Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 0.0e+00 1284.6 623 100.0
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 0.0e+00 1192.9 645 90.5
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 0.0e+00 1149.0 623 89.6
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 1.7e-311 1072.0 624 83.8
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 1.2e-309 1065.8 573 88.1
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 4.4e-307 1057.4 557 89.0
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.3e-306 1055.8 627 82.5
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 1.2e-301 1039.3 557 88.0
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 4.8e-298 1027.3 624 81.1
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 2.6e-296 1021.5 623 80.6
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 1.0e-292 1009.6 558 84.2
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.1e-286 989.6 550 83.6
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 2.1e-285 985.3 631 75.0
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 4.0e-284 981.1 545 83.3
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 4.0e-284 981.1 558 81.9
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 6.8e-284 980.3 545 83.1
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 2.0e-283 978.8 540 83.7
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 2.6e-283 978.4 621 76.5
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 4.4e-283 977.6 545 82.8
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 7.5e-283 976.9 545 82.4
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 8.3e-282 973.4 549 82.1
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 1.8e-281 972.2 541 83.9
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.1e-281 971.5 545 83.9
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 4.5e-280 967.6 586 77.8
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 7.7e-280 966.8 581 79.5
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 2.3e-279 965.3 564 80.3
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 8.6e-279 963.4 558 80.5
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 1.1e-278 963.0 559 80.1
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 7.2e-278 960.3 537 81.8
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.2e-277 959.5 537 83.4
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 2.3e-276 955.3 595 76.1
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 3.0e-276 954.9 537 81.0
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 3.4e-275 951.4 558 79.0
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 4.4e-275 951.0 507 88.2
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 1.3e-274 949.5 551 80.0
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 2.4e-273 945.3 549 80.3
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 4.1e-273 944.5 553 80.3
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 4.1e-273 944.5 541 79.7
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 4.6e-272 941.0 554 79.2
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 3.9e-271 937.9 584 75.3
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 3.9e-271 937.9 545 79.6
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 5.0e-271 937.6 580 75.7
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 8.6e-271 936.8 587 75.3
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 9.5e-270 933.3 545 78.2
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 1.2e-269 932.9 588 75.0
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 2.8e-269 931.8 587 75.5
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 4.7e-269 931.0 620 72.7
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 4.7e-269 931.0 549 79.4
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 4.7e-269 931.0 619 72.5
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 8.0e-269 930.2 649 70.3
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.0e-268 929.9 600 74.3
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 1.4e-268 929.5 588 74.1
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 5.2e-268 927.5 583 75.3
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 5.2e-268 927.5 583 75.3
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 2.2e-266 922.2 584 73.8
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 2.9e-266 921.8 555 76.6
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 6.4e-266 920.6 609 72.2
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 1.4e-265 919.5 621 72.0
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 1.9e-265 919.1 580 74.1
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 3.2e-265 918.3 550 79.1
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.2e-264 916.4 635 70.1
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 2.7e-264 915.2 631 69.1
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 1.9e-262 909.1 585 72.3
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 9.5e-262 906.7 537 77.1
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.2e-261 906.4 549 74.7
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.2e-261 906.4 549 75.6
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.3e-260 902.1 611 69.2
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 6.8e-260 900.6 552 75.2
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 2.2e-258 895.6 549 77.8
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.7e-258 894.8 549 74.5
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 2.1e-256 889.0 517 79.7
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 2.7e-256 888.6 599 69.8
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 3.1e-252 875.2 514 77.4
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 4.1e-249 864.8 550 76.0
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 2.3e-247 859.0 551 73.1
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 7.3e-246 854.0 549 74.0
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 9.6e-246 853.6 581 69.4
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 9.6e-246 853.6 705 62.4
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 8.1e-245 850.5 760 57.6
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 2.0e-243 845.9 550 71.6
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 1.6e-240 836.3 547 69.5
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 2.1e-240 835.9 468 82.1
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 6.0e-240 834.3 467 81.6
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 9.6e-238 827.0 540 69.6
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 1.2e-227 793.5 644 63.8
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 1.2e-227 793.5 648 63.3
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.3e-223 780.0 560 67.1
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.8e-223 779.6 432 81.9
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 8.1e-221 770.8 506 70.8
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 7.2e-193 677.9 449 72.6
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 5.3e-188 661.8 550 56.4
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 6.5e-186 654.8 449 66.6
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 3.0e-183 646.0 369 78.6
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.1e-169 600.9 441 65.5
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 7.2e-169 598.2 586 51.7
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.6e-168 595.9 585 53.7
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 1.0e-159 567.8 556 50.7
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 1.8e-159 567.0 608 48.2
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 3.4e-150 536.2 350 72.0
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 6.8e-135 485.3 357 68.1
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.3e-120 438.0 465 52.5
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 5.6e-113 412.5 348 62.1
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 3.9e-98 363.2 202 80.2
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 1.8e-95 354.4 201 79.1
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 2.4e-79 300.8 181 77.9
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 7.7e-78 295.8 190 74.7
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 3.3e-73 280.4 174 74.1
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 9.1e-71 272.3 172 72.1
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 1.6e-70 271.6 170 73.5
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.8e-56 224.2 150 72.0
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.5e-49 201.8 119 78.2
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 2.0e-46 191.4 116 72.4
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.6e-43 181.8 106 80.2
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-36 159.1 127 65.4
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.2e-35 153.3 127 63.0
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.0e-30 138.3 82 73.2
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 4.3e-28 130.6 77 76.6
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.8e-27 127.9 112 61.6
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.8e-27 127.9 112 61.6
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 5.2e-26 123.6 165 48.5
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.8e-18 98.6 78 67.9
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 1.2e-17 95.9 70 67.1
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 3.9e-13 80.9 52 67.3
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 3.6e-11 74.3 41 87.8
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 4.0e-10 70.9 40 85.0
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 4.0e-10 70.9 40 85.0
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.9e-10 70.1 59 59.3
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 7.6e-09 66.6 34 85.3
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 9.9e-09 66.2 42 71.4


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