Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 7.1e-74 280.4 132 100.0
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 1.2e-57 226.5 137 81.8
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 1.8e-37 159.5 121 62.0
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 1.3e-32 143.3 125 56.0
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 1.8e-32 142.9 116 56.9
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 3.0e-32 142.1 122 54.1
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 5.1e-32 141.4 110 58.2
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 6.7e-32 141.0 127 54.3
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 8.7e-32 140.6 118 55.9
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 8.7e-32 140.6 121 52.1
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 1.5e-31 139.8 121 53.7
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 5.7e-31 137.9 110 50.0
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 9.7e-31 137.1 118 53.4
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 9.7e-31 137.1 120 50.8
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 4.1e-29 131.7 123 51.2
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 1.2e-28 130.2 122 52.5
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.2e-28 130.2 109 55.0
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 2.0e-28 129.4 121 50.4
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 2.6e-28 129.0 122 51.6
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 4.5e-28 128.3 127 46.5
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 4.5e-28 128.3 114 46.5
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 5.9e-28 127.9 104 53.8
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 1.0e-27 127.1 118 48.3
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 1.3e-27 126.7 127 46.5
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 1.3e-27 126.7 111 49.5
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 2.9e-27 125.6 127 48.0
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 2.9e-27 125.6 124 47.6
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 5.0e-27 124.8 115 50.4
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 1.1e-26 123.6 123 45.5
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 1.1e-26 123.6 95 56.8
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 4.2e-26 121.7 121 46.3
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.2e-25 120.2 109 49.5
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 4.7e-25 118.2 100 53.0
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 1.0e-24 117.1 91 57.1
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 2.0e-23 112.8 108 50.0
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 1.3e-22 110.2 104 47.1
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 8.2e-22 107.5 120 44.2
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 1.1e-21 107.1 108 46.3
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 1.4e-21 106.7 112 41.1
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 4.1e-21 105.1 105 46.7
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 6.9e-21 104.4 112 42.9
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 2.9e-19 99.0 66 63.6
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 1.1e-18 97.1 99 48.5
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 3.2e-18 95.5 71 60.6
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 3.2e-18 95.5 96 47.9
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 5.5e-18 94.7 117 45.3
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 7.2e-18 94.4 92 45.7
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 2.1e-17 92.8 109 43.1
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 2.0e-15 86.3 66 56.1
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 5.7e-15 84.7 98 44.9
FAN11G1628 Fragaria x ananassa HOM05D007994 ORTHO05D010092 1.1e-13 80.5 122 36.1
Psat7g190280 Pisum sativum HOM05D007994 ORTHO05D010092 1.8e-13 79.7 60 55.0
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 2.6e-12 75.9 78 46.2
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 7.7e-12 74.3 70 47.1
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 1.3e-11 73.6 106 42.5
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 2.2e-11 72.8 98 37.8
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 2.9e-11 72.4 71 43.7
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 1.9e-10 69.7 54 53.7
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 2.5e-10 69.3 88 42.0
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 2.5e-10 69.3 74 43.2
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 4.2e-10 68.6 52 50.0
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 4.2e-10 68.6 52 50.0
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 5.5e-10 68.2 98 35.7
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 5.5e-10 68.2 98 35.7
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 5.5e-10 68.2 98 35.7
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 7.2e-10 67.8 71 43.7
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 9.4e-10 67.4 71 42.3
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 2.1e-09 66.2 73 39.7
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 2.1e-09 66.2 73 39.7
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 2.1e-09 66.2 89 42.7
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 5.2e-08 61.6 88 36.4
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 6.7e-08 61.2 59 40.7
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 1.2e-07 60.5 61 47.5
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 2.6e-07 59.3 62 37.1


User provided reference genes

Program Settings