Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 2.5e-234 815.1 420 100.0
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 8.2e-217 756.9 420 92.4
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 2.2e-193 679.1 422 83.4
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 1.1e-168 597.0 427 74.2
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 5.0e-166 588.2 418 71.3
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 9.5e-165 583.9 417 75.1
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 2.3e-163 579.3 425 72.0
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.2e-159 567.0 420 71.2
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 6.2e-156 554.7 396 74.2
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 8.4e-153 544.3 410 71.7
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 8.4e-153 544.3 410 71.7
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 1.3e-145 520.4 473 60.0
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 4.5e-138 495.4 425 59.1
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 1.2e-135 487.3 399 62.9
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.6e-135 486.9 396 62.6
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.1e-135 486.5 406 61.3
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 2.3e-134 483.0 405 62.2
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 3.0e-134 482.6 406 60.8
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.5e-133 480.3 431 57.5
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 2.5e-133 479.6 405 61.7
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.1e-132 476.5 405 60.2
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 2.1e-132 476.5 437 56.5
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 3.7e-132 475.7 413 60.5
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 3.7e-132 475.7 406 60.3
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 2.4e-131 473.0 404 61.6
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 4.5e-130 468.8 399 60.2
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 4.5e-130 468.8 395 60.3
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.8e-130 468.4 412 60.4
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 5.8e-130 468.4 399 59.9
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 3.2e-128 462.6 396 62.1
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.3e-126 456.4 423 58.6
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.1e-126 455.3 423 58.4
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 2.5e-125 453.0 394 59.1
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 3.3e-125 452.6 402 58.5
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 3.4e-122 442.6 373 61.1
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 3.4e-122 442.6 402 56.7
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 7.6e-122 441.4 393 58.0
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.6e-119 433.7 395 56.2
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 6.7e-118 428.3 421 54.2
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.9e-117 426.8 414 55.1
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 2.2e-116 423.3 399 55.6
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.8e-116 422.9 399 54.9
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 4.8e-116 422.2 369 58.8
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.8e-116 422.2 407 56.5
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.1e-115 421.0 408 55.4
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 5.3e-115 418.7 432 52.5
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 5.3e-115 418.7 411 55.0
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 5.3e-115 418.7 467 50.5
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 2.6e-114 416.4 403 52.9
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 4.5e-114 415.6 405 52.3
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.0e-113 414.5 417 52.8
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.0e-113 414.5 418 51.7
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.3e-113 414.1 395 53.7
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.3e-113 414.1 408 53.2
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.7e-113 413.7 340 61.8
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 2.2e-113 413.3 427 51.8
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 2.2e-113 413.3 407 53.1
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 5.0e-113 412.1 405 55.1
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 8.5e-113 411.4 393 54.2
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 4.2e-112 409.1 399 55.1
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 5.5e-112 408.7 393 53.4
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 5.5e-112 408.7 395 55.7
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 7.2e-112 408.3 428 54.4
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 1.3e-110 404.1 401 54.9
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.3e-110 403.3 398 52.3
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.3e-110 403.3 416 53.1
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 2.3e-110 403.3 393 54.2
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.0e-110 402.9 412 51.0
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 3.0e-110 402.9 379 57.0
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 8.8e-110 401.4 351 57.8
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 8.8e-110 401.4 396 51.8
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 5.7e-109 398.7 407 52.8
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 2.2e-108 396.7 401 53.4
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 3.1e-107 392.9 405 53.3
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 6.9e-107 391.7 467 48.4
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.5e-106 390.6 428 51.2
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.6e-106 389.8 410 51.0
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 1.1e-104 384.4 406 51.2
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 9.4e-104 381.3 376 50.3
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 1.6e-103 380.6 368 54.9
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.7e-100 370.5 363 52.6
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.7e-100 370.5 340 56.2
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 6.3e-100 368.6 397 51.9
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 9.1e-99 364.8 344 56.4
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 2.9e-97 359.8 411 47.2
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 3.6e-95 352.8 410 48.5
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 2.6e-93 346.7 441 45.8
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.3e-91 339.0 214 83.2
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 7.7e-90 335.1 270 63.3
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 4.0e-86 322.8 369 46.9
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 4.0e-86 322.8 456 42.5
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.2e-82 311.2 250 65.2
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 7.7e-82 308.5 191 82.7
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 3.8e-81 306.2 311 49.8
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 1.6e-79 300.8 311 54.7
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 3.5e-74 283.1 399 41.1
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 4.5e-74 282.7 399 41.1
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 5.0e-73 279.3 342 47.1
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 6.3e-68 262.3 424 38.9
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 4.5e-66 256.1 249 51.8
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.8e-62 244.2 378 39.2
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 3.0e-62 243.4 402 36.1
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 5.2e-62 242.7 392 38.3
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 5.2e-62 242.7 373 38.6
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.5e-53 214.5 166 62.0
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 6.4e-52 209.1 295 38.0
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.2e-42 178.3 138 63.8
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 9.9e-37 158.7 210 46.2
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 5.1e-33 146.4 100 70.0
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 4.3e-32 143.3 163 47.9
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 4.4e-29 133.3 195 39.5
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.3e-25 120.9 90 62.2
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 3.8e-20 103.6 305 26.2
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.8e-17 94.7 92 50.0
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 6.0e-10 69.7 70 45.7
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 2.3e-09 67.8 56 62.5
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 7.4e-08 62.8 123 32.5
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 5.3e-06 56.6 65 49.2


User provided reference genes

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