Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G154600 Phaseolus vulgaris HOM05D001295 ORTHO05D005319 1.6e-194 682.6 334 100.0
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 4.9e-164 581.3 331 88.8
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 2.8e-151 538.9 331 82.5
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 4.2e-123 445.3 323 72.4
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 4.3e-120 435.3 317 70.3
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 5.7e-120 434.9 323 71.5
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 1.7e-119 433.3 317 69.1
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 1.0e-116 424.1 320 70.0
arahy.Tifrunner.gnm1.ann1.982DXJ Arachis hypogaea HOM05D001295 ORTHO05D005319 3.3e-112 409.1 304 70.1
arahy.Tifrunner.gnm1.ann1.CA0DYB Arachis hypogaea HOM05D001295 ORTHO05D005319 3.6e-98 362.5 328 60.7
arahy.Tifrunner.gnm1.ann1.1HI5HP Arachis hypogaea HOM05D001295 ORTHO05D005319 2.6e-96 356.3 328 60.4
Lalb_Chr14g0372571 Lupinus albus HOM05D001295 ORTHO05D005319 1.6e-93 347.1 274 66.8
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 7.7e-93 344.7 307 61.6
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 2.9e-92 342.8 316 57.3
Lalb_Chr22g0352051 Lupinus albus HOM05D001295 ORTHO05D005319 8.0e-90 334.7 275 66.9
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 2.3e-89 333.2 312 56.7
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 1.3e-87 327.4 315 57.5
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 1.7e-87 327.0 318 56.9
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 3.1e-86 322.8 315 57.8
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 2.7e-85 319.7 382 50.5
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 2.3e-84 316.6 319 54.5
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 2.9e-84 316.2 320 54.1
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 2.9e-84 316.2 313 55.9
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 3.3e-83 312.8 318 53.8
QL10p051666 Quercus lobata HOM05D001295 ORTHO05D005319 2.8e-82 309.7 268 62.7
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 6.1e-82 308.5 317 53.9
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 6.1e-82 308.5 318 52.5
Dinv05087 Davidia involucrata HOM05D001295 ORTHO05D005319 1.8e-81 307.0 283 58.7
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 8.9e-81 304.7 313 54.3
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 8.9e-81 304.7 322 54.3
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 2.0e-80 303.5 319 52.7
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 2.0e-80 303.5 313 53.7
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 7.5e-80 301.6 289 56.7
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 7.5e-80 301.6 289 56.7
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 7.5e-80 301.6 322 52.5
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 7.5e-80 301.6 339 50.7
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 9.8e-80 301.2 329 52.0
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 8.3e-79 298.1 318 51.3
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 8.3e-79 298.1 317 50.8
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 3.5e-77 292.7 320 50.3
Actinidia34573 Actinidia chinensis HOM05D001295 ORTHO05D005319 7.8e-77 291.6 296 53.7
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 1.3e-76 290.8 263 57.4
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.3e-76 290.8 360 47.8
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 3.0e-76 289.7 318 49.4
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 8.6e-76 288.1 314 50.6
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 7.3e-75 285.0 314 52.2
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 9.5e-75 284.6 322 48.4
ATR0743G262 Amborella trichopoda HOM05D001295 ORTHO05D005319 2.8e-74 283.1 323 48.0
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 6.2e-74 282.0 360 45.8
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 6.2e-74 282.0 313 50.2
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 1.0e-73 281.2 322 50.0
Duzib212G0222 Durio zibethinus HOM05D001295 ORTHO05D005319 3.1e-73 279.6 330 48.2
Aqoxy5G00377 Aquilegia oxysepala HOM05D001295 ORTHO05D005319 8.9e-73 278.1 287 51.9
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 2.6e-72 276.6 333 45.9
HPP92_007597 Vanilla planifolia HOM05D001295 ORTHO05D005319 2.2e-71 273.5 313 48.9
PSO017G5265 Papaver somniferum HOM05D001295 ORTHO05D005319 2.9e-71 273.1 280 52.9
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 4.1e-70 269.2 309 49.8
MSTRG.4291 Avicennia marina HOM05D001295 ORTHO05D005319 2.0e-69 266.9 282 51.8
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 2.7e-69 266.5 308 46.1
Eucgr.H00340 Eucalyptus grandis HOM05D001295 ORTHO05D005319 6.0e-69 265.4 298 51.0
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 5.0e-68 262.3 303 44.9
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 6.6e-68 261.9 312 48.4
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 3.6e-66 256.1 310 46.5
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 1.1e-65 254.6 308 43.8
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.5e-64 250.8 317 45.1
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 1.5e-64 250.8 320 44.1
MELO3C022439.2 Cucumis melo HOM05D001295 ORTHO05D005319 1.5e-64 250.8 322 43.5
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 1.5e-64 250.8 337 43.6
TWI15G0408 Tripterygium wilfordii HOM05D001295 ORTHO05D005319 2.2e-63 246.9 271 50.9
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 4.9e-63 245.7 309 43.7
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.4e-62 244.2 314 46.2
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 5.4e-62 242.3 310 44.5
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 7.1e-62 241.9 317 43.8
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.6e-61 240.7 310 45.5
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.7e-60 237.3 302 44.7
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 3.9e-60 236.1 246 52.0
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 1.1e-59 234.6 310 42.3
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 1.1e-59 234.6 310 42.3
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 3.3e-59 233.0 310 41.9
Sabra07G0107500 Salix brachista HOM05D001295 ORTHO05D005319 7.3e-59 231.9 267 50.2
EL10Ac3g06020 Beta vulgaris HOM05D001295 ORTHO05D005319 3.6e-58 229.6 344 42.7
ECA240G1882 Erigeron canadensis HOM05D001295 ORTHO05D005319 2.0e-56 223.8 191 56.5
Ciclev10021666m.g Citrus clementina HOM05D001295 ORTHO05D005319 2.2e-55 220.3 267 48.3
CARHR138550 Cardamine hirsuta HOM05D001295 ORTHO05D005319 2.9e-55 219.9 287 41.8
COL.COLO4_21796 Corchorus olitorius HOM05D001295 ORTHO05D005319 3.8e-55 219.5 261 46.7
Sabra07G0119300 Salix brachista HOM05D001295 ORTHO05D005319 8.4e-55 218.4 252 49.6
Migut.G01326 Erythranthe guttata HOM05D001295 ORTHO05D005319 5.4e-54 215.7 241 50.6
Gohir.D08G098300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 5.4e-54 215.7 264 48.1
Gorai.004G105900 Gossypium raimondii HOM05D001295 ORTHO05D005319 9.2e-54 214.9 264 47.7
Mapoly0209s0009 Marchantia polymorpha HOM05D001295 ORTHO05D005319 1.6e-53 214.2 320 40.9
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 2.1e-53 213.8 314 43.0
AagrBONN_evm.TU.Sc2ySwM_228.190 Anthoceros agrestis HOM05D001295 ORTHO05D005319 1.1e-51 208.0 332 39.5
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 2.5e-51 206.8 346 40.2
Sed0000422 Sechium edule HOM05D001295 ORTHO05D005319 4.3e-51 206.1 249 47.0
CsaV3_4G002500 Cucumis sativus L. HOM05D001295 ORTHO05D005319 8.1e-50 201.8 242 48.8
Lj3C135G1 Lonicera japonica HOM05D001295 ORTHO05D005319 8.1e-50 201.8 208 55.3
ClCG07G011710 Citrullus lanatus HOM05D001295 ORTHO05D005319 1.8e-49 200.7 234 49.6
RcHm_v2.0_Chr6g0292651 Rosa chinensis HOM05D001295 ORTHO05D005319 2.4e-49 200.3 251 47.4
THA.LOC104820845 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 2.4e-49 200.3 257 47.9
Manes.04G047700 Manihot esculenta HOM05D001295 ORTHO05D005319 4.0e-49 199.5 240 47.5
Ciclev10021418m.g Citrus clementina HOM05D001295 ORTHO05D005319 8.9e-49 198.4 298 43.0
AT3G03320 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 3.4e-48 196.4 253 45.5
Zm00001eb064040 Zea mays HOM05D001295 ORTHO05D005319 4.4e-48 196.1 284 39.8
FAN24G0827 Fragaria x ananassa HOM05D001295 ORTHO05D005319 7.6e-48 195.3 254 47.2
AL3G12950 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 2.2e-47 193.7 251 46.6
Thhalv10021391m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 2.2e-47 193.7 251 45.8
FAN27G1301 Fragaria x ananassa HOM05D001295 ORTHO05D005319 3.8e-47 193.0 251 46.6
Sp3g02350 Schrenkiella parvula HOM05D001295 ORTHO05D005319 6.4e-47 192.2 251 47.8
FvH4_2g24830 Fragaria vesca HOM05D001295 ORTHO05D005319 1.4e-46 191.0 254 46.9
BraA05t23124Z Brassica rapa HOM05D001295 ORTHO05D005319 7.1e-46 188.7 262 45.8
Carub.0003s0249 Capsella rubella HOM05D001295 ORTHO05D005319 7.1e-46 188.7 260 43.1
CARHR077360 Cardamine hirsuta HOM05D001295 ORTHO05D005319 1.2e-45 188.0 251 45.8
A05p43870 Brassica napus HOM05D001295 ORTHO05D005319 6.0e-45 185.7 262 45.0
Gohir.A08G092500 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.0e-44 184.9 267 44.2
BolC5t35010H Brassica oleracea HOM05D001295 ORTHO05D005319 1.3e-44 184.5 262 45.0
Migut.G01331 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.3e-44 184.5 198 51.0
C05p63460 Brassica napus HOM05D001295 ORTHO05D005319 1.7e-44 184.1 262 45.0
BcaC05g30303 Brassica carinata HOM05D001295 ORTHO05D005319 3.0e-44 183.3 252 44.4
FAN15G1214 Fragaria x ananassa HOM05D001295 ORTHO05D005319 6.6e-44 182.2 251 45.4
Sabra07G0119200 Salix brachista HOM05D001295 ORTHO05D005319 7.3e-43 178.7 217 47.5
Thecc.04G173200 Theobroma cacao HOM05D001295 ORTHO05D005319 1.6e-42 177.6 202 49.0
Pp3c13_1370 Physcomitrium patens HOM05D001295 ORTHO05D005319 4.8e-42 176.0 290 38.3
vmacro00676 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 4.8e-42 176.0 161 59.6
Aa31LG5G13780 Aethionema arabicum HOM05D001295 ORTHO05D005319 1.4e-41 174.5 268 41.0
RhsimUnG0137700 Rhododendron simsii HOM05D001295 ORTHO05D005319 2.4e-41 173.7 157 59.9
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 1.7e-39 167.5 217 45.6
Lj3g0015879 Lotus japonicus HOM05D001295 ORTHO05D005319 3.8e-39 166.4 157 59.9
Haze_01445 Corylus avellana HOM05D001295 ORTHO05D005319 4.6e-37 159.5 154 57.1
SMO337G0100 Selaginella moellendorffii HOM05D001295 ORTHO05D005319 1.8e-36 157.5 194 49.5
AT2G43465 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 7.4e-35 152.1 215 40.5
Cpa.g.sc9.324 Carica papaya HOM05D001295 ORTHO05D005319 4.8e-34 149.4 129 60.5
Hma1.2p1_0401F.1_g144800 Hydrangea macrophylla HOM05D001295 ORTHO05D005319 1.4e-33 147.9 152 52.6
C01p44730 Brassica napus HOM05D001295 ORTHO05D005319 4.5e-32 142.9 283 31.8
vmacro00675 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 2.2e-31 140.6 172 45.9
SalBow5G4879 Salvia bowleyana HOM05D001295 ORTHO05D005319 1.1e-27 128.3 160 43.8
unitig_37.g12026 Utricularia gibba HOM05D001295 ORTHO05D005319 4.3e-27 126.3 142 52.8
A09p42860 Brassica napus HOM05D001295 ORTHO05D005319 5.6e-27 125.9 219 36.1
BolC2t06464H Brassica oleracea HOM05D001295 ORTHO05D005319 2.4e-25 120.6 255 31.8
Glyma.13G345802 Glycine max HOM05D001295 ORTHO05D005319 4.0e-25 119.8 76 76.3
Lj3A83T16 Lonicera japonica HOM05D001295 ORTHO05D005319 1.5e-16 91.3 66 69.7
Sabra17G0001700 Salix brachista HOM05D001295 ORTHO05D005319 1.9e-14 84.3 105 47.6
AL4G36180 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 6.7e-12 75.9 128 40.6
Sabra17G0000500 Salix brachista HOM05D001295 ORTHO05D005319 3.7e-10 70.1 82 42.7
Sabra17G0015200 Salix brachista HOM05D001295 ORTHO05D005319 6.3e-10 69.3 178 32.0
Sabra17G0001500 Salix brachista HOM05D001295 ORTHO05D005319 1.1e-09 68.6 81 42.0
MELO3C001160.2 Cucumis melo HOM05D001295 ORTHO05D005319 2.0e-08 64.3 56 57.1


User provided reference genes

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