Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 0.0e+00 1570.8 857 100.0
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 0.0e+00 1325.5 873 85.3
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 0.0e+00 1227.2 865 78.3
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 0.0e+00 1209.9 862 77.8
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 0.0e+00 1080.5 816 71.3
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 4.6e-307 1057.7 824 66.3
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 2.7e-283 978.8 899 62.1
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 2.7e-283 978.8 898 62.2
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.1e-276 956.8 810 65.3
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 1.8e-271 939.5 802 62.0
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 1.4e-268 929.9 812 63.1
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 5.1e-266 921.4 796 64.2
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 5.9e-262 907.9 823 61.1
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 5.0e-261 904.8 802 61.5
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 5.0e-261 904.8 802 61.5
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 8.5e-261 904.0 849 60.7
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.2e-260 901.7 808 61.8
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 5.5e-260 901.4 811 60.7
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.0e-258 897.1 810 59.1
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 3.0e-258 895.6 811 59.7
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 8.2e-256 887.5 816 58.1
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.2e-254 883.6 788 61.7
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 2.6e-254 882.5 785 61.4
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 2.2e-253 879.4 812 58.6
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 2.9e-253 879.0 814 61.4
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 6.5e-253 877.9 809 59.7
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 6.5e-253 877.9 788 61.2
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.6e-251 873.2 824 59.2
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 2.7e-251 872.5 809 59.2
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 5.7e-249 864.8 793 61.7
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 5.7e-249 864.8 793 60.9
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 9.7e-249 864.0 784 59.9
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 6.3e-248 861.3 815 58.8
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 8.2e-248 860.9 786 59.4
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 1.1e-247 860.5 791 59.3
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.4e-247 860.1 738 60.7
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 1.8e-247 859.8 809 58.6
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 3.1e-247 859.0 825 55.5
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 5.3e-247 858.2 800 55.9
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 7.0e-247 857.8 753 59.9
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 1.6e-246 856.7 753 59.9
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 7.7e-246 854.4 804 56.5
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.0e-245 854.0 788 60.7
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 1.7e-245 853.2 814 56.3
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 6.5e-245 851.3 721 63.0
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 8.5e-245 850.9 799 60.2
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 7.2e-244 847.8 806 57.1
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.6e-243 846.7 701 63.3
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 2.7e-243 845.9 811 57.7
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 3.0e-242 842.4 801 59.6
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 4.0e-242 842.0 809 58.8
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.5e-241 840.1 809 57.7
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 1.4e-239 833.6 583 68.8
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 3.1e-239 832.4 807 55.6
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 5.3e-239 831.6 798 57.1
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 9.1e-239 830.9 776 61.3
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 5.9e-238 828.2 827 57.7
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 5.9e-238 828.2 729 63.1
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 5.9e-238 828.2 796 59.2
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 1.7e-237 826.6 795 58.9
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.2e-236 822.4 809 58.1
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 1.2e-235 820.5 811 58.3
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 1.6e-235 820.1 805 58.9
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 2.1e-235 819.7 813 55.1
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 4.7e-235 818.5 722 59.8
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 9.8e-233 810.8 681 65.5
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 8.3e-232 807.7 679 60.7
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 1.8e-231 806.6 777 59.7
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 9.1e-231 804.3 803 54.5
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 2.0e-230 803.1 824 54.4
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 3.6e-227 792.3 796 56.0
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 4.7e-227 792.0 616 65.6
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.8e-226 790.0 786 58.0
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 4.0e-226 788.9 805 57.5
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 1.2e-225 787.3 790 59.2
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 7.5e-225 784.6 794 56.2
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 1.6e-222 776.9 793 55.7
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 2.3e-221 773.1 779 53.3
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.3e-220 769.2 888 52.9
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 1.2e-219 767.3 770 58.6
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 2.3e-218 763.1 808 55.3
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 2.0e-217 760.0 535 64.9
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 2.9e-216 756.1 750 57.9
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 1.2e-211 740.7 784 54.0
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 1.4e-210 737.3 774 55.8
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 4.4e-209 732.3 711 57.1
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 2.8e-195 686.4 621 62.3
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 3.5e-166 589.7 588 55.8
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 4.2e-151 539.7 330 72.4
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 7.9e-150 535.4 607 47.1
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 3.0e-149 533.5 823 43.1
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.5e-148 530.4 586 55.1
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 7.4e-148 528.9 461 55.1
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 1.8e-138 497.7 496 57.1
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 5.2e-133 479.6 399 57.1
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 4.1e-130 469.9 377 58.4
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 2.3e-125 454.1 414 59.9
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 6.3e-123 446.0 264 74.6
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 5.7e-108 396.4 349 54.2
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 7.5e-100 369.4 411 47.7
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 4.4e-84 317.0 532 43.8
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 1.3e-83 315.5 374 55.3
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 2.4e-74 284.6 187 66.8
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 2.4e-69 268.1 346 43.4
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 9.9e-68 262.7 196 60.7
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 4.6e-57 227.3 337 56.1
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 6.0e-57 226.9 176 58.5
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-32 143.7 360 31.7
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.8e-29 135.6 117 58.1
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 2.5e-26 125.2 78 66.7
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.9e-18 99.0 80 58.8
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.2e-18 98.2 111 47.7
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.6e-15 88.6 72 50.0
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 1.2e-09 69.7 249 38.6


User provided reference genes

Program Settings