Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 2.5e-83 312.0 152 100.0
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 6.5e-71 270.8 153 84.3
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 6.7e-68 260.8 151 80.1
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 6.3e-50 201.1 163 60.1
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.1e-49 200.3 167 59.9
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 4.5e-48 194.9 166 59.6
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.6e-45 185.3 154 59.7
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 3.6e-45 185.3 155 58.1
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 7.9e-45 184.1 155 58.7
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 1.8e-44 183.0 153 56.9
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.3e-44 182.6 156 55.8
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 3.0e-44 182.2 154 57.1
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 3.9e-44 181.8 154 59.1
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 5.2e-44 181.4 154 57.8
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.1e-43 180.3 156 55.1
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 2.0e-43 179.5 154 59.1
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 2.6e-43 179.1 155 58.7
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.7e-43 177.9 154 55.8
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 7.4e-43 177.6 158 55.7
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 9.7e-43 177.2 160 53.1
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.7e-42 176.4 156 54.5
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.7e-42 176.4 155 57.4
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.7e-42 176.4 148 55.4
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 2.8e-42 175.6 155 57.4
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 2.8e-42 175.6 153 59.5
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 3.7e-42 175.3 156 55.8
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 9.1e-41 170.6 149 54.4
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.2e-40 170.2 155 54.8
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.6e-40 169.9 154 56.5
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.0e-40 169.5 154 56.5
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 2.6e-40 169.1 166 51.8
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 3.5e-40 168.7 159 51.6
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 4.5e-40 168.3 146 54.8
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.2e-39 166.0 145 57.9
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 5.0e-39 164.9 157 52.2
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 5.0e-39 164.9 146 57.5
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 6.5e-39 164.5 143 56.6
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.1e-38 163.7 158 54.4
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.5e-38 163.3 165 52.1
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.9e-38 162.9 167 49.7
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 2.5e-38 162.5 155 51.6
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 4.2e-38 161.8 153 52.9
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 5.5e-38 161.4 168 50.0
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.1e-37 159.5 155 52.9
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.1e-37 159.5 146 51.4
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 3.6e-37 158.7 153 52.3
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 4.7e-37 158.3 154 53.9
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.0e-36 157.1 166 49.4
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 1.8e-36 156.4 142 54.9
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.3e-36 156.0 165 47.3
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 5.2e-36 154.8 192 44.3
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 6.7e-36 154.5 147 52.4
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.2e-35 153.7 148 52.7
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 2.0e-35 152.9 159 50.9
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 2.0e-35 152.9 158 51.9
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 2.0e-35 152.9 158 51.9
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 5.7e-35 151.4 142 53.5
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 5.7e-35 151.4 154 52.6
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 5.7e-35 151.4 154 52.6
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 7.5e-35 151.0 154 52.6
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 9.7e-35 150.6 159 46.5
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 1.3e-34 150.2 152 50.7
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.3e-34 150.2 156 46.8
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.7e-34 149.8 158 49.4
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.2e-34 149.4 163 46.0
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 2.8e-34 149.1 139 56.1
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.8e-34 149.1 161 46.0
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 3.7e-34 148.7 159 46.5
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 3.7e-34 148.7 160 45.6
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 4.8e-34 148.3 161 49.1
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 1.4e-33 146.7 147 47.6
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 2.4e-33 146.0 125 56.0
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 4.1e-33 145.2 155 46.5
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 5.3e-33 144.8 155 45.8
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 9.1e-33 144.1 143 47.6
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.7e-32 142.5 160 47.5
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 2.7e-32 142.5 188 41.5
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 5.0e-31 138.3 151 48.3
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.5e-30 136.7 157 45.2
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 4.2e-30 135.2 141 46.8
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 2.1e-29 132.9 168 40.5
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 3.6e-29 132.1 127 52.8
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 8.0e-29 131.0 144 44.4
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 4.8e-26 121.7 146 42.5
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.4e-25 119.4 151 37.7
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 2.4e-25 119.4 151 37.7
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 3.5e-24 115.5 150 40.0
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 3.8e-23 112.1 117 49.6
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 8.5e-23 110.9 151 35.8
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 6.1e-21 104.8 96 51.0
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.8e-20 103.2 103 47.6
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 2.3e-20 102.8 135 37.8
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 4.0e-20 102.1 102 49.0
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 6.8e-20 101.3 95 48.4
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 4.4e-19 98.6 85 57.6
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 7.5e-19 97.8 81 59.3
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.4e-17 93.6 92 46.7
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 6.6e-15 84.7 129 35.7
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.5e-14 83.6 95 42.1
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.1e-13 79.7 68 55.9
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 3.4e-11 72.4 58 53.4
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 7.8e-08 61.2 36 72.2


User provided reference genes

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