e-06 55.8 31 83.9


User provided reference genes

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